Os04g0398600

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0398600| Description = Similar to Pectin-glucuronyltransferase| Version = NM_001059208.1 GI:115458145 GeneID:4335711| Length = 4068 bp| De...")
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Gene Name

Os04g0398600

Description

Similar to Pectin-glucuronyltransferase

Version

NM_001059208.1 GI:115458145 GeneID:4335711

Length

4068 bp

Definition

Oryza sativa Japonica Group Os04g0398600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19711580..19715647

Sequence Coding Region

19711770..19711887,19712660..19713048,19713239..19713480,19713565..19714078

Expression

GEO Profiles:Os04g0398600

Genome Context

<gbrowseImage1> name=NC_008397:19711580..19715647 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19711580..19715647 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcaagaacggtggggtggtggctactggcggcggccgtcgtgctcgccgcggcggcggcggattccggggaggcggagcgcgcggcagagcagcacagcgagcgcatctcagggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatctatgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatcacatgtttgctgcagaaatattcatgcatcgcttcttgctctcgagtgctgttcggacactcaaccccaaggaggctgattggttttacacgccagtttatactacttgtgacctaactccggctggactgcccttgccatttaagtcgccgagggtgatgaggagtgcgatccagtacatttcgcacaagtggcccttctggaatagaacagatggagcagaccacttctttgttgtcccgcatgattttggtgcatgttttcactatcaggaagaaaaagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtccaaacatttggacaggagaaccatgtttgcttaaaagagggttctatcactataccaccctacgctcctccacagaaaatgcaggctcacttgatcccccctgacactccacgttcaatcttcgtctacttccggggactattctatgacactggaaatgaccccgagggtggttactatgcaagaggggcgcgagcttccctatgggaaaacttcaagaacaatccattattcgacatttccacggatcaccctcccacctactatgaagacatgcagcgtgctgtcttctgtctgtgcccattgggctgggcaccatggagccctaggttggttgaggctgtggtctttggctgcattccagtcatcattgctgacgacattgtgctaccatttgccgatgcaatcccttgggaggaaattggcgtgtttgttgaggagaaggatgttccaaagttagacaccatcctcacatcgatgccaatcgacgatattttaagaaagcaaagattgcttgcaaatccatcaatgaagcaggccatgttgtttccacagccagcccaaccaagagatgcgttccaccagatcttgaatggccttgctcgcaagcttccacacccagagggagtatacttgcaacccagtgacaagcgcctcaactggactgctggacctgttggagatctgaaagcttggtag</cdnaseq>

Protein Sequence

<aaseq>MGSRTVGWWLLAAAVVLAAAAADSGEAERAAEQHSERISGSAGD VLEDNPVGRLKVFIYDLPRKYNKKMVNKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPK EADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYISHKWPFWNRTDGADHFFVVPH DFGACFHYQEEKAIERGILPLLQRATLVQTFGQENHVCLKEGSITIPPYAPPQKMQAH LIPPDTPRSIFVYFRGLFYDTGNDPEGGYYARGARASLWENFKNNPLFDISTDHPPTY YEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVE EKDVPKLDTILTSMPIDDILRKQRLLANPSMKQAMLFPQPAQPRDAFHQILNGLARKL PHPEGVYLQPSDKRLNWTAGPVGDLKAW</aaseq>

Gene Sequence

<dnaseqindica>191..308#1081..1469#1660..1901#1986..2499#atccttgctccacgtcccaatctcctcctcctcctcctccccacttcttcttctttgttttttctctttttttttcccgaattcccagaccaaatctcctcgctttttgcttcgttctccgctccggtgacccggaggaggcggaggttggagaaagtttgcgcctttgcggtgagtggtggtgtcggtgatgggatcaagaacggtggggtggtggctactggcggcggccgtcgtgctcgccgcggcggcggcggattccggggaggcggagcgcgcggcagagcagcacagcgagcgcatctcaggttatctctctcaagaccgattttttctttctttttttttcacatagaaaagaggggtgcttttttagatgctgggaaccttgatgtgtgctgatgctattaaccaagatgtgtggtggtatgatttgcttaatctagtgtgccgatttgggaggagggtatgttagttcttggctgttgcttggagttgagaggacttaggtcaatcgtttgcaggctatctgagattcagttggagatctcttcttgtgccatccattgtattccttttttagtttacagtccaagtatgttactgtcaaagttgtggcctatgtgcatcatcatcatcatccccatccactgcaaagttccaagctgaggttgtaggttctattggtggttgttccccgtttccttgttaattttcttgattttgttacctccctgccgctaagattgcttatgcggtaacatgcaatttttgatggtgatatttgttcctttgattggatttcatggatccaacaagaggaacataactcaatcacaaatttgatcaaatccaagtagcaccgtgccgttccatggttcaattcatcatgttcaagtgataagtacttcacagctctcaagaaagtgataaaacacttaacttggtattactgctggtatagtttcacaaatatagttaagagtcttagagatgggttcatgcttcgttgctgtgaaacttaattgtttcatatttagcgattgtgttatttctaaaccatcaattgttaaattgtagggagtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatctatgacctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatcacatgtttgctgcagaaatattcatgcatcgcttcttgctctcgagtgctgttcggacactcaaccccaaggaggctgattggttttacacgccagtttatactacttgtgacctaactccggctggactgcccttgccatttaagtcgccgagggtgatgaggagtgcgatccagtacatttcgcacaagtggcccttctggaatagaacagatggagcagaccacttctttgttgtcccgcatgattttggtgcatgttttcactatcaggtgtgtgctaattcccttggcatctcacatttggatttgtctgtgtgtaattctctttctgatttcattgtttactttggagtttggacatacccttttagatgtcaacgctaaggataaaacattattttgaccttttctactcacaagttctgaagtagtgttattaactgttgtatactatttgtaggaagaaaaagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtccaaacatttggacaggagaaccatgtttgcttaaaagagggttctatcactataccaccctacgctcctccacagaaaatgcaggctcacttgatcccccctgacactccacgttcaatcttcgtctacttccggggactattctatgacactggaaatgaccccgagggtggttactatgcaaggttagcaatgtttttaaagtaacagatctgaatttttatccttctggttttgtcccatgtactcacttcagtgatgttatacagaggggcgcgagcttccctatgggaaaacttcaagaacaatccattattcgacatttccacggatcaccctcccacctactatgaagacatgcagcgtgctgtcttctgtctgtgcccattgggctgggcaccatggagccctaggttggttgaggctgtggtctttggctgcattccagtcatcattgctgacgacattgtgctaccatttgccgatgcaatcccttgggaggaaattggcgtgtttgttgaggagaaggatgttccaaagttagacaccatcctcacatcgatgccaatcgacgatattttaagaaagcaaagattgcttgcaaatccatcaatgaagcaggccatgttgtttccacagccagcccaaccaagagatgcgttccaccagatcttgaatggccttgctcgcaagcttccacacccagagggagtatacttgcaacccagtgacaagcgcctcaactggactgctggacctgttggagatctgaaagcttggtagtgagcagcttccctctccttggacgatccttgtatgaaaacctcgtagggtcagtcatcagttcatacttcctgaaatgtgatgtaatcaacgtgcagtgccgggtgtaatgtacaccttggccttatctaacttaatgaatctttgtaagttagtaaattttgaaagaaatgaaaattgtatcgttggaatcagaatggcaagttagatcagtggttattttggttgccaagtttttgcagcataccctcatacatatattggcgaagaactggtggcaagaatgctgaactgcacatcaggtaagtcacaaggttgtaagtaacattagatgaatgaagatgtacatttttcatgtttttggacagatatgcttagattctgccttttacggatacatccatgctattttgcaagccatgtaactgatttataattaatgcagcctctccggtggttccatgacgatcatcgcattactcgttatcatcatcagccaggtcgaactgcttgagcagcgcgccgcagatgggcagtgggatgtccttgaggtagccgagtgggttggctaagcgcaggttgtcacagatgccgacattcctggtgagcaaaacacgggcacgatccctttcggcctcgatttcagagcagtttgcaagggggctgtggacgaggacaacctcgcagatgtcctcctcatggctgtccttgagctcaatcttgtatgtcccggtctcatcagtcacaccgtcaatcgcacgctcgaccttgtcggtgccaaagtgcttgcactccagcctgaccttggcacctgcaatcaagagatcaggtgagccaatgctggacttctaaccaggttagcgtttcatgtttacaatttgatgcacaaactctgcagtttctttggtcttcctaagttctgctgctcatatattcggagattattcatttcagcatttgcattgcagactcctgacccaaaaaagaatttccttacccttgatatactcggtgacattggtctcgaacccggcgcggcacgtgtcacagtagacacggccttggacgacgtagtccggtgcgtcggtggcagtggcagtgctggcaaggacatagaagaggatgccgaagatcaccggaatggtgcggagagaggccatggatgatgtggctgcaaatgtgtttttccccttcctctattattatttggggaaaatgtgagaggagggtactgaaatggcctggtttggaacggattcgagctgtggtataagtaacctggggaacctggaggatttccatggctgtccttgcaagtaggaatcgttggagatgccgttgggatcgagtggctgaagagaaggcagattgttgatttgatcctacttttgatgatgaccaagctaaaaatgggtgaatgttttgacgagcgaggctattatgccgttgtgggtgttttagccagccagaaatctgtcgaattttgacgttacggaagcagcagacaacttgggaacctgaatagatttcatgttgggcgccttgaatgcagtaacttcataggatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0398600, RefSeq:Os04g0398600