Os04g0399800

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0399800| Description = Similar to Ethylene-responsive transcription factor 12 (Ethylene-responsive element binding factor 12) (EREBP-12) (AtE...")
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Gene Name

Os04g0399800

Description

Similar to Ethylene-responsive transcription factor 12 (Ethylene-responsive element binding factor 12) (EREBP-12) (AtERF12)

Version

NM_001059215.1 GI:115458159 GeneID:4335720

Length

879 bp

Definition

Oryza sativa Japonica Group Os04g0399800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19811397..19812275

Sequence Coding Region

19811397..19812275

Expression

GEO Profiles:Os04g0399800

Genome Context

<gbrowseImage1> name=NC_008397:19811397..19812275 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19811397..19812275 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaacttctcctcgtacttctactcgtcgtcggcggcggcggcgggtggtggtggtggtggtggggagaagaagtcgtcgtcgtcgtcggcgtcgaagaagaagcagcagcaggcggcggcggcggagggagggaataaccagacgaggtaccttggggtgaggaggaggccgtgggggaggtacgcggcggagatcagggacccggcgacgaaggagaggcactggctggggacgttcgacacggcggaggaggccgccgtcgcctacgaccgcgccgcgaggtcgctccgcggcgcccgcgcgcgcaccaacttcgcctacccggacctccccccgggctcctccgtcaccccctacctctcccccgacctctccgccgacgcctccgatcagctgctccagccgttctacgccaatccctccgccgccgccgcgctgcccactccggcggcggtgatggccggaggaggaggagtcgaattcggcggcgagtacatgtacggcggcggcgtcgacatgtcgtcgctgatggacgacattgcggccatgcccgacgacctcccgcccagcgtgacgggcggcggcggcggcttcgccagcagcgacgaatactccagcggcggcggcgggatggtcgacgacgtctccatgtactgcggcggcaatggcggagggtcgtcgtggtgcgacgcctccgacttcgcctcgtactcgtcctcctcgccggcggcggcggcggcggcaggctcgcacgggatgtacttcgaggaggggtacgtgcacagcccgctcttctcgccgatgccggccgtcgacgacgccggcgccgacgggttccagctcggcggctcgtcgtcgtcctactactactga</cdnaseq>

Protein Sequence

<aaseq>MMNFSSYFYSSSAAAAGGGGGGGEKKSSSSSASKKKQQQAAAAE GGNNQTRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARSLRGAR ARTNFAYPDLPPGSSVTPYLSPDLSADASDQLLQPFYANPSAAAALPTPAAVMAGGGG VEFGGEYMYGGGVDMSSLMDDIAAMPDDLPPSVTGGGGGFASSDEYSSGGGGMVDDVS MYCGGNGGGSSWCDASDFASYSSSSPAAAAAAGSHGMYFEEGYVHSPLFSPMPAVDDA GADGFQLGGSSSSYYY</aaseq>

Gene Sequence

<dnaseqindica>1..879#atgatgaacttctcctcgtacttctactcgtcgtcggcggcggcggcgggtggtggtggtggtggtggggagaagaagtcgtcgtcgtcgtcggcgtcgaagaagaagcagcagcaggcggcggcggcggagggagggaataaccagacgaggtaccttggggtgaggaggaggccgtgggggaggtacgcggcggagatcagggacccggcgacgaaggagaggcactggctggggacgttcgacacggcggaggaggccgccgtcgcctacgaccgcgccgcgaggtcgctccgcggcgcccgcgcgcgcaccaacttcgcctacccggacctccccccgggctcctccgtcaccccctacctctcccccgacctctccgccgacgcctccgatcagctgctccagccgttctacgccaatccctccgccgccgccgcgctgcccactccggcggcggtgatggccggaggaggaggagtcgaattcggcggcgagtacatgtacggcggcggcgtcgacatgtcgtcgctgatggacgacattgcggccatgcccgacgacctcccgcccagcgtgacgggcggcggcggcggcttcgccagcagcgacgaatactccagcggcggcggcgggatggtcgacgacgtctccatgtactgcggcggcaatggcggagggtcgtcgtggtgcgacgcctccgacttcgcctcgtactcgtcctcctcgccggcggcggcggcggcggcaggctcgcacgggatgtacttcgaggaggggtacgtgcacagcccgctcttctcgccgatgccggccgtcgacgacgccggcgccgacgggttccagctcggcggctcgtcgtcgtcctactactactga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0399800, RefSeq:Os04g0399800