Os04g0403200

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Revision as of 11:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0403200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001059231.1 GI:115458191 GeneID:4335736| Length = 168...")
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Gene Name

Os04g0403200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001059231.1 GI:115458191 GeneID:4335736

Length

1682 bp

Definition

Oryza sativa Japonica Group Os04g0403200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20015449..20017130

Sequence Coding Region

20015543..20015604,20015685..20016108,20016203..20016760

Expression

GEO Profiles:Os04g0403200

Genome Context

<gbrowseImage1> name=NC_008397:20015449..20017130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20015449..20017130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtgcaggcgcagtacctctcccacgcctccttcccccacgacctctatggcctcagggctctggagggtgcgacggcggcgggttctttgttcttggacgaccacggcgggtgcgcgccggcgactccggcggcggccgcggctgggatagggcacacggtgctgagcgaccttccccggagcgagcttacctgcaacgacaataacggcgcgggatacggattcgtgccgaggaagagggcgcgcctggatgcggatgagtcggccggggcgttgatggcggcggcggcggcgcagcagcagcgcatggttcttccgccccatggccttgtctttcccggggatgtgcagagcagggcggtgggttgcggcgccgcgtccaccagcgggagggctggcaatgccgccggcctctcgcaggggctcctgtctcagctctatcatcagggtgtcgagatcgacgcgctcgtgcgactcgagagcgagcggatgcgtgcggggctcgaggaggctcgccggcgtcacgtacgggcggtggtgtccaccgtcgagcgcgccgcggccgggcgtctccgtgccgcggaggccgagctcgagcgcgcgcggtgccgcaacatggagctcgaggagaggctgcgccagatgaccgccgaggggcaggcgtggctcagcgtcgccaagagccacgaggccgtcgccgcggggctccgcgccaccctggatcagctcctccagtcaccctgcgccgcccttgccgttgccggcgcggccggcgccggtggcgccgagggcgacgccgaggacgcgcagtcctgctgctacgagaccccgtgcggtggcgacaacgccggcgcggatgacgcggcgtccaagacccccgccgccgcgctctgcaaggcgtgcggcgccggcgaggcgtccatgctgctgctcccgtgccggcacctctgcctgtgccgcggctgcgaggccgccgtcgacgcctgcccggtgtgcgcggccaccaagaacgcctcgctccatgtcctgctgtcctga</cdnaseq>

Protein Sequence

<aaseq>MAVQAQYLSHASFPHDLYGLRALEGATAAGSLFLDDHGGCAPAT PAAAAAGIGHTVLSDLPRSELTCNDNNGAGYGFVPRKRARLDADESAGALMAAAAAQQ QRMVLPPHGLVFPGDVQSRAVGCGAASTSGRAGNAAGLSQGLLSQLYHQGVEIDALVR LESERMRAGLEEARRRHVRAVVSTVERAAAGRLRAAEAELERARCRNMELEERLRQMT AEGQAWLSVAKSHEAVAAGLRATLDQLLQSPCAALAVAGAAGAGGAEGDAEDAQSCCY ETPCGGDNAGADDAASKTPAAALCKACGAGEASMLLLPCRHLCLCRGCEAAVDACPVC AATKNASLHVLLS</aaseq>

Gene Sequence

<dnaseqindica>95..156#237..660#755..1312#tccacgactccatccgttttccatttccactcctccccccacccaactcaccatcgccattccttccctccttccaccgctccctctctcttccatggccgtgcaggcgcagtacctctcccacgcctccttcccccacgacctctatggcctcaggtaaacgcttcgttcgatcgatcgacacctcggttggttttgatcgatggcgtggtctgatattggtgtggcctgtgcagggctctggagggtgcgacggcggcgggttctttgttcttggacgaccacggcgggtgcgcgccggcgactccggcggcggccgcggctgggatagggcacacggtgctgagcgaccttccccggagcgagcttacctgcaacgacaataacggcgcgggatacggattcgtgccgaggaagagggcgcgcctggatgcggatgagtcggccggggcgttgatggcggcggcggcggcgcagcagcagcgcatggttcttccgccccatggccttgtctttcccggggatgtgcagagcagggcggtgggttgcggcgccgcgtccaccagcgggagggctggcaatgccgccggcctctcgcaggggctcctgtctcagctctatcatcagggtgtcgagatcgacgcgctcgtgcgactcgaggtacggccttgttcgagattttgatcgagcgttcgatcggttcgccgtgatgcgcgggtgtctgactcgatcgacgtctatgttggctatgcagagcgagcggatgcgtgcggggctcgaggaggctcgccggcgtcacgtacgggcggtggtgtccaccgtcgagcgcgccgcggccgggcgtctccgtgccgcggaggccgagctcgagcgcgcgcggtgccgcaacatggagctcgaggagaggctgcgccagatgaccgccgaggggcaggcgtggctcagcgtcgccaagagccacgaggccgtcgccgcggggctccgcgccaccctggatcagctcctccagtcaccctgcgccgcccttgccgttgccggcgcggccggcgccggtggcgccgagggcgacgccgaggacgcgcagtcctgctgctacgagaccccgtgcggtggcgacaacgccggcgcggatgacgcggcgtccaagacccccgccgccgcgctctgcaaggcgtgcggcgccggcgaggcgtccatgctgctgctcccgtgccggcacctctgcctgtgccgcggctgcgaggccgccgtcgacgcctgcccggtgtgcgcggccaccaagaacgcctcgctccatgtcctgctgtcctgagagccagcctggcccgcgtcgcgcgtggccaagctcctcgtcgtcgtcgtcgtcttcccccaacctctcggccgctctggcgcgccacggcggcacggcacgtgcgtcaccccacccatgtgatcttggcggacactgagcttttgttgcacgccagtagaagtcacccacaaagttgcatctagtttaggttaaatcctcttttgttattacctgtaggtttacctgtcaatgtaatcagctaaccctactttgctgtccataacccttcacccccttctacatgattagccccaacttttttgtggtaaagaaaacccccgattgtattctcgatgaaatacatgcatgcaccaggtctagccttaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0403200, RefSeq:Os04g0403200