Os04g0407800

From RiceWiki
Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0407800| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001059253.1 GI:115458235 GeneID:4335758| Length = 2700 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0407800

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001059253.1 GI:115458235 GeneID:4335758

Length

2700 bp

Definition

Oryza sativa Japonica Group Os04g0407800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20207015..20209714

Sequence Coding Region

20207224..20208326,20209665..20209668

Expression

GEO Profiles:Os04g0407800

Genome Context

<gbrowseImage1> name=NC_008397:20207015..20209714 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20207015..20209714 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgggcctcagctgccgccacgtgcggcaggcttcaaccaggaggaggtgggggcgagtcgtcgtcaacgacgacgacgaggaccacgcagatggacccgtcgtgcccgccgttcccgcagccggaggcgccaccgctgccgctgcagctgcagctgcagccgggtctgcccaggctggagctgccgacgctggacctggagcgcgtcggcggcgaggaccgggcggcgctggtggcggcctgccgggatctgggcgcgttccgcgtggtgaaccacggcgtccccggcgagctccggcggcggctgctggagctggggaagcagctgctgggtcgcgacaccttcgagctgaagaaggcgcggccgggctacttctggggcacggctgcgctgaagtcgctccgcgtcaaggaggtcaactggctggagggactccatgtcgatctcgtccccggctcgtcgtcgtcgtcgtcgcaggtcggcgatggcgatgatgatgatgatgatggctggatgcggatcagggcgctgatggcggagtacggcgaccacatggcgcgcatcgcccgcaagctgttcgacgccctggccgccgagctgggcctggatcatcaccaggcggcgtcctacctcgccgagcgccagggcttcctccgcctgtaccgctacccgccctgcccttcctccgcctcctgcctcgggatggagccccacaccgacagctccgtgctctccatcatcctcggccaggaccacgtcggcggcctgcaggtgatccgcgacggcgcgtggcgcgacgtcgcccccgcgcccggcgagctcctcgtcaacctgggcgacatgatgacggccatcagcggcggctcgtaccagagcgtgcgccacagggtgctcgcgagccgcccctccacggagagggtgtcgtgctgctacttcgccttcccgcaggaggacgccgtcgtcgaggcccccagcggcatcggcggcggcgtctacaggcccttctcctacagggaattccgcgagcaggtgcaggccgacatcaaggccgtcggcaccaaggtcggcctcagccgcttctatgcgacggctaccaggtag</cdnaseq>

Protein Sequence

<aaseq>MGWASAAATCGRLQPGGGGGESSSTTTTRTTQMDPSCPPFPQPE APPLPLQLQLQPGLPRLELPTLDLERVGGEDRAALVAACRDLGAFRVVNHGVPGELRR RLLELGKQLLGRDTFELKKARPGYFWGTAALKSLRVKEVNWLEGLHVDLVPGSSSSSS QVGDGDDDDDDGWMRIRALMAEYGDHMARIARKLFDALAAELGLDHHQAASYLAERQG FLRLYRYPPCPSSASCLGMEPHTDSSVLSIILGQDHVGGLQVIRDGAWRDVAPAPGEL LVNLGDMMTAISGGSYQSVRHRVLASRPSTERVSCCYFAFPQEDAVVEAPSGIGGGVY RPFSYREFREQVQADIKAVGTKVGLSRFYATATR</aaseq>

Gene Sequence

<dnaseqindica>210..1312#2651..2654#gaatctgctgatctgctctacatcatcaatttttcaagctcggttttcaaacatctgtaccgcaccgtccgaaatttcacttttggcagcaattgaatggccttttggcagatcctatcatactgcaaaacgagtagggcagaaacgactacgggccgggcctggccgccatctcactaatgggctgagatggaggccgtaggcttctgatgggctgggcctcagctgccgccacgtgcggcaggcttcaaccaggaggaggtgggggcgagtcgtcgtcaacgacgacgacgaggaccacgcagatggacccgtcgtgcccgccgttcccgcagccggaggcgccaccgctgccgctgcagctgcagctgcagccgggtctgcccaggctggagctgccgacgctggacctggagcgcgtcggcggcgaggaccgggcggcgctggtggcggcctgccgggatctgggcgcgttccgcgtggtgaaccacggcgtccccggcgagctccggcggcggctgctggagctggggaagcagctgctgggtcgcgacaccttcgagctgaagaaggcgcggccgggctacttctggggcacggctgcgctgaagtcgctccgcgtcaaggaggtcaactggctggagggactccatgtcgatctcgtccccggctcgtcgtcgtcgtcgtcgcaggtcggcgatggcgatgatgatgatgatgatggctggatgcggatcagggcgctgatggcggagtacggcgaccacatggcgcgcatcgcccgcaagctgttcgacgccctggccgccgagctgggcctggatcatcaccaggcggcgtcctacctcgccgagcgccagggcttcctccgcctgtaccgctacccgccctgcccttcctccgcctcctgcctcgggatggagccccacaccgacagctccgtgctctccatcatcctcggccaggaccacgtcggcggcctgcaggtgatccgcgacggcgcgtggcgcgacgtcgcccccgcgcccggcgagctcctcgtcaacctgggcgacatgatgacggccatcagcggcggctcgtaccagagcgtgcgccacagggtgctcgcgagccgcccctccacggagagggtgtcgtgctgctacttcgccttcccgcaggaggacgccgtcgtcgaggcccccagcggcatcggcggcggcgtctacaggcccttctcctacagggaattccgcgagcaggtgcaggccgacatcaaggccgtcggcaccaaggtcggcctcagccgcttctatgcgacggctaccaggtactgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgattgttaggtaatcgtcacctccacaaagagcgactcgctgtataccgttggcatgctagctttatctgttcgggcaatacgatgcccattgtacttgttgactggtctgatattcgtgagcaaaaacgacttatggtattgcgagcttcagtcgcactacacggtcgttctgttactctttatgagaaagcgttcccgctttcagagcaatgttcaaagaaagctcatgaccaatttctagccgaccttgcgagcattctaccgagtaacaccacaccgctcattgtcagtgatgctggctttaaagtgccatggtataaatccgttgagaagctgggttggtactggttaagtcgagtaagaggaaaagtacaatatgcagacctaggagcggaaaactggaaacctatcagcaacttacatgatatgtcatctagtcactcaaagactttaggctataagaggctgactaaaagcaatccaatctcatgccaaattctattgtataaatctcgctctaaaggccgaaaaaatcagcgctcgacacggactcattgtcaccacccgtcacctaaaatctactcagcgtcggcaaaggagccatgggttctagcaactaacttacctgttgaaattcgaacacccaaacaacttgttaatatctattcgaagcgaatgcagattgaagaaaccttccgagacttgaaaagtcctgcctacggactaggcctacgccatagccgaacgagcagctcagagcgttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtaccaggtagtaacaaggtagaagatgtgctgctgcattgtgtaggatattgtagt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0407800, RefSeq:Os04g0407800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os04g0407800&oldid=15943"