Os04g0408900

From RiceWiki
Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0408900| Description = Similar to DNA-binding protein S1FA| Version = NM_001059257.1 GI:115458243 GeneID:4335762| Length = 2033 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0408900

Description

Similar to DNA-binding protein S1FA

Version

NM_001059257.1 GI:115458243 GeneID:4335762

Length

2033 bp

Definition

Oryza sativa Japonica Group Os04g0408900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20250988..20253020

Sequence Coding Region

20251254..20251268,20252630..20252845

Expression

GEO Profiles:Os04g0408900

Genome Context

<gbrowseImage1> name=NC_008397:20250988..20253020 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20250988..20253020 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggatcagtcgaacaacatgatcatcgaggaggtcaacaagggcctgaaccctggaacgatagtccttcttgtggttgcaactctcctgattcttttctttgttggaaactatgcgctctacatgtatgctcagaagacgcttcctcctcggaagaagaagccagtctccaagaagaagctgaagagggaaaagctgaagcagggggtttctgcacccggagagtga</cdnaseq>

Protein Sequence

<aaseq>MADQSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMY AQKTLPPRKKKPVSKKKLKREKLKQGVSAPGE</aaseq>

Gene Sequence

<dnaseqindica>267..281#1643..1858#acgaacgagcatgagcagcaagcggtgacagagcagatcacgcgagcttgtcgccaagggggggaggaagagaagtgagaaatccgcgccaagaagcgagaggtgaggacggcgggcttaatccactgtggagatctctcacttccacggggtctcttcttcctccgagaaattcttctttggctaaagccgctgatctaattttcttttcgatccacagaggtccgcagctggtgtcgtctggtgctgcgggtatcgtcgctgccatggcggatcagtcggtaaggatctgcgagctgtttctgtttaatctcttggttttaggggtgcgaaaccttcgacgtttcggttgtttgaccggatctcgacgcgtttttacggcggatttgcttttgtctggaatttgcttgtgttgaccctagcttctcttgtagatctggaagaagctcttctcttaatttcagagccttaactaatacaagtaacagtttgtttgttccccccaaaaactgaacccccatgtcccaagttggatcagtcccctggcgtggatagttagatctgtagaatttgcgctgtagtttttgcatggtcatacattttgttacatctcggtaaattttatggttgttccgtttcctcttcagttttttgtttttttagctgtgtcctatcatcatcagcctctaatctgaagcaaattggctggtagactagatatgaaaccaaagttgagccacatgaaccaactcaaaaaggaaaatatcccctagctgaatgattaaattgctacctgattaggttagtgtgtctggttgtgtataacgtgtttcaagaattgacatcactagataattttactcttgccggtctgctgaattgctattttatttatgatacatacatgatcgtttaatcgttgcttaatttaactttgtcctcatggcattcatgactaccttttcattagtgtagttccgttcaataaataattaagagcacaattgtgtgctctcatttggagtgttttataatttatgttctgtgaatccactggaactgtatgttggcatgattgcctcttttaaatgtatatgttcttgctttcaaacactttcaggtgttctgaacacttgtgtcttgttgttctgtatgcatccttatatcagttaaccgtcatatctttctctgaatggcaaacctttacacacattctatttcgttttggctgacctcggactagtttttggaatcttacttataggctagttgctagtgtagaaaacatgtaaatgtatgaaatgtcagactcaataatgtattaaaattaagcttcgtctgcgcagtgataaatctgtatgaataaagggtaacagatatgtagtggaactgaacagtccatattgaacataatttgtcgacatgctctgttgacatgcttagacatgctgatctgtgaagtcagcttttgggtttcccatgtgtacaaaagggtgtacatgtctgctctaatttgttcatactaaccttgtaatatataagtttgaagggttaactattttgatttttccagctacctaaatcgcaattatattttcaatctttagggtggtttctgatagtttatttttttgttcttcagaacaacatgatcatcgaggaggtcaacaagggcctgaaccctggaacgatagtccttcttgtggttgcaactctcctgattcttttctttgttggaaactatgcgctctacatgtatgctcagaagacgcttcctcctcggaagaagaagccagtctccaagaagaagctgaagagggaaaagctgaagcagggggtttctgcacccggagagtgaagagattcgtcagtttaccaatgttactgattttatcctgagcttcttttgcatgataagaattatcagctggagcggcagtgtttacagtaactatgttatgtagaagctttgtcctaagtggtttacatttgtattagacgccttatttgagcaatctgttgaacagcactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0408900, RefSeq:Os04g0408900