Os04g0412000

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Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0412000| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001059271.2 GI:297602682 GeneID:4335777| Length...")
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Gene Name

Os04g0412000

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001059271.2 GI:297602682 GeneID:4335777

Length

5117 bp

Definition

Oryza sativa Japonica Group Os04g0412000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20370748..20375864

Sequence Coding Region

20374435..20374683

Expression

GEO Profiles:Os04g0412000

Genome Context

<gbrowseImage1> name=NC_008397:20370748..20375864 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20370748..20375864 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcatatcatggactgagactgaaactggtgcaggagctggcgcaagagctgggcatttaccagctgtccttcgatcggccggggtacgccgagagcgacccaaacctggcaagtacagagaagagcatcgccctggacatcgaggagctcgccgacaacctgcagctgggccccaagttctacctcatgggcttctccatgggcggcgagatcatgtggagctgcctcaaacacatctcacacaggtaa</cdnaseq>

Protein Sequence

<aaseq>SYHGLRLKLVQELAQELGIYQLSFDRPGYAESDPNLASTEKSIA LDIEELADNLQLGPKFYLMGFSMGGEIMWSCLKHISHR</aaseq>

Gene Sequence

<dnaseqindica>3688..3936#gttgttgctgttgcttggctcctctcttctcccactccctcgcgaactcgatcgcttgctgcctttgctggccttggcaaccgccgcatggcggcctccggcgtgaagcggccaccgaggccggccccggcctcctccggcggtgcgtgcaatctctctctctctctctctctctctcgttagttctctgtatgcgcgtgtctttcttcaggctcgtgtttgggcggccggttggttctctgctcctgctgatagtgcttgttcttgtgctactacggtttgattttgcgagttttgctcggtggcaaaagctagtcgtctgttcgttttctacgggcaggctagtggctgtgaattggttttgctcgaggtagagcgtcaaccgacggaattgttcattgtctcgaaaagaaacaacagaattgttagagcaaacatgtctttgtgtatatgtgttctgctcaaagtaactcgcctttttttttctagctttggttttatcgtgctgctctgcttggccgaagtgctttcttggccattgagagtgcgacaaatacgtgatatctttgcagttgttcattttagagaacttcttattagatagaaagatctggttgtggttactgacttacccggctaggaaaattgtttgttatcttcgagctgaacatggaggaggtgccgagaggtacgatcgcaaatcacgcctccagactcttggacgagcacactcgattagatcttgatctgcagttcgtagcagtacctgttgattattcaacaaactggaacaagctactagtaggagtattatttatgaccaccattgcacatcaccttattgattagtccatgtatgtacgtgggggaccgagttgactatggatggagtgatgaacttgggcctgaaaatggcattccaagttgatattatttgtttagttttgctctaaactttcttacatgctgataaaatgatactccaagtcctatggttaatcttttttggaacatctttatcccaacatcattttctttgcgggagccgtcatcatgctttcagactctactaattaatctgcaaagtgtttttacaattatccctcgctacaatattttaaagtcatttttttagataatgaaatattaaattcactttcctttcgatgttctttttattacatttttttagcagtacatatttctgccactgtcagctttatcaatcttggtgaccatgtattttctttacagatatgtatcgaagaagtcataagtagatttttttgctatttccaaaggaagaaattagctgtgtgtttagttcatgctaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttagaagtttgtgtgtgtagaaaagttttgatgtgataaaaaagttgaaagtttgaataaatagtttggatctaaacaaggcctggtgtgttcttcttgacattttctcagctgtagaggtacaaaaggtgtgcgcttttgactctagaactgaaccgaatgatccatgcagttgattgtgacttgataggatagtgaattagtattgtactacatctgtcccattttaagtgtagttgtatattttaagtgtagttgtatgttccgtatccaacatttgaccatccgtcttatttcgaaaattcatgaaaaaattaaaaaaatagtcacacataaaatattatttatgttttaccatctaataacaataaaaatactaatcaaattttctttttagataagacgaacggtcaaatgttagatataaatagtgtaaaactacagtctttctaggacggaagtagtatgttttagtccttggactggccacatgttgagaaacgcccatagatcttctggctagcttcacaaggtggtgggctagacaatctggattcgaagcctcaccccttctaattatttgatattatgttcttccttaatatttgcgtcatttttggactggccacatgttaactctgtgcctgatcatcattcacttgaacagctgtaagctacaacagattcatcgtaatagattgtgtcttattttaaattaggttaggttatttttgcgacagaatgagtaagtatcatgatttattgatctgcatgagcagatcatttgtctgttagtagtgttagacaacctgtatgtatcattaaaagaatattgaattttctttgttatgtcgccttgttgtggtatgaaaaaacatgcagtacattattgatcctcttgttgtatacttcattcgttgtataagtaagcctagtgcaagatataacatatctaatacgatgaatatgaataatacattatatactcctattagtaaatctagagagaaaaattgttgtaaaatctattttttgtgcactttacctgaatgtaggttatatgtacctgggtgtaagtgatatgtaactgagtataactataagttgggtatgcaagaaaataaattctgatataagatgttacggaccaaaacttgaaagataggaatgaaatagcaaactcattttttttatggaccgagggagtatggattattcgaacatatattagttgtttagtccatgtggcggttgatttgactatgggtgaagatgaacgtgcgctatattatatagactgacggtccgagctcacatgctatgttgctttgtcctttgctatttatcttcttcttgggtaacatatgcaagtagttatagtagactttaggaatctgtcaattgtttgggatattctccttactggaatatttaatagaagtctgaatatctgataaactgatgaggccatgagggcctctttgctatttgggagctctgacgacacggttgactaggaactatcaaggatcaggatgtattggtagttttggtttgcaagcagttcaatacagatgtcaatatatcattgcaattcgattaagcctatcatctttaatttagttttttttacgctgatctttaatttaactgaaagcctaagttcagaaatagacgtatctcttcaactcacataaaagtacagctgtacagtctattcaaagctgcaacacaaatcaactaaaattgctcatcaggttttttcctgttcagtgcataattttcaaaccaattcctagttacgtagtggaaaatggatatcgtgacacagtgtcagtttgacatgttacctgtgtatcactttcagtaaggaagctcattctagctctggccgtgttcttgccggcgctgctgtacagtcagctccagcctccgcctccgaagatctgcggctccccgggtggccctccgattacagggacaagaacacggctcaaagacggtaggtatttggcctacctggagtccggcgttccaaaggagcaggccaagtacaagatcatctttgttcatggtttcgactcgtgcagatacgatgcactccctatttccccggtaaagatactggcacttacctatcttgttcatttttcaagtctgaacactttaaacagtctggttaaaaactactccctccgttccaaagtattaacatttagtcatttacggtatatcttgaaactgggggaagaatacagtgtatttagttatgtttcagatttcagagcatagtgatacatgatcatgatgatcatatcatggactgagactgaaactggtgcaggagctggcgcaagagctgggcatttaccagctgtccttcgatcggccggggtacgccgagagcgacccaaacctggcaagtacagagaagagcatcgccctggacatcgaggagctcgccgacaacctgcagctgggccccaagttctacctcatgggcttctccatgggcggcgagatcatgtggagctgcctcaaacacatctcacacaggtaattagcttgtgttatcactgttcttacttcagctgatcagcgttttcttctctgaaaaatctatggcaggactgcaaatttctgaactctgaccaatgtgtttattcatgcaggctcgccggggtggccattcttgcccccgtgggcaactattggtggtccggcttgccgtcgaacatgtcgtggcacgtctggaaccagcagctcccgcaggataagtgggcggtctgggtctcacaccacctgccatggctcacctactggtggaactcccagaagctcttccctgcctccagcgtcatcgcctacaacccggctctcttctctgaaggagacaagctcctcctgtccaagttcgccttccgaacctacatggtaaggatcactggattacttcatcacgttgcattgcatatttgcttgtaactggcgttttgctcatcggtttgcgtgtcgttgtcgcagccgcagataaggcagcagggggagtatggctgcctgcaccgcgacatgacagtcggattcgggaagtggagctggagcccactggagctcgaggacccgttcgccggcggcgaagggaaggtgcacctgtggcacggcgccgaggatctgatcgtgccggtcagcctgtccaggtacctcagcgagaaactcccctgggtcgtctaccacgagctccccaagtccggccacatgttccctctcgccgacgggatggccgacaccatcgtcaagtcgctgctgctcggggatcagccacctcaggcctcctgattcgaactcctctagtgtgcttttcccgtccttcattaagtacatattgctggccctgatagttaatgagctggtcgtcagctcgtggtgacttaataagatttcccaatttaggatgattgagaaatttgccggatttctacacttctgcccgagactgttcttccccaccgtgtttgaaccgcggcctgtgtaactctaagttcaagttcgttatgggctaatcgcattaggattgcgtttcgttttcgtttggaccgagaaactatggcccataaggcttggtctggtcgggttgcttaggcacaactagaaataagtccactttaactcccacaaatataggtccaatctaatttgtattcctcaactgcaatctgattattaaaatcagtgtattttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0412000, RefSeq:Os04g0412000