Os04g0412200

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Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0412200| Description = Similar to Ferredoxin I| Version = NM_001059273.1 GI:115458275 GeneID:4335779| Length = 3585 bp| Definition = Oryza...")
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Gene Name

Os04g0412200

Description

Similar to Ferredoxin I

Version

NM_001059273.1 GI:115458275 GeneID:4335779

Length

3585 bp

Definition

Oryza sativa Japonica Group Os04g0412200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20387948..20391532

Sequence Coding Region

20390893..20391351

Expression

GEO Profiles:Os04g0412200

Genome Context

<gbrowseImage1> name=NC_008397:20387948..20391532 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20387948..20391532 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaacaactaccgtcaccacaccaattctctgcaacctcagcgccaagccacgcgacaccctgcgcctgccgacgacgcgttcgccgaacgacggcacgaggcgaacgacgctccacctgagctcgtcaagagcccgcggcgacttgatccgcgccgccgccgccgtctacacggtgaagctcatcgggccggaggggcaggagagcgtgatcaaggtgccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcgagggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggctacgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggaggcagacctgtattag</cdnaseq>

Protein Sequence

<aaseq>MATTTVTTPILCNLSAKPRDTLRLPTTRSPNDGTRRTTLHLSSS RARGDLIRAAAAVYTVKLIGPEGQESVIKVPEDTYILDAAEEAGVDLPYSCRAGACST CAGKVVEGGVDQSDQSFLDDAQVGAGYVLTCVAYPTANSVIQTHKEADLY</aaseq>

Gene Sequence

<dnaseqindica>2946..3404#actctaatccgaaacacaaccacccgtgagtccgtcaccgctcctgctcccagtagtccagtactctcgctccactctcctcgccgagtcgccgtcgccgcctcggccagcttcggattgggttccagcaccggggcggataatctgctgctgctgctgctgctgcaaggtcagtctcgcgcgcgctcccttccccgggttgatcaccgcgtgcggcgccttggtgacgtgaaagcgatcccgcgcagcattacgtagttttaattaattctcttgtgtacttcacgctagcttcttgcgggtagtctcgatttctgtttccgtttctgcttccgttcttttctccttttggacgaatgcgctgcttcctgtggtgagagcaaaaggctctggttgcatgacttgcatccaaatctgagtaatttagacaatgtatgcagatcttctagcagcctggaccctagagggggatactatatacagtgcagttgtttgtctgtgagactgtgaaactgttttttgaagggagttatctgtgtaaatgtataatcatttcattctgaactggtcatgacatctgttgaacatcgcaaatgtggagtaagaccagttgggtcgaacttgtaagtttagtaaccaactgaagcctatagattaggtagcctcatgtatgctcttctccatatgattcatacgggtggccctcgtagctccagtttcgttcttctgtaggtgtccaaatctgaaaaaagaaaaaaaaataccatacatgcagttctttcagtatcttaattaaagggggttactgcattgtagttcttcagcttgccctgaattgctccacatatactccattcactcggcatgccatctgtcaaacacggcaaatctgcagacaagcacttggacaatcagttgtgtcgaacttgctaatatggtagtgatcatttcggggttcacttataacaatatcaaatcacttaggccctctttgtttaggtttagggttattggtttagacttttaagtcagcttattggcttacatgatttataagtcagtggatttaatgttctaagtttagtgctagagttatacatctacctcatataagccaaaaaagtttctccaacgtaacttttggcttaatagtgttatagtggtttatggctttaaaaaagtcaaacgaaaaagctacttgtttatttagatttagactttttggcttataagcctaaacaaagagggccttagagggtatccgatttttttttataaaaaaaaacattgagagggaatccgaagctgctgtagtttttagtgctacactgccattttgtggtaccaaaatttgcattggcatctccttattaagaactgtaaaatatctttacatagtaatatggagaaatgctgcaaatacttaacgtttgcttgtgaaagtcccaaagttgccatccacacccttattgcaagtacttgtggcaaaggatttttttttcatcgctatctttatactgctagctagtaagtttctaaaagcttggtattattagaatgtattaaagtggatgtaagtggggatgacaatgaaccacgtagagcttcccacggaaatggaacagactgttcattactaccaacttcaacttgatacgtgatgcgtcatgcacctttgatccaatccatatccaaatatatccgaatggcagttgggttggattaaattagttttatttctgcatcaggtagttgactgtaataccattatctgcagttcaagtttgtttctaacaatggcttgcacagcaacacttcctcaaagagctgataattttttttccttgaaaaattaaaattattgcaattcgagaaaatgtagctgtgcatccagcttctaatgttacaactgttattcataacttctaatactctgtttgaatttaatactagtgagaaagatccagggaagagtttatgtatatggatttgctagcgatgaatgtgacaagattagatatctcatcaagagacatttctctgtatatttcctgctaagattgttggaaaaccaaagttgggtgttaatccttgctttcagaagtactctttatccagaaataagaacacggtagcttgggcatccaatagctattcagtgaacacaatttgtcttgttcgacagtacaagaactttacacctttttaagcattgtgaccattgaaattatttttaaaaagtaaagcaggatctccactgtgaccattgtgacctttttaacggagggagtatttacttccttcctttcaaaattttttttgttcctttcaaaaattagtatttgcttcccagaaggtttcagtttcttccttgaccattggcttgtcaaattcttttcagtgctttcctactatgatgctctgccttctttttttctgctctgccaaatgtttgttcttccaactgaaacgtgaaaaaatgttggttgaaagaagaaattacgttggaatatgggcgttcagagttcagttctgtacatcctgagacaagaaattatttattagtagaaggttcatattaatcgtctgccagctgatctactgaatgcaattatttacggagttgctagaaatatggtgctatatgctacagtcgattttttttcagccacttacacagtagttacacctcatttacaccccatttacatatgtaattagtatgtaattttcgaatttacatatgtaattttagtacttacatatgtaattttgagacttacattgtaaatacactaaaattacatatgtaattagggacttacaatgtaaatacatgtcgactattttttttgatggaaaatatggcgccataaatatagcatctcctctcttgcttctgatcaccattatttttcaggtctcgaatacccagacttcgagagatggcaacaactaccgtcaccacaccaattctctgcaacctcagcgccaagccacgcgacaccctgcgcctgccgacgacgcgttcgccgaacgacggcacgaggcgaacgacgctccacctgagctcgtcaagagcccgcggcgacttgatccgcgccgccgccgccgtctacacggtgaagctcatcgggccggaggggcaggagagcgtgatcaaggtgccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactcgtgccgcgccggcgcgtgctccacctgcgccggcaaggtcgtcgagggcggcgtcgaccagtcggaccagtcgttcctcgacgacgcccaggtcggcgccggctacgtgctcacctgcgtcgcgtacccgaccgccaacagcgtcatccagacgcacaaggaggcagacctgtattagttagctagctgcgttgcacttgatgatttgatccatcactttcgatgcaatcttgacactgtggtttgcacatgcacttgccgttgaaactagccagaatttatcgtcatcttccacttggattgagttaagtgtacgttcttgtctctgcattgttctcaatggatatctcggaatctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0412200, RefSeq:Os04g0412200