Os04g0414000

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Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0414000| Description = Protein of unknown function DUF1022 family protein| Version = NM_001059286.2 GI:297602686 GeneID:4335794| Length = 5...")
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Gene Name

Os04g0414000

Description

Protein of unknown function DUF1022 family protein

Version

NM_001059286.2 GI:297602686 GeneID:4335794

Length

5618 bp

Definition

Oryza sativa Japonica Group Os04g0414000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20469176..20474793

Sequence Coding Region

20469176..20469358,20470180..20470418,20470912..20471008,20471132..20471173,20471376..20471502
,20472195..20472307,20472379..20472442,20472534..20472627,20472709..20472817
,20473119..20473175,20473380..20473442,20474080..20474344,20474582..20474793

Expression

GEO Profiles:Os04g0414000

Genome Context

<gbrowseImage1> name=NC_008397:20469176..20474793 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20469176..20474793 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccgctgggcgggggcgggggcgggccggcgggcgcgccggagatcttcgcgggcggcacaggggcccgcggctccgtgcggcgcgccgtcgtcatcgggaacggctgcgcgggcgccgagaaccagtgcctcggcctcctccgcgccctcggcctcgccgaccgcctcacgctttaccgtgctataaggccaacaggaggaatcaacaagtggctgcacttcctcccgatctccttgcataagttagtggaccaagtactcagacagatgttttctagtaacaaatttgcaacactatttcaaggggcaaaaatggctcaatatactgtctgtaatggccagtcccttggattatcttctgtcctagaagcagataccaaaaggatagttaccatggtcaatgatacctttgagaaagaaggcctggcactagttgtcgcttgtggacgagataccatatcatatgcaagttcaataaggtgtttggctccagataatgtctttgtcatacagatacaacatcccaggtatcgccttgataggtttgatttggtggtccttactgttggcgcacttcaccaagcagattctgctgcattacgcactgctgcttctgattggcatgatgaacttgctaactcaccaaagccattggttgtagtgaacattggaggaccaacaagaaactgtaattacgatgtaggccttgccaagaagttgataagctcactacacaatgttctgaagacctgtggaagtgtcagggtttcattttccagaagaacaccacataaggtgtctgatcttatattgaaagagttcagtacacaccctaaggtttatatttggaatggtgaaggacccaacccacaccttgggcatcttgcatgggctgatgcttttgtcataacagcagactcaattagtatgctaagtgaggcatgtagcactgggaaacctgtttatgttgttggaactgagcactgcaggtggaaattctcggattttcacaacaggctgcatgaaagaggtgctgtccgccctttcactggactagaagatatgtcagacaactggagctaccctcccctgaacgatgccattgatgtggcggcacgggaatttttgagcagccacagactgcaggaagaggttttaccctttcaaaaagaaaatcaacagcgatgcgtaagcagttacagtagctgtgacggtgtgacctgtgaaagtgaaactgtgaaaaatctcaacagttgtgcaacaggacaagagcgagagaacgtgcaatcggacgacttttgtgttgggtggtcattccatgcgcagaccggctgcaggggcctcgtgcaatcgtgtgcagattcccttgggaaagggtgtccaggcggaagtgaccgttctgcccccgctgcggacgaagcaaagcgacatgcccagaatcgtcgggttgatgaactagccaaactcaagcatagccttctgaagtgccgcctaccgttgccttggaatgcagccactatcctcgagcagctcctgcgcaaccatcatcgtgcaactctcgctgctatggcaatggagtgccactggctgccacagtcctcgagcagttccaacatgggggccaggagctgcttcgctgccgtggcccgtggcccttga</cdnaseq>

Protein Sequence

<aaseq>MEPLGGGGGGPAGAPEIFAGGTGARGSVRRAVVIGNGCAGAENQ CLGLLRALGLADRLTLYRAIRPTGGINKWLHFLPISLHKLVDQVLRQMFSSNKFATLF QGAKMAQYTVCNGQSLGLSSVLEADTKRIVTMVNDTFEKEGLALVVACGRDTISYASS IRCLAPDNVFVIQIQHPRYRLDRFDLVVLTVGALHQADSAALRTAASDWHDELANSPK PLVVVNIGGPTRNCNYDVGLAKKLISSLHNVLKTCGSVRVSFSRRTPHKVSDLILKEF STHPKVYIWNGEGPNPHLGHLAWADAFVITADSISMLSEACSTGKPVYVVGTEHCRWK FSDFHNRLHERGAVRPFTGLEDMSDNWSYPPLNDAIDVAAREFLSSHRLQEEVLPFQK ENQQRCVSSYSSCDGVTCESETVKNLNSCATGQERENVQSDDFCVGWSFHAQTGCRGL VQSCADSLGKGCPGGSDRSAPAADEAKRHAQNRRVDELAKLKHSLLKCRLPLPWNAAT ILEQLLRNHHRATLAAMAMECHWLPQSSSSSNMGARSCFAAVARGP</aaseq>

Gene Sequence

<dnaseqindica>1..183#1005..1243#1737..1833#1957..1998#2201..2327#3020..3132#3204..3267#3359..3452#3534..3642#3944..4000#4205..4267#4905..5169#5407..5618#atggagccgctgggcgggggcgggggcgggccggcgggcgcgccggagatcttcgcgggcggcacaggggcccgcggctccgtgcggcgcgccgtcgtcatcgggaacggctgcgcgggcgccgagaaccagtgcctcggcctcctccgcgccctcggcctcgccgaccgcctcacgctttacgtaaaccctgcctcccctgatcatttttcctgccaacttttggtgacagggtcataaaatcgttggtcactggagctgcggatttgattgtttgtgtttagtccgcaactgcattagtggatcctgtgttactgatgtcaggtggcagtttgcgtaggacttaatgattaactagtgattgtcctttatatttctgatgcaacattggatttgctttttacccagtaagtaaagtaagagatgtgcctctaggatttggggctgtttgttaattgttagtaccacttaccatgatctgtgcctaattaccatgggtcaagtctacaactctgcatttgatagtggcagagaatgggaaatcaatcctataatttctgttggcatgtattcgcctattcggtatgtattggtgttatctttatgaattgcttcaataattcaatatgctaaagtggttttgctttgccatgtgctgcagatgaggggcgtgtgcaatttaaactccaatctcaagtttactctgaaatggcttatcaacttttatgattgctagatgcagtaccagactaccaattaattgttgtcctgtaatttgttatttgcattcactgcatttgtggaggttgcagcaactagcaagtagtacattgttgtggtagaaaccatataaatccttttattcataacctgttcaaatggagggtagacattatttatttataaattcagataactatgccgctaacctctgttcgtaaggcagttttttagttcttacggaaccttagctttactttgtgaacttgtttctggtcttgcagcgtgctataaggccaacaggaggaatcaacaagtggctgcacttcctcccgatctccttgcataagttagtggaccaagtactcagacagatgttttctagtaacaaatttgcaacactatttcaaggggcaaaaatggctcaatatactgtctgtaatggccagtcccttggattatcttctgtcctagaagcagataccaaaaggatagttaccatggtcaatgatacctttgagaagtaagatcccatcgcttatattggtgctgtgctgtttgtgcactatttcatattaagcttgaagtccattccacaacttctgtgatgatgatctcttttatatagcttgcccatagtttagtcgccataatccctgttatatgcttggtagcttggcagctctggaataaaacagaactgaacattttcattctgagcacatgttgcccctgaaagattttaagaatatgttctgttgatatcattaccatggattgtagatgtggtatccttgaatgttgatgacataattctagtaagaacatgggaaataagtgtttttcttggatgtgaaataggcatcttcttagaacatagctctggacttctatccaatgaatattgctatgcaattgtagagcagcctaaacattgtctatgatttctaagttatcgaaatttcttgacatactatttaccctgcactgcttcctcaaattttgtgtttcttcagagaaggcctggcactagttgtcgcttgtggacgagataccatatcatatgcaagttcaataaggtgtttggctccagataatgtctttgtcatacaggtagaattctgtaaggaatgcatcacttacttgtttggttacttgttattcaacttgggttatgaatcattatccactttgtcatgtggatattagctttacatcgtatttgttgcatttcagatacaacatcccaggtatcgccttgataggtttgatttggtggtaactcctcgtcatgattactatgctttgactacaagaggacaacgggaattccctcaccttctctggagatggattactgcacgagaaccacctgggccaaatgtgatatgtgttttcttttctgcaagcaacaatctcttgtatgtgttcatagcgtagcaactgtctcaattctgaaccctgaaaattggaaagccaggtccttactgttggcgcacttcaccaagcagattctgctgcattacgcactgctgcttctgattggcatgatgaacttgctaactcaccaaagccattggttgtagtgaacattggaggaccaacaagtaaatccatccctctctccctcccttcctgtctgcttgcctgcagcctacctatgtgatatgagcttcctgatatatgcaattttacataagttagttcttactgttcattggacatgagaacaatggcagcgtcaaatggatctgcttgtgtctgttagttgtaacaaggaattttgatatctctttctctattgacttgtagcattgctaatgcaaaaggtgtcaaatacaaacatttacatgaacatgtcaagctaaaaaatgtttattttcttttagtttgtgttatggagctaaagcttccaaactaaaatggagaagctgcagttttctcacaaacctttcttctaatccctctttcaaaattttgaacgtagcatgagatattgctgttatatacatatttagcttgcatatattgattgaatgcttgggagcagaagaaagaaatcagtctcacaccttctgtgttctcatccatgcaaacccttgcatttcatatgcttttttgtttattcaagttttttttgtcttgttcagaattttcaacttgatgttcagaaaaaaaggttattccttcacatattttagttttttgagactttttttgaactttgaactcatatgctgagccttttctgctttcatggttatatagatttaacacatgtgatattttcaatggccaggaaactgtaattacgatgtaggccttgccaagaagttgataagctcactacacaatgttctgaagacctgtggaagtgtcagggtttcattttccagaagaacaccacataaggtaggaccttgaattgtccattttttcttagtaggtgccagtacttaaatttctaaatcatttgttggcaggtgtctgatcttatattgaaagagttcagtacacaccctaaggtttatatttggaatggtgaaggtagttgtcaaaagcctaaaatgagacatgtctgatgtactcatctttatgtgctctacgaaagttttctcagccagttttcttgatgcaggacccaacccacaccttgggcatcttgcatgggctgatgcttttgtcataacagcagactcaattagtatgctaagtgaggcatgtagcactgggtgagcttatattattcatctgtatcttttcactattttttttatttgtataaccgaccttcctaacatttctatttacaggaaacctgtttatgttgttggaactgagcactgcaggtggaaattctcggattttcacaacaggctgcatgaaagaggtgctgtccgccctttcactggactagaagatgtaagttcgctaaatattcacgtatagtggatcaattgaggttttatacagtcctggttatttcaattgccccctcccacacgtgcttcattttcccgagtaggcgatgttgagtcttttctgatgcaatcgtttctgttatccatctgtttcttttttcgccggaatgaccaaaggaggtcattcaatgtaattaagataattatccatctgtttcaccgtgatgaaagttttgaaaatactcaatatgaagatataattatcttagggacgaattatcacccttcttttttctccatagatgtcagacaactggagctaccctcccctgaacgatgccattgatgtggcggcacgggttcgtgaagtgcttgcagagcgtggatggacagtggggtaatggcaaccaacgtagaggaagaagaatgccatttcggtacagttttgcccaagaccatacagttttgtccagttgcatattgttttcgtggtaggacgtcagtacgtcaccgcttatttgcattatatctatgaaatacaacctttttgtgtcgtaccacaggaatttttgagcagccacagactgcaggaagaggttttaccctttcaaaaagaaaatcaacaggtgttttagtctgttttttttactggaacaggttgttttagtcttgacaagctcattggtgcacttagggtgtgttcgcatatgcttgttccaaatccggaacagtaacacgaaaaacagagcagttcattagcacacgattaattaaatatttattatttttttaaaaaatggattaatatgatttttaagcaacttgtatatagaattttttttaaaaaaatacaccgtttaatagtttaaaaagcgtgtgcatgaaaaacgagagagatgagttgggaaaaagggtgccgagcacacccttgttgttgtgttgaaaacagcgagttgaaatttgcatttttgcaaagcggagatcattggacggagtcgtctgacatcagacattgtgggctgtgactgtgttatcaccaactggcactgctattggtcttttttcttccataaagcctacggagacatgcatattcgctcaattttgtagcactgcacactgtggacgccacgttaggttgcagcatatgtgaattcttgctttatcaaaaagcttttacttccctcctggacggtaccccattttgaaatcacctctctcgctcgctccattgttttaacttttttgtgctgctggtccgagcgatgcgtaagcagttacagtagctgtgacggtgtgacctgtgaaagtgaaactgtgaaaaatctcaacagttgtgcaacaggacaagagcgagagaacgtgcaatcggacgacttttgtgttgggtggtcattccatgcgcagaccggctgcaggggcctcgtgcaatcgtgtgcagattcccttgggaaagggtgtccaggcggaagtgaccgttctgcccccgctgcggacgaagcaaagcgacatgcccagaatcgtcggggtatggctatttgtgaagccaacgcgggtactcccatccctcctaaaataaattaatttttgaaatttaaactttgttcttaaataaatgagtaaactgtactttgggccacctctttttaccaaagatgcaatttgggctagggacaagacatcattttcacattggactagataactttgcaaattatttcaatttggatcttcttttctatcttctctcctctttcttctcaagttgatgaactagccaaactcaagcatagccttctgaagtgccgcctaccgttgccttggaatgcagccactatcctcgagcagctcctgcgcaaccatcatcgtgcaactctcgctgctatggcaatggagtgccactggctgccacagtcctcgagcagttccaacatgggggccaggagctgcttcgctgccgtggcccgtggcccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0414000, RefSeq:Os04g0414000