Os04g0414800

From RiceWiki
Revision as of 11:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0414800| Description = Protein prenyltransferase domain containing protein| Version = NM_001059291.1 GI:115458311 GeneID:4335800| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0414800

Description

Protein prenyltransferase domain containing protein

Version

NM_001059291.1 GI:115458311 GeneID:4335800

Length

1638 bp

Definition

Oryza sativa Japonica Group Os04g0414800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20521730..20523367

Sequence Coding Region

20521730..20523367

Expression

GEO Profiles:Os04g0414800

Genome Context

<gbrowseImage1> name=NC_008397:20521730..20523367 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20521730..20523367 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccaccgccgtcctccggccatccccaccggtcgccaccctcctcggccgctgccgcaccgcgcgctgcctcgcccagctccacgcccgcatcgtccgcctcggcctccacaaccaccacgcgctcctcgcccgcttcgccgccgcctgcgacgccctctcctgcccctccgtcgccgcctccctcctctccgtcgccgtcccggtacgcctgcggaacgccgtgctcgcctccctcgcccgccacgccccgctgcgggacgcgctcgcgcagttcaacctcctccgcgggggcgcgtcccgcccggacgccttctccttccctcccctcctctgcgcctgcgcgcgcgcctcctccctccccaccggcgcttccttgcacgccgcggccatccgcctcggagtcgacgccgacctcttcgtccgcacggcgctcatccagttctatgggaggtgcggcgccgctgccgccgcccgggctctgttcgattcactgacaaaccccagcgaggtctcttggacggccattgtcactgcctatgtcaactctggtgatattttgactgccagggagttgttcgaccaaattccacaccgaaatgtggtgcattggaatgccatggttgatgggtatgtgaagtgcggtgacttggagggtgcaaggaagctgtttgatgaaatgcctgagagaactcctgcagcgtacacatcattgattggcgggtatttaaatgcagggaacatgggagctgcgagaacattgtttgataagctagaggaccgtgatttgttcgcatggtcaacaatgatatcagggtgtgcacagaacggttaccctggagaggctttgaggatttttaacgagttccaaaagcaagaaatatgtccagatgagcttgttattgttggtttgatgtcagcatgctcccaacttggtaacatcacattggcaagatggattgaaggttacatcatgatttatccaatagacatgaacaatgtccatgtgatggcgggtctcattaacatgaatgcaaagtgtggcaacatggagagagctactcttttgtttgaatctatgtcagttcgagatgttttttcatattgttcaatgatgcaaggtcattgcctccatggttcagctagcaaggctgtagagcttttttctcagatgctcttggagggcatcaccccagataacgccgcgttcacagttgttttgacagcttgcagtcatgctggcctagttgaagaagggaaaaggtactttgatatgatgaagaatgagtatatgattgtaccatctggtgaccactatgcttgccttgtcagtcttctcggacgttttgggatgctgagagatgcatatgagcttatcaagtcaatgcctggagaacctcatccaggagcatggggtgcattgctggggggatgcaagtttcattgtgacattgagcttggaaaaattgctgcaaagaagctctttgaaattgaaccggaaaatgctggaaattatgtctcgttgtcaaacatttatgctaacattgaccgatggggaaatgtttctgaaactagagctgagatgacaggaagagggataacgaaaattgcaggctgtaccttggttttgcagtag</cdnaseq>

Protein Sequence

<aaseq>MTTAVLRPSPPVATLLGRCRTARCLAQLHARIVRLGLHNHHALL ARFAAACDALSCPSVAASLLSVAVPVRLRNAVLASLARHAPLRDALAQFNLLRGGASR PDAFSFPPLLCACARASSLPTGASLHAAAIRLGVDADLFVRTALIQFYGRCGAAAAAR ALFDSLTNPSEVSWTAIVTAYVNSGDILTARELFDQIPHRNVVHWNAMVDGYVKCGDL EGARKLFDEMPERTPAAYTSLIGGYLNAGNMGAARTLFDKLEDRDLFAWSTMISGCAQ NGYPGEALRIFNEFQKQEICPDELVIVGLMSACSQLGNITLARWIEGYIMIYPIDMNN VHVMAGLINMNAKCGNMERATLLFESMSVRDVFSYCSMMQGHCLHGSASKAVELFSQM LLEGITPDNAAFTVVLTACSHAGLVEEGKRYFDMMKNEYMIVPSGDHYACLVSLLGRF GMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKIAAKKLFEIEPENAGNYVS LSNIYANIDRWGNVSETRAEMTGRGITKIAGCTLVLQ</aaseq>

Gene Sequence

<dnaseqindica>1..1638#atgaccaccgccgtcctccggccatccccaccggtcgccaccctcctcggccgctgccgcaccgcgcgctgcctcgcccagctccacgcccgcatcgtccgcctcggcctccacaaccaccacgcgctcctcgcccgcttcgccgccgcctgcgacgccctctcctgcccctccgtcgccgcctccctcctctccgtcgccgtcccggtacgcctgcggaacgccgtgctcgcctccctcgcccgccacgccccgctgcgggacgcgctcgcgcagttcaacctcctccgcgggggcgcgtcccgcccggacgccttctccttccctcccctcctctgcgcctgcgcgcgcgcctcctccctccccaccggcgcttccttgcacgccgcggccatccgcctcggagtcgacgccgacctcttcgtccgcacggcgctcatccagttctatgggaggtgcggcgccgctgccgccgcccgggctctgttcgattcactgacaaaccccagcgaggtctcttggacggccattgtcactgcctatgtcaactctggtgatattttgactgccagggagttgttcgaccaaattccacaccgaaatgtggtgcattggaatgccatggttgatgggtatgtgaagtgcggtgacttggagggtgcaaggaagctgtttgatgaaatgcctgagagaactcctgcagcgtacacatcattgattggcgggtatttaaatgcagggaacatgggagctgcgagaacattgtttgataagctagaggaccgtgatttgttcgcatggtcaacaatgatatcagggtgtgcacagaacggttaccctggagaggctttgaggatttttaacgagttccaaaagcaagaaatatgtccagatgagcttgttattgttggtttgatgtcagcatgctcccaacttggtaacatcacattggcaagatggattgaaggttacatcatgatttatccaatagacatgaacaatgtccatgtgatggcgggtctcattaacatgaatgcaaagtgtggcaacatggagagagctactcttttgtttgaatctatgtcagttcgagatgttttttcatattgttcaatgatgcaaggtcattgcctccatggttcagctagcaaggctgtagagcttttttctcagatgctcttggagggcatcaccccagataacgccgcgttcacagttgttttgacagcttgcagtcatgctggcctagttgaagaagggaaaaggtactttgatatgatgaagaatgagtatatgattgtaccatctggtgaccactatgcttgccttgtcagtcttctcggacgttttgggatgctgagagatgcatatgagcttatcaagtcaatgcctggagaacctcatccaggagcatggggtgcattgctggggggatgcaagtttcattgtgacattgagcttggaaaaattgctgcaaagaagctctttgaaattgaaccggaaaatgctggaaattatgtctcgttgtcaaacatttatgctaacattgaccgatggggaaatgtttctgaaactagagctgagatgacaggaagagggataacgaaaattgcaggctgtaccttggttttgcagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0414800, RefSeq:Os04g0414800