Os04g0416500

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0416500| Description = Conserved hypothetical protein| Version = NM_001059300.1 GI:115458329 GeneID:4335810| Length = 2573 bp| Definition ...")
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Gene Name

Os04g0416500

Description

Conserved hypothetical protein

Version

NM_001059300.1 GI:115458329 GeneID:4335810

Length

2573 bp

Definition

Oryza sativa Japonica Group Os04g0416500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20590964..20593536

Sequence Coding Region

20590966..20591435,20591879..20592122,20592206..20593318

Expression

GEO Profiles:Os04g0416500

Genome Context

<gbrowseImage1> name=NC_008397:20590964..20593536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20590964..20593536 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgccgtggacagggtcaggagaggggaggcgaagcagcacgacgcgctgcgtggcgcgcaggtggtcagcctccgcgtgtcgtcgttccgcgacatgccgagggaggaggcggagcggcggctcgccgagctccggtgcctcgtgaagagccgcggcgcgcgggtgctcctcgtcgtcgaggacctcaagtgggcggccgacttctgggccgccgcgcacgccggcgccaggagggtcggcagcggcggcggcggcggctactactgctctgtcgagcacgtcgtcaccgaggtgcgcgccctggcgtcgtgcgacggcggcatctggctcgtcgggttcgggacgtaccagacgtacatgaagtgcagggcggggcatccgtcgctggagagcatgtgggggctccagacgctcgccgtccccgccggcagcctcgcgctgagcctcacctgcgccttcgacgacagcgcgctgggcgcagtcaatcagtccatgaaagcgagccctcacaccaccgatgggaaccgcccggcgccgtcttgcgggccgcttttgggcggcagccacctcctctccagatgctgcggcggcgactgctccgccgcgacgacgacgcacgagcacgacaccaaggcgtcgttgccccgctccttcgtgtcgtcgtcgagcctcccttcttggctccagcattgccgcgaccagcagctgcaggagtcgacacatttcgcggatcttggcaagacatggggatccatctgcggcaagccgtctcagcggatgacgctgcatttctcggcgccggtgtcgccggcgtcctccatctcctcctacgagcacggccacggccaccagcagcagcagcaccagcctcaccactcgtggcttctcgccgacctcgacgccaagcacccatggaagcccaagcgcgaggacgacgacgacgagaaggccaagtcgcacgacgactgctccggcgcctccaatggctcggtggaggtggagtgccgttccaggttcaaggagctcaacgccgagaacctgaagctcctgtgcgccgcgctggagaaggaggtgccgtggcagaaggagatcgtcccggaggtggcgagcgccgtcctccagtgcaggtccgggatcgccaagcggcgggacaggtcgaggtcgacggaggcgaaggaggagacgtggctcttcttcctcggaggcgacgggcacggcaaggagagggtggcgagggagctcgccggcctcgtcttcgggtcacgcaagagcttcctctccgtcaagctcggcgcctcctcctcctcgccgtccgcgtcgggctccaccgaggatcaccaccggagcaagcggccgcggacgacgacgacgtcgtcggcgagcgaggcctacctcgagcggctctacgacgccgtctcggagaacccgcaccgcgtcatcctcatcgaggacgtcgagcagggcgaccatcgctggcaggtgggcgtcaaggaggccatcgacagaggggttctccggagccaggccggcgacgaggtcggcgtgggcgacgccatcatcatcctgagctgcgagagcttcgaggcgaggtctagagctggctcgccgctgatgaacaagaagatgaaggtggagaaagaggaagccaacacaagtgatcatgatcacaaattagaaatcgaatcaggcgccccctcttcttgcttcgatttgaaccttgacatggagagcgatcaagcagcagatgagctcagctccggtgatgtctgtctgctcacggcggtcgaccgggtgctgctcttcagaaggcaggatgaaatgtaa</cdnaseq>

Protein Sequence

<aaseq>AAVDRVRRGEAKQHDALRGAQVVSLRVSSFRDMPREEAERRLAE LRCLVKSRGARVLLVVEDLKWAADFWAAAHAGARRVGSGGGGGYYCSVEHVVTEVRAL ASCDGGIWLVGFGTYQTYMKCRAGHPSLESMWGLQTLAVPAGSLALSLTCAFDDSALG AVNQSMKASPHTTDGNRPAPSCGPLLGGSHLLSRCCGGDCSAATTTHEHDTKASLPRS FVSSSSLPSWLQHCRDQQLQESTHFADLGKTWGSICGKPSQRMTLHFSAPVSPASSIS SYEHGHGHQQQQHQPHHSWLLADLDAKHPWKPKREDDDDEKAKSHDDCSGASNGSVEV ECRSRFKELNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEA KEETWLFFLGGDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRS KRPRTTTTSSASEAYLERLYDAVSENPHRVILIEDVEQGDHRWQVGVKEAIDRGVLRS QAGDEVGVGDAIIILSCESFEARSRAGSPLMNKKMKVEKEEANTSDHDHKLEIESGAP SSCFDLNLDMESDQAADELSSGDVCLLTAVDRVLLFRRQDEM</aaseq>

Gene Sequence

<dnaseqindica>3..472#916..1159#1243..2355#gcgccgccgtggacagggtcaggagaggggaggcgaagcagcacgacgcgctgcgtggcgcgcaggtggtcagcctccgcgtgtcgtcgttccgcgacatgccgagggaggaggcggagcggcggctcgccgagctccggtgcctcgtgaagagccgcggcgcgcgggtgctcctcgtcgtcgaggacctcaagtgggcggccgacttctgggccgccgcgcacgccggcgccaggagggtcggcagcggcggcggcggcggctactactgctctgtcgagcacgtcgtcaccgaggtgcgcgccctggcgtcgtgcgacggcggcatctggctcgtcgggttcgggacgtaccagacgtacatgaagtgcagggcggggcatccgtcgctggagagcatgtgggggctccagacgctcgccgtccccgccggcagcctcgcgctgagcctcacctgcgccttcgacgacaggtaaaaaatcatccgatcgatctaaaaaaagtttgttaagttctcgcggcgcagcgtgtcacgtcaggtgaacgaatcatgcacccgcgccggccttgcagaaacgaaatgcctctggtctctgtgatctgaccccttcgttactgagcaatcagtaagcatcagtagttcagtaccatgcgggtgaaagcttttgcatcttttgcgtgctttctgggcaaaagctttaggtcaatctatagctcctcatcagcttcacattctctttttctaatatcgcattatttgaacattcacgagagcatgatatatcgacaatacaatttcagaggtacagcggctgacaaagatgatcagtttagctgatcttgtggagacatgtcgatcggtgaggtgacagtgtgtgcaggaatctaatttccgttttgttattctttctgcagcgcgctgggcgcagtcaatcagtccatgaaagcgagccctcacaccaccgatgggaaccgcccggcgccgtcttgcgggccgcttttgggcggcagccacctcctctccagatgctgcggcggcgactgctccgccgcgacgacgacgcacgagcacgacaccaaggcgtcgttgccccgctccttcgtgtcgtcgtcgagcctcccttcttggctccagcattgccgcgaccagcagctgcaggtgccactcgatcgaatgctaatctttttatcttaattaatcggtcaatcattgctgattttttttttgtcttctcgtgataggagtcgacacatttcgcggatcttggcaagacatggggatccatctgcggcaagccgtctcagcggatgacgctgcatttctcggcgccggtgtcgccggcgtcctccatctcctcctacgagcacggccacggccaccagcagcagcagcaccagcctcaccactcgtggcttctcgccgacctcgacgccaagcacccatggaagcccaagcgcgaggacgacgacgacgagaaggccaagtcgcacgacgactgctccggcgcctccaatggctcggtggaggtggagtgccgttccaggttcaaggagctcaacgccgagaacctgaagctcctgtgcgccgcgctggagaaggaggtgccgtggcagaaggagatcgtcccggaggtggcgagcgccgtcctccagtgcaggtccgggatcgccaagcggcgggacaggtcgaggtcgacggaggcgaaggaggagacgtggctcttcttcctcggaggcgacgggcacggcaaggagagggtggcgagggagctcgccggcctcgtcttcgggtcacgcaagagcttcctctccgtcaagctcggcgcctcctcctcctcgccgtccgcgtcgggctccaccgaggatcaccaccggagcaagcggccgcggacgacgacgacgtcgtcggcgagcgaggcctacctcgagcggctctacgacgccgtctcggagaacccgcaccgcgtcatcctcatcgaggacgtcgagcagggcgaccatcgctggcaggtgggcgtcaaggaggccatcgacagaggggttctccggagccaggccggcgacgaggtcggcgtgggcgacgccatcatcatcctgagctgcgagagcttcgaggcgaggtctagagctggctcgccgctgatgaacaagaagatgaaggtggagaaagaggaagccaacacaagtgatcatgatcacaaattagaaatcgaatcaggcgccccctcttcttgcttcgatttgaaccttgacatggagagcgatcaagcagcagatgagctcagctccggtgatgtctgtctgctcacggcggtcgaccgggtgctgctcttcagaaggcaggatgaaatgtaacactagtgtacatgaaggatccatgtttatcagctagggtagctagctcattgctcgtctaattagattttcctttcatttgttttgatggttttttttgtttctagtattaactttggctttagaggatcatggcattggtgcggttggacaatggcatattatgagcttcgttaagatggagctctgttatatatttgtggtggtggtgatcaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0416500, RefSeq:Os04g0416500