Os04g0418000

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0418000| Description = Conserved hypothetical protein| Version = NM_001059306.1 GI:115458341 GeneID:4335816| Length = 3402 bp| Definition ...")
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Gene Name

Os04g0418000

Description

Conserved hypothetical protein

Version

NM_001059306.1 GI:115458341 GeneID:4335816

Length

3402 bp

Definition

Oryza sativa Japonica Group Os04g0418000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20676024..20679425

Sequence Coding Region

20676087..20676234,20677071..20677375,20677496..20677681,20679012..20679068

Expression

GEO Profiles:Os04g0418000

Genome Context

<gbrowseImage1> name=NC_008397:20676024..20679425 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20676024..20679425 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccctccgctcctcctgcgccgccgcgcgccgtctgctccggatctccccggccgcgctgtccaccctcaccgccgcctcctcccgccccgccgcggtggcgcccctcgcgcgcccgatcgccgccgccgccgtctcaggtggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatctgccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctggactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacggatgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaagaatttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactggtgagaatgtgggccccttgcctggttatatagaagatgctgttaaatctgcatataagcgttacatgaaatatctggaatcatttggcccggaggaaaattatctacgtaagaaagtggagaatgagttggggactaaaatgatacacctgaaaatgcggtgcagtggtgtagggtccgagtggggaaagatcaccctgattggcacctcaggcatctcaggatcctatgtcgagctaagggcatga</cdnaseq>

Protein Sequence

<aaseq>MAAALRSSCAAARRLLRISPAALSTLTAASSRPAAVAPLARPIA AAAVSGGNNAFSWNLRRLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAK KAASKATDDKAGKEALLNVFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYI EDAVKSAYKRYMKYLESFGPEENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIG TSGISGSYVELRA</aaseq>

Gene Sequence

<dnaseqindica>64..211#1048..1352#1473..1658#2989..3045#gaaacctcgcccttcgtctccgcctccgtcgcctccatctcgccgcgatccctctccccggcgatggccgccgccctccgctcctcctgcgccgccgcgcgccgtctgctccggatctccccggccgcgctgtccaccctcaccgccgcctcctcccgccccgccgcggtggcgcccctcgcgcgcccgatcgccgccgccgccgtctcaggtcctcctcccatctgactcttcttgttcttgctgtttcgctaccttgtagtcgatgatgatgatacctccttcagttcgtgtttggggtggattgggctgacgatgcgtgtttagggttctgtgcgtgctgcttgcttgtgcaggctgattccagatttgtgtttgccgtgtggtagaatctgattgttttgggggatttcaactccgagagattggatttgagatgctatcgtgtgtggtgataataatttgccaggaagttattggttgtaaagatacaaggttcgggggtggcgggggtgccaattgttggtcgctgcgttgtagttaaagcatcaataggaaaaatgttaacactctgtgtataaaggtttacatttccaagctgatcctgaacttcacttcagatgtgttgtcctgaagtgttgttcctgctcgtgttgcatctttgatcacataataacaggcaatattgtttaaaatgatgttgctgcaaaccaagaataactggttcaaaacagtgagatttttcacttgattctgaagtaaataagcttattattctctaacctttttgtcaaagaatacgttgacgggaaaaaaaaccactgtttgtcctttatatgccataagtgtataagaatgggagaagcatggtaagaggatggttgacaaagagaaatatatttggaagagtcattgatgtcatcttgccttttgtggtcttcattttgctgcaatgtaacactgttgccttagttcaaaattgtacataccccaatatcaaattttctgtgctcaatgttgtttaacttatacttgttttaaattcaggtggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatctgccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctggactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacggatgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaagaatttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactggtgaggtcagtacctaatcacatatatccctcattgatgtattgctttctgccaatttgggggatcagtcatcagtgtctctttcttatgcttattacttgttgtaccactccttgctcttgcagaatgtgggccccttgcctggttatatagaagatgctgttaaatctgcatataagcgttacatgaaatatctggaatcatttggcccggaggaaaattatctacgtaagaaagtggagaatgagttggggactaaaatgatacacctgaaaatgcggtgcagtggtgtagggtccgagtggggaaaggtacactcttatgttacctatccctgttgtatattttacctttgtgacagcttctgtggtagatttgcatttgacaagtccatggattgtgggtcctgatgtatgctttagtgcggatttatgctatcatttttaatggtttcttatgattgtattcaagatgttgtgtagatgttattttcagcgtagaagcagagttagtatgtgcagtttctgctatcacaaatgtgttatttgtgtttaagaatatattcctttctatggctaaggatcatttaatatcagactgcatcttgggtcatcacttgtcattggagtaggttgtactatgtcaggacagtcctttattattattttgcttgatacaaagggagaaatgagattctacatccatctttttacttgacgattagaacattgtcacagcctccagggctcatgtttgatcatatcttttctaattgaatatgtatataaaaatcattaaaactaaaactacattaaagtgtttttcacgacaaatctactacagtcattttcacatcaaatcttaatgtttttgcaaatatccgtgatttaggattttgaggtttgaccacatacatcctaaaaaatcatgtatttgagaacggaaggagtagcttagagtgaatataaacacctcaacctcatccaaaaaaaccaagtgaatgaactaggaccatcatcttgtctatctattcatttggtttgaagaagggaaattgcacaggtaagttgagatttgagaacaattgcagcgcattctcattttaccaagtcttgtgctagatatacttcaaataaatgtaaatgtaaaatggaagctaaatcagtttatcctgcacagctatacactgtgtaaggctcggtaataaaaggtacatgcttgttattttgttgtttgcttgcacagagacctgtagtacttccaattgagcactggcatacacccctggtaccatgtaacatgttaactttcaagaagggggtatgcttatcttattttatctgtaattagtcaaaaaaaaaggagctgttcatttaccattgtcaccacttacttcaaaccttataagggcttataggggtgtttgcttccagccaatttggaacatatgatttagaccgagtttgaattgttttcaaattaaaatagacgagttcatgcttgacgttgtaacatgtgtggaataatattttcatgtcagtgtatagctgatatgctcgttcctccttgcttcgactggagttagaaggacaaatctatatccaacacctgaagctcatgatttatttatttcacttgcagatcaccctgattggcacctcaggcatctcaggatcctatgtcgagctaagggcatgaggaaagtctgcagatcataaccatggcagaacatcgttttctgagggaaggatgcatatcagaacaaggtgttccgtttctcttttcttcttactgtgtagctaccttgccaataacaaggagatcatcaaacagatgtgcacttaaagtaattcagtgtgctccagaccttcctgctgtaataagaacgtgtttctggggttcacgtcgatttgtttttgctccagtcatggtggtgcgtgaagcatgtagattcagttgattccttgcatgagccgtgaattgtttgttcaagctcctactctgtatggctctattgaactcagaagtagcttaatcggtgttcagattccttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0418000, RefSeq:Os04g0418000