Os04g0418800

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0418800| Description = Similar to Hydroxyproline-rich glycoprotein| Version = NM_001059308.1 GI:115458345 GeneID:4335818| Length = 1790 bp|...")
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Gene Name

Os04g0418800

Description

Similar to Hydroxyproline-rich glycoprotein

Version

NM_001059308.1 GI:115458345 GeneID:4335818

Length

1790 bp

Definition

Oryza sativa Japonica Group Os04g0418800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20730341..20732130

Sequence Coding Region

20730421..20731351,20731487..20731503

Expression

GEO Profiles:Os04g0418800

Genome Context

<gbrowseImage1> name=NC_008397:20730341..20732130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20730341..20732130 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggcaaggccgctctcctgatggccctggtggccatcagcgtcgtcctggaggccagggcggacgccggtggctacggcggcgggtacacgccgacgccgacgccggtgaaaccggcgccgaagccggagaagccgcccaaggagcacaagccgccgcaccaccacgagcccaagccggagaagccacccaaggagcacaagccaccggcctacacgccgcccaagccgacgcccaccccacccacgtacaccccgacacccaagcctacgccaccgccatacacgcccaagccgacgccgccggctcacacccctactcccccgacgtacacgccgacccccactccacccaagccgacgcctcccacctacaagccacagcccaagccgacgcctgcgccttacactcccactcccacaccgccaacatacaagccgcagcccaagccgaccccgccaccgacgtacaagccgcagccgaagccgactcccaccccctacactcccactccgacgccgccatcgtacaagccgcagccgaagccgactcccaccccctacactcccactccgacgccgccatcgtacaagccgcagccgaagccgactcccaccccgtacactcccactccgacgccgccatcctacaagccgcagcccaagccgaacccgccacccacgtacaagccgcagcccaagccaaacccgccacccacgtacaagccggcgccgccaacctacaagccgcagcctaagccgaacccgccacccacgtacaagccgcagcctaagccgactcccactccctacactccacccacgtacaagccacaaccgaagccgactcccactcccactccctacactcccacgcccaagccgaacccgccgccaacctacaagccacagcccaagccgactcccacgccgccgccctactag</cdnaseq>

Protein Sequence

<aaseq>MGGKAALLMALVAISVVLEARADAGGYGGGYTPTPTPVKPAPKP EKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTP PAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKP QPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSY KPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPT YKPQPKPTPTPTPYTPTPKPNPPPTYKPQPKPTPTPPPY</aaseq>

Gene Sequence

<dnaseqindica>81..1011#1147..1163#acacacactgacctgcaagctcgctgggcagcttacacaggggagtgaagtagagtgagtgtgagagagagtgagtgagaatgggtggcaaggccgctctcctgatggccctggtggccatcagcgtcgtcctggaggccagggcggacgccggtggctacggcggcgggtacacgccgacgccgacgccggtgaaaccggcgccgaagccggagaagccgcccaaggagcacaagccgccgcaccaccacgagcccaagccggagaagccacccaaggagcacaagccaccggcctacacgccgcccaagccgacgcccaccccacccacgtacaccccgacacccaagcctacgccaccgccatacacgcccaagccgacgccgccggctcacacccctactcccccgacgtacacgccgacccccactccacccaagccgacgcctcccacctacaagccacagcccaagccgacgcctgcgccttacactcccactcccacaccgccaacatacaagccgcagcccaagccgaccccgccaccgacgtacaagccgcagccgaagccgactcccaccccctacactcccactccgacgccgccatcgtacaagccgcagccgaagccgactcccaccccctacactcccactccgacgccgccatcgtacaagccgcagccgaagccgactcccaccccgtacactcccactccgacgccgccatcctacaagccgcagcccaagccgaacccgccacccacgtacaagccgcagcccaagccaaacccgccacccacgtacaagccggcgccgccaacctacaagccgcagcctaagccgaacccgccacccacgtacaagccgcagcctaagccgactcccactccctacactccacccacgtacaagccacaaccgaagccgactcccactcccactccctacactcccacgcccaagccgaacccgccgccaacctacaagccacagcccaagccgactcccacgccgacgccgtacaagccgcagcccaagccgactccttctccctacacccccaagccaactccgacgccgccgacctacacaccgacgccaacgccgccgtaccacaagccgccgccgtcctacacccccggcccgccgccgccctactagttgtgttccgccactctccgtcacgttccgaccaaaggtatagtacgcccaacacttcagacgctcacggttcagtttgcacatttacttattttcggaaagatttttgagtccgaacaaatttaaatataactaatatttttacaataaaaatttcagcatagattcacttatcaacataaaattttatattgcttattaattaacctgcatgcatggacgaacggatatcttgaataagtctcttaaaagcgggtgcttaatggcgtactctgtttgttttctgtctttgcaggaggtgaccgaccgaccagagttgtgcgagaggccaaagaggctcttccttccgtgaagattgctgtgcatgccgagctgcgctgcctttaattacctatagctaattaattagctagggccaatgttgcgaggagaataatgcatgcttgagtgccaatgttgctagctcgctccctctctagatgtgatgtgtatcatgtgttgtgtgttgctcgaatttgtactgtctagcgtacgtcgatcccgtggtgatttgtggagtatggtattgttgtgttacggtataaccaaaaataacagcggaaatggaagtaaaagctgttttcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0418800, RefSeq:Os04g0418800