Os04g0423700

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0423700| Description = Conserved hypothetical protein| Version = NM_001059333.2 GI:297602722 GeneID:4335845| Length = 2982 bp| Definition ...")
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Gene Name

Os04g0423700

Description

Conserved hypothetical protein

Version

NM_001059333.2 GI:297602722 GeneID:4335845

Length

2982 bp

Definition

Oryza sativa Japonica Group Os04g0423700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20972076..20975057

Sequence Coding Region

20972076..20972106,20972216..20972607,20972831..20973024,20973107..20973501,20973905..20973979
,20974693..20975057

Expression

GEO Profiles:Os04g0423700

Genome Context

<gbrowseImage1> name=NC_008397:20972076..20975057 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:20972076..20975057 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagggcggcgagggggaaggcgccgaggccgaggccgaggccgccgcgcgggctggcggcgagcctccggcggctcctcgccggggccggcggcgggctgggcgtcgcggcggcggcgtacgtcggggtggactacctgcggtacctctccccggcgtggcacgggcggctgatgccggcgctgtgggcggcgctggcgctcgccgccgcggcgcgggcgccgttctaccgccactggtccgccgagctccgcgccgcgctgccctttctcggctccatcgccttcatgctcggggccttcctctgcgaggccgtctccgtccgcttcgtctccgccgtgatggggctccagtggcacagttcaagtaaggaatcgatgcccttctggaataaagggccatctagaagttcactgggcaagaaagccaagcgtctatctgctgctccacttcctgacactgggcaatggctgcttctagcattgaacgagaagcttcctcaaagtgtggttgatctactgagagcccatgttatcactcttcaccattacttgatgttgtttatcatgctgggtttctcagtgctctttggctgcatcaaagctcctggtcttggaatagccacaagatatatgttcactatggcaattggtcgtttgcttcggacgatgacgtttgtggccacaattcttccatctgcaagaccatggtgtgctgcagctcggtatcaaatacccggccatcctcatccttgggcacaaaaatattatgttccatatgcttcagactcagatgctatccgtagggtcatacgagatgatgtggcctatgctgctgttcaatcttaccctggtgagtataggcctgactggggtcgaatgagcttcctagtagacattttgaggccaactcctggagagggaccttcatggtaccatctactgaagaaagctagtggtggttgcaatgatcttatgtacagtgggcacatgcttgttgctgttcttactgcaatggcgtggacggaagcatacgggggctggatctccgtcgcaatatggcttcttgtcctgcatagcgcgcaaagggagatacgagaacgccatcactacaccgtggattgtgtcgtggcgatctacgtcggcatactcctgtggaggatgacgaggttcatctggtctgccagagacgccagccgagctagaaggctcgccaaactcgatgaggttcataacaggctaatccatgcggcgaaggactcggacgtcgatgagatcagaggcctgctgaaagaggttgagctggccggccaagaaaagcagggcgtctctcagagggccatcctggccttcgccgcggctacgatcattttcaccctgacctgtgttgtccttgccttgacattaaccagcgacgggatgcatggttttaacagagatgtaacttga</cdnaseq>

Protein Sequence

<aaseq>MARAARGKAPRPRPRPPRGLAASLRRLLAGAGGGLGVAAAAYVG VDYLRYLSPAWHGRLMPALWAALALAAAARAPFYRHWSAELRAALPFLGSIAFMLGAF LCEAVSVRFVSAVMGLQWHSSSKESMPFWNKGPSRSSLGKKAKRLSAAPLPDTGQWLL LALNEKLPQSVVDLLRAHVITLHHYLMLFIMLGFSVLFGCIKAPGLGIATRYMFTMAI GRLLRTMTFVATILPSARPWCAAARYQIPGHPHPWAQKYYVPYASDSDAIRRVIRDDV AYAAVQSYPGEYRPDWGRMSFLVDILRPTPGEGPSWYHLLKKASGGCNDLMYSGHMLV AVLTAMAWTEAYGGWISVAIWLLVLHSAQREIRERHHYTVDCVVAIYVGILLWRMTRF IWSARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAIL AFAAATIIFTLTCVVLALTLTSDGMHGFNRDVT</aaseq>

Gene Sequence

<dnaseqindica>2952..2982#2451..2842#2034..2227#1557..1951#1079..1153#1..365#atggcgagggcggcgagggggaaggcgccgaggccgaggccgaggccgccgcgcgggctggcggcgagcctccggcggctcctcgccggggccggcggcgggctgggcgtcgcggcggcggcgtacgtcggggtggactacctgcggtacctctccccggcgtggcacgggcggctgatgccggcgctgtgggcggcgctggcgctcgccgccgcggcgcgggcgccgttctaccgccactggtccgccgagctccgcgccgcgctgccctttctcggctccatcgccttcatgctcggggccttcctctgcgaggccgtctccgtccgcttcgtctccgccgtgatggggctccagtggcacaggtcagtgcacttctccggagctatggagctgacggattattcggtgcccggggtcaaagatgccatggatcttgggggagatttattaagctctttaatagctatttattgcatattttttaatttggatcttgggggaagatttaagctctttgattgtggaaggattttatggtgtgatctagcagagatttgctggtaggagtgcacatttttattagcagattttattgcttattaattcgggtgaaatttgagcataggagagttttataaatttccatatattacactttgtggaattttaaatagttaattttaggtatgaggaatgaagaaagtataaatcagttcaaagcagaaagctgtttgcttagagagaaacgtctgtgtaattggttaaaaacttccagtttgtcgtgcagggtgatttttgttaccgattcttgtttctggagtagacagattagttccggtgagatgatattgtgagattgtgacacaaatgctccattttggttaacctagtcgtgatctcaaggggttcagcttctccataatccaatggcttgtttgttgtgtcctcgctattcttttgtggtttttaacatattgccttttcaactttggaataaagatcaagtttatagtgtttggtaggtgcagtcgaatgaaaaagctttaaatggtaattgccgtttgtaagattacagttcaagtaaggaatcgatgcccttctggaataaagggccatctagaagttcactgggcaagaaagccaagcgtctgtacgtactttggacatgtactcctgatctatttgtgattcctctctcgacttgattgagaagacaaatctaacatttgactgcatctagtcctatggtctcctgaatgcaaattgacaacaagttcataattcctgtgaatttcagctagctataagactacaatattttgtgaagacaaactttatatatttataaactggattatggcccattcagagttaattttcactttcaagaacaatagtgcctttccatataacattaccacttaccatatgtacctttcttcaagtaatttattgccatctgctcacatccatgctcagacaaattctcatgtggaagcatcgaaatcctcacaattacttgtaaactgaagtctgttctactgttttaacagatctgctgctccacttcctgacactgggcaatggctgcttctagcattgaacgagaagcttcctcaaagtgtggttgatctactgagagcccatgttatcactcttcaccattacttgatgttgtttatcatgctgggtttctcagtgctctttggctgcatcaaagctcctggtcttggaatagccacaagatatatgttcactatggcaattggtcgtttgcttcggacgatgacgtttgtggccacaattcttccatctgcaagaccatggtgtgctgcagctcggtatcaaatacccggccatcctcatccttgggcacaaaaatattatgttccatatgcttcagactcagatgctatccgtagggtcatacgagatgatgtggcctatggttagtacatttggctatcacctaattaatattttagtgttgtgaaattgagaaaactaaattatcgtcctcccttttacagctgctgttcaatcttaccctggtgagtataggcctgactggggtcgaatgagcttcctagtagacattttgaggccaactcctggagagggaccttcatggtaccatctactgaagaaagctagtggtggttgcaatgatcttatgtacagtgggcacatgcttgttgctgttcttactgcaatggcgtggacggtatgtcatactttcaccttttccctgttacaacatcaaaatctctatatgtgctgttttgttggaagctggaaatgagttacttgtacttattagaaccacccttcatcaatacaactatgcccttttcttttgcaacagcgctgtgttagagaatagagatacttacaattgatgtcatctgaagttgtgaactccttttgaatctgtctcacgctcttaggaagcatacgggggctggatctccgtcgcaatatggcttcttgtcctgcatagcgcgcaaagggagatacgagaacgccatcactacaccgtggattgtgtcgtggcgatctacgtcggcatactcctgtggaggatgacgaggttcatctggtctgccagagacgccagccgagctagaaggctcgccaaactcgatgaggttcataacaggctaatccatgcggcgaaggactcggacgtcgatgagatcagaggcctgctgaaagaggttgagctggccggccaagaaaagcagggcgtctctcagagggccatcctggccttcgccgcggctacgatcattttcaccctgacctgtgttgtccttgccttgacattaaccagcgacgggtgatttcagctactagctttcttggaatcctctgaatgtcaaccccctttttccagggttatagtgttgtttctctagattcagatccttgagtgttgcttgttgtaggatgcatggttttaacagagatgtaacttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0423700, RefSeq:Os04g0423700