Os04g0428900

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0428900| Description = Similar to CSN8| Version = NM_001059340.1 GI:115458409 GeneID:4335854| Length = 3329 bp| Definition = Oryza sativa ...")
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Gene Name

Os04g0428900

Description

Similar to CSN8

Version

NM_001059340.1 GI:115458409 GeneID:4335854

Length

3329 bp

Definition

Oryza sativa Japonica Group Os04g0428900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21249638..21252966

Sequence Coding Region

21249929..21250068,21251329..21251436,21252343..21252524,21252636..21252712,21252804..21252887

Expression

GEO Profiles:Os04g0428900

Genome Context

<gbrowseImage1> name=NC_008397:21249638..21252966 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21249638..21252966 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctcgccgccgtccacgccgccctcgccggcaagtcctactcctccgtcgccccgctctgcgacgacctcttcctccaggccgcgtcccggggcgccgccaccgacggctggccctacgccgtgcacctcctcgcccacctctacctcaacgacctgaacagcgcgaggtttctgtggaagtcgacgccgcaggaggcgaaggacgcgcggccggagctcgccgccgtctggaggatcgggcagtgcctctggaaccgcgattacgcgggcgtctacgcggccgcgcaggggttcgagtggagccctgaaatcgccgacttcgtggccgccttcctagaaagctacagaaagaggattttccagttgttgacttctgcatattccacaatcagcgttgctgatgtggctcacttcatggggatgaatgaggaggatgctactaactatgccatgcaaaacggttggagcttggatgcggcagccaggatgcttactgtcgtaaaaccaaaggttaagactaaccagaagctcgatgcaagcaaacttcagcgattaactgaatgcgtcttccacctggagcactaa</cdnaseq>

Protein Sequence

<aaseq>MDLAAVHAALAGKSYSSVAPLCDDLFLQAASRGAATDGWPYAVH LLAHLYLNDLNSARFLWKSTPQEAKDARPELAAVWRIGQCLWNRDYAGVYAAAQGFEW SPEIADFVAAFLESYRKRIFQLLTSAYSTISVADVAHFMGMNEEDATNYAMQNGWSLD AAARMLTVVKPKVKTNQKLDASKLQRLTECVFHLEH</aaseq>

Gene Sequence

<dnaseqindica>2899..3038#1531..1638#443..624#255..331#80..163#gaactccaaaaacccttcccctcttctcccctcgcctcggcccgccggcggccggccaccaccgccacctcctcctccgatggatctcgccgccgtccacgccgccctcgccggcaagtcctactcctccgtcgccccgctctgcgacgacctcttcctccaggtaccaatccctcccctccccacccctctcccgcctcccgcgacgcgaggagggttagcgtagcgctcctgactcggtgttcctcgcgcaggccgcgtcccggggcgccgccaccgacggctggccctacgccgtgcacctcctcgcccacctctacctcaacgacctgtaacgccccgcgatctgctcccccacctctctcccatggaatttttctgggctagggcttccgggattaatgttgtttttgtgtttctgggtgggtgcgtgtgtgagcaggaacagcgcgaggtttctgtggaagtcgacgccgcaggaggcgaaggacgcgcggccggagctcgccgccgtctggaggatcgggcagtgcctctggaaccgcgattacgcgggcgtctacgcggccgcgcaggggttcgagtggagccctgaaatcgccgacttcgtggccgccttcctaggtactggttgttgctttactgttcatgatggaaacgtgcaacagttgaattattctgtgtctttgtgcaaagttgtattgcttactagaatgaattgcatactgtggtagtattgtgttggaggtcaccactttgtggtgtgggttgggaagtcgggagattcagatgtgcatacatatacttcatggagtaattgtggaaacgatttatctgcacaatcaggctgaatcagcttccttaatgaatacgcaaagttactattagtagagtgcccgttagtagagttttgtgctgcgtagtgtaatggttaaagtgtttatcttggaaatacttgcttcctaagatagccttgttcagtgggtttatactatctccttaataaggactagtgatttgattattttcaggctgctcataagagtttggttcccaagaagttcagttttgttcctatttttacttctaattgacaacatgatgcaacaattctagatgcacagaggatgttcattaactcatgcttcaatcaaaataaacactttgtagttatcatttatgagtgaaactgttgaatgtattaatgtaatagcattataattaaacatttgcacttttttataaggtgattgttaacattttaccagcagtcattgtgacacagtagtggaactagagaagttaagttctttccatgaagtgcttactatgacatataccataataatacgtcaatcaggataataagttaataacatcatgattgtttcccttttgcttgtttaaccaactaatcttctagtattatttttatattaggaaataagtataaagcctgctgttttatattttttttagtatttataattggttaacttgaatatccaatattgttttctgattacacagaaagctacagaaagaggattttccagttgttgacttctgcatattccacaatcagcgttgctgatgtggctcacttcatggggatgaatgaggaggatgctactaactgtacattttctgaaactatcttgttgctgtactatgttttttaatgttaagtacaatgttctgactatcttcatgttaatcaacagtatagatcatagaagttctgacatggttaatatggtgtttttagtcatctttatctgtagaaatcatccaaagtcccaattttaggatacactgcatccttttcaacttccatagcatttcttcatagattataatctttcgtccaatatgtgtttttgcaagttccttgaattttggaaggtaaatgtttctccctatgtctcaaaatataacaacttttaaccctcaggatttgtcccaaaatataacaacttctccaccaacattctctttccaaccaatcacaaccctccaccattcacttttcccacctacctccactactcatccaattacaaccctccaccattcacttctatctactttcttaataaccgtgtccaactctaaaactctaaaacaatgatggtgcccctatggacttcttttgggtagcacttctattgtactgactggattataacactgcatattacattactttcctttcacaatagaaaatagaaacctctccttcatacaatacttgaattccattttgtgccatcagtgttgtccacatttctcctggattgagcattgtacattctaggtttgaataaagtgtcagatattttgttgtctttgagactcggttgtgtcaaaattaaacatacttttgtgtgcatgaattttagtttgttttgatcattgtgataatgctggcccattgattttgatgttcacaatgaggtatatccacaatttcacatctaattggctatctctgttggcttgagtactgttgtggagtataaaattagtagaaattttggcacaacccactcaaaaagagttgtcttcattttaccatttcaatatagtgaatgcattcttcttccttctaattaccaaaatttttcgtaggtcattcatgtaacatattgaaaattattttttttttgtggtcaatgcatcaaggctcgtgtatccctctttctatggctataactaaaacttgctatatttgaaacatattgaaaaacatattgaatatttttggaataagcatccctctgtatttgaagcatttttagttctgcaaattttattatgctattgtgtttgactttctgcatgatatttgcctgcttcagaagctgatgacaatagttgtcttaataatcattacagatgccatgcaaaacggttggagcttggatgcggcagccaggatgcttactgtcgtaaaaccaaaggttaagactaaccagaagctcgatgcaagcaaacttcagcgattaactgaatgcgtcttccacctggagcactaaagtccagcattacgggcatcccgcatgactcttaagaaacctatttatcatatgatgccaagccgagattgccttttctccggaaatcagagttagttcagtgttgaatttccatctgcaattgatttctggttagcgaccttagcctttctctgtaatggttgcttgttgatatggttggtggtggttcttgccagacttacactgaagtaaatgacactgcttagtgtcaactcgtaagttaacgttgttttttgaagtatgagttgaaaattgtttcccgttttacag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0428900, RefSeq:Os04g0428900