Os04g0430100

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Revision as of 11:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0430100| Description = Similar to 40S ribosomal protein S10-1| Version = NM_001059351.1 GI:115458431 GeneID:4335865| Length = 2563 bp| Def...")
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Gene Name

Os04g0430100

Description

Similar to 40S ribosomal protein S10-1

Version

NM_001059351.1 GI:115458431 GeneID:4335865

Length

2563 bp

Definition

Oryza sativa Japonica Group Os04g0430100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21351857..21354419

Sequence Coding Region

21351949..21351951,21352069..21352117,21352565..21352847,21353447..21353582,21354084..21354164

Expression

GEO Profiles:Os04g0430100

Genome Context

<gbrowseImage1> name=NC_008397:21351857..21354419 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21351857..21354419 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctggccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgagttccagccatcctttaggagctctggtggcagacctggctttggccgtggtggtggcggaggctttggcgctggcccgacctcttcctcgatggagtga</cdnaseq>

Protein Sequence

<aaseq>MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIK LMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPF GSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSG GRPGFGRGGGGGFGAGPTSSSME</aaseq>

Gene Sequence

<dnaseqindica>93..95#213..261#709..991#1591..1726#2228..2308#gatttctccctcgcgccgccgcctcctcctcaccctccccgccccaggcgcaccctacgcttggagctcgtccgatccgctcggcgcccgccatggtaaacgcgcgaagctctgaatccatcctctgttcctcgcggtctcgcgtgcgtgccgtgctgcttgctggttgatgctaatctcctcactcgcgtttcgcctgtttgttgttgcagatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaaggtcagtggttcttggtccctatttgcacctcgtaatcgtactagaggcgtagagccgccgccatgtttagtggagattgttgttttaggtttgcaaaacgaggagattcgtgttgctccgtacaggagcacggttcttagtgcaggaactgccctcttgttaaaaggagaagcttggtttagatgtaggatttgatatgctagtgataatttttcattctaggaacccaatgaactattggttatatactagcgaaatctgtgcacccatgaacatcaacttaaattgattgtttcggtcctggtgttgtgaaaatctgtgtgtaaaaatttcaagaaaaatgatatcgctgttggtgtatgtcagtacagcgttcgcatgccaagaggctcaaactgaaagtgattgtaggtgctggttttaacttggtgtatgctgttgttgcagagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctggccgcccatttggttctggcccacctggcgaccgcccaaggtatacatattctcgtgatgctcccttcaagtgcatgcaatttggcatatactataatgtgcttagtgaacatggggcctgtgtcaccatttcaccatgatcatataacacttatatttctacaaatgattcaaatgggaaggagaaaattatggctataaatgtctgatattattcctgtattagatttatcgttaagaatctagcttgtagcttttgagatgggagtagtgagattctgtgggcagagcagtggagctttttagcatgtcagcacgtttgttgcataaaattgtccttcaagaaatatgttgctctcattttggtagaggtgttgatcgttttcatctgaccacagggcttctgctttagggtgaagcttgtaattttctgtgcattgttcataatgttcttgctttaggctgcagcttttgcttgtacagtgctttctaagcttgtgtataaataagataggattagaatgataaatgtattcaagatgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtaggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgagttccagccatcctttagggtaatcaactactttccctacaagtgtttcattattgttctgttgtgtcatgtagcttatttgacttgttacgctgaatacaagacaagcaaaatccatttttgtactgcctatgatgaatttatatttggatttaccatcaacttaaaagttctagcagaattaacttgtcttttttactcgtagttgtatgctacatccgagatgcctatatatttgatgttgttcgttcatgtcttcttggcctgaaaaaacgaactattgcagttccacataatgtttgggtgggatttagcgaggttcatatttttcttttgtgtagaagttttgaacaaccttgtgattttgcttgtcgaaggccctgtgcactatgcataccctgtttgttttaaacaagattttgtatttcctgttctgatatttagctaatatattgatagttcagttgatttgatgacatcaatgattttggcttatatttaccaccataaaattttgcagagctctggtggcagacctggctttggccgtggtggtggcggaggctttggcgctggcccgacctcttcctcgatggagtgaacttcccgtagtttggatatgatgttttccttcgcatgaggcgtttaattttgaaggacagttaaattatgtagcagtgatgtttgcaggatcgaccgctgttgacatatgctaaaaatatgctatcttgataccttccagtataatagtttttgcgaacgcttaagttcaatgttaatgcttttgacatattggcggaaattatcttttgcttctgaaaaaaagaattatgtgcatgtttgattgctggctgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0430100, RefSeq:Os04g0430100