Os04g0431200

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0431200| Description = Cyclin-like F-box domain containing protein| Version = NM_001059358.1 GI:115458445 GeneID:4335872| Length = 4655 bp|...")
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Gene Name

Os04g0431200

Description

Cyclin-like F-box domain containing protein

Version

NM_001059358.1 GI:115458445 GeneID:4335872

Length

4655 bp

Definition

Oryza sativa Japonica Group Os04g0431200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21403209..21407863

Sequence Coding Region

21403334..21403346,21403930..21404016,21404130..21404236,21404529..21404645,21404722..21404824
,21406395..21406468,21406662..21406715,21406803..21406907,21407003..21407061
,21407150..21407360,21407517..21407576

Expression

GEO Profiles:Os04g0431200

Genome Context

<gbrowseImage1> name=NC_008397:21403209..21407863 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21403209..21407863 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcagatgtctccgttgatgttcggccagagtttaactcttttgatcatttgagaagcatacgatatattgcaacagatagaccatggctgacgttatatggaataagagttcaacctgtaacaccattcagcagtttgagcagtagacctgatctggcactcattcatcaatgcctacctgatgagctgctttttgagatctttgcaaggatgagtccatattctttagggagggctgcttgtgtgtgtcgcaagtggaaatatactgtacgcaatccgactttgtggcggaatgcttgcctcaaaacttggcagaggactggaatggaggctaactaccagatggtgcagtcgctatatgattcttcttggaggaaaatgtggatgctgagaccaagaatccaatttgacggtataagtctttatgttagtaggaacacatatatccatacggggactgcggagtggcagttcacaaaaactgtcaatgtggtttgctactatcgttacttgagattttttccaagtggaaaattcctctacaagatttccccacagaagattaaggatgttgtcaagtgcatgcatttccgggcatccaaaggtgattgtgtatttaaaggcgactacgtattgtcagaggatggccagatagaactggcactcctgtatccagggcgtcgctacacactagttaggatgcgcctcaggcttagaggcacaactctgggcgcaaacaacaggttggatgtattgaagatcttaaccaccggggtgaatgcaaccgaactgagaaactggaaaggcagcgtgcttgaacttgtggagacctgggatgaggatgagacgcatgatccagaagttcctgctgttacccacagcaggggtttgaccccatttgtgtttgttccatttgaggaggctgatacttcagtgatgaatctgccagtggagaagatggactactttgtccctgggtga</cdnaseq>

Protein Sequence

<aaseq>MASSDVSVDVRPEFNSFDHLRSIRYIATDRPWLTLYGIRVQPVT PFSSLSSRPDLALIHQCLPDELLFEIFARMSPYSLGRAACVCRKWKYTVRNPTLWRNA CLKTWQRTGMEANYQMVQSLYDSSWRKMWMLRPRIQFDGISLYVSRNTYIHTGTAEWQ FTKTVNVVCYYRYLRFFPSGKFLYKISPQKIKDVVKCMHFRASKGDCVFKGDYVLSED GQIELALLYPGRRYTLVRMRLRLRGTTLGANNRLDVLKILTTGVNATELRNWKGSVLE LVETWDEDETHDPEVPAVTHSRGLTPFVFVPFEEADTSVMNLPVEKMDYFVPG</aaseq>

Gene Sequence

<dnaseqindica>126..138#722..808#922..1028#1321..1437#1514..1616#3187..3260#3454..3507#3595..3699#3795..3853#3942..4152#4309..4368#aggcgcttctcccccccgaagctcgcgcgcacgcacgcacgctgggcgcttcttcttcccccgcgcatcgtccgaaatcctccggattttctgaggaatccccccgaatttccttgcgtcccatcatggcctcctcaggtaattcctccgtgccaattcgtggtattcatcaaaggggggggggggatttctttctcttttttttttcaagcaatggatggtgaatcgagggctaggcgaaattactaattaccctcgccattttcgtgcgtatcctgcccttagcccaccgccaccgcctccggcgatccccatccatcccgcgatccgatacccgcgcactttttttttctcgaatttgcgttaaccctagcttcagttctagaaatttgtttgccttttaaccttgatactaataacaatttgatggttcccaaaaagttcccatgttagaaccgccactgtctattgcaccgtaaaagtatgcagcaaccgaggcgcttgatataatctattgagcatctaatgaagcagggctagatagaaaaaaaaagagaagttcagattgtcacagctgcaactgcaattgcttctagagttttgcatgagaaaatattatcgcagtcttaggacttcttatttctgttgtgaaatcctgggtatgttatcagttctcactttaacactcgcttgtatggtatgattatgcatttttatgcagatgtctccgttgatgttcggccagagtttaactcttttgatcatttgagaagcatacgatatattgcaacagatagaccatggctgagtaagtacagcctgaagctagccttttcttattttgattgatatggccttggtcattagcacaattgaggattaatgaactatcttccttttggtgtctggtttcgctaacagcgttatatggaataagagttcaacctgtaacaccattcagcagtttgagcagtagacctgatctggcactcattcatcaatgcctacctgatgagctgctttttgaggtaatatgtggaccgatgggcatttgtcttcatatttgtatcatataaaatgtattatggtaaaatggaattcctcatctctgtagtataatttgcttccttctaattgataaaatatcactatgtaatatcctcaattgacatataatctttttctgctcaagtatataagtagctttgtggctctattctgtagtacctccttgtatcaaattatcattacatcagcatgaaagaagtgggaatacttagctcagtaacaaattacatgtctctttgctgaactacacagatctttgcaaggatgagtccatattctttagggagggctgcttgtgtgtgtcgcaagtggaaatatactgtacgcaatccgactttgtggcggaatgcttgcctcaaaacttggcaggttagtttacacatatctattttggttggtttcgtatgcgatgttttgctcaaatatttgaattttacatgtgaagaggactggaatggaggctaactaccagatggtgcagtcgctatatgattcttcttggaggaaaatgtggatgctgagaccaagaatccaatttgacggtataagttcaagaagaattttatcataacatatgttcaaacattaatttgatgaatgttaaattcatatgcgccaactaggctaatatcatagcacacatcacattctttagatttgtgtggaaagaaattgtctagattttaatcaaactgataaaatgtctcatcatgagctgtttttctctcacttggctgtttaaaattttaatcaggtatgtactgtacaatactggtaccttggtcaaatattgtacaaaagtatgtaagcaaagtaatgtgtcattcattctcaaattttcatgtgtcactagcctagagctcgtgcattgcaacagaaaacaaattgagtttctagcttattaagtcaattaataagcacttatttagtctaagtaatactatgaattttcttttaaacaaataggtgattttgaaatttgggggagccaatagtgaaataggggatgacttgttgaaaggtggtgtaataatatagattgtgcggcccagatgttagtggtaggggtggtgtgggaatggacaccaccactactaacattttaagtagtatagataccggcatacatgtaaaacaacaaaatactactactgtacacatgcatcatactcttgtgaattggctgtgcaaagacggtggtgggaggaggtgcatagcagcgtggaggcggacaaatcacagcatgtgctcaggcttgagcattgtgcactgagcccaggaagaatcacaggttcagagcagaagagctgcattgacatgttgatacactgtgcaccagtaaaaaaaatctaggccagaggaattttttaaaatcattgctgtctcgcatagcttcatgaggtgtagctttttcataacaccaagatctggttccgatctgtctcatctaactgtttgtgccaccatgtttacttgtggccagaggctgctcaactcacttgtcaattccaaaaatgcatgaacaacaagaaaacattttgttgcacagatcttggagcacaaccaatggctgatcggagttcgtatgtacctattttgctgcctaaaaaattccaattattactggtccaaatgaaatggacatcaattattatggtgacaagtgaatgatcagttgattgtttttgggaatgtgtatgccagtttatctgttcaatacactgaatttcacgcataattctatgtttattatcactatggtacacattgatttcgtgcattcactttgggttgcatgctgagacaccatgacatttttaaagtacagtaagaatagtatgacccgcagtgaatgcgcttttgactcattaatgaatgtatgtcgaggcatatcaggctgttacattttgactgaatttcagctgcagactaatcctgttgcatactgcgataatagtgtatttggatcagtagtttgctactgaagactagctgaaaggcattgcattagttttggaacttttctgttgttattgctgtaattgctagagtaccctgtattgtggctatactttctttggttctttgagcgaaatttgatacttgttgcttcttcaggtctttatgttagtaggaacacatatatccatacggggactgcggagtggcagttcacaaaaactgtcaatgtggtatgatattatggtggtattattgttcatttgattatacttacctgtacaaataccggtctttaggatttggttactgcatatttctattgttggtgtctgaatagctttagtgtttagtattaatttatgcgcttattgtttccaagttaatctgttaatggcatggtaatgatttttgtttgccccccaggtttgctactatcgttacttgagattttttccaagtggaaaattcctctacaaggttcatatttgaattccttttgttttctacagtatatttctcgttagtgtaacatcggttgatattttaatttcctgtgaagagcagatttccccacagaagattaaggatgttgtcaagtgcatgcatttccgggcatccaaaggtgattgtgtatttaaaggcgactacgtattgtcagaggatggccaggtgaaacttatcgtacttgtttattcgtccttgggcaggatacatcaaattactgccaacattaatcattaattagttttttttctggcacacagatagaactggcactcctgtatccagggcgtcgctacacactagttaggatgcgcctcaggtattttggcttgaacttctgtctatgttttgaactcttgatgatttctcagtgcttctaatttgaaatttgtgcggacattttgtaggcttagaggcacaactctgggcgcaaacaacaggttggatgtattgaagatcttaaccaccggggtgaatgcaaccgaactgagaaactggaaaggcagcgtgcttgaacttgtggagacctgggatgaggatgagacgcatgatccagaagttcctgctgttacccacagcaggggtttgaccccatttgtgtttgttccatttgaggaggtatgacctatgatctatactactgttaggtgtaatgctatgttttcatttgcgccccgcgcttttcttttgttttctatattggaaaattatttcatacctagatagcctagtagaaagaactgactaattaatggctttgactaaaatgttcaggctgatacttcagtgatgaatctgccagtggagaagatggactactttgtccctgggtgatcttgcgcacaaataatagtttttccaagatatatgatgaagacgcaatttcgctgatgttagggcaataatgtgcatacaccatcagacgtcagtctttgttcaatttcatgctcatgttgcttgtatactgttgtatgaataatgctatgttttgttggtgcttgaaagcaaacattttgttggaccatcctcccgcagcaataatggtccaatacttactagtacatggtgttgccttgtaaatagatcatggtgcaactgatgaaacaatacatttgtggttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0431200, RefSeq:Os04g0431200