Os04g0431700

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0431700| Description = Ferritin/ribonucleotide reductase-like family protein| Version = NM_001187017.1 GI:297723164 GeneID:9268705| Length ...")
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Gene Name

Os04g0431700

Description

Ferritin/ribonucleotide reductase-like family protein

Version

NM_001187017.1 GI:297723164 GeneID:9268705

Length

4951 bp

Definition

Oryza sativa Japonica Group Os04g0431700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21419103..21424053

Sequence Coding Region

21419581..21419592,21420471..21423410

Expression

GEO Profiles:Os04g0431700

Genome Context

<gbrowseImage1> name=NC_008397:21419103..21424053 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21419103..21424053 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattaaagctaatgtaaattgggatacttttgattgggctgtgcaagggatacttgaacattttgttaaaaatcagagggacacaagagttatatattttgatggctggcgtggttttggagcatcagcagtccttagagctgtagcagatgagcttacatctcgaggagcttggccagaactacacattgataaagtaatccagattgactgctctacatggaaaagtagaagggcaatgcagagggcaattgcagtggaactcaagcttgatgattcggtaattgaaattattgataagacagatgaggaggatgattttaagggagtggatgaaggctctagaagcgagataatgagtgttgcagaagtgattgatcaagtcctcagggatcacaaatttatggttgcttttcataatggaagtggtgattacattgatttaggtagctttgggttcccgcaaattacactatttcgttccaatctaatattatggacctttcggaagaggttccaaggaagggagcgttactctgagataaaagacaaagtgaagaacacccatttattcgcatttgaaacagagtattatataacaagaaacaacattctcttcccagtactgcaaaaagaggctgctgccatagctgcccattatccttgcatgcgggagatcgacccggaaaggatcgtgcattgctgtctatatggactatttctctatctttgtttgcccaaacatttggagaatgagtgggcagcccgagcatcagtgtactggatgtgtgatggcatcatacaaggtgatcaggcatgggagataagcgctgcactttcaaaagaaataaagtgggatctacaaccttctttacaagatgaggtgcgtcaagaattcatagaatcatcctcaaaaaactctgtaagtatccagagattcaaaaacagatactttgatgggcaaaagttttacccttggatcacaatcactgcatcaaataatattaatccagaaacactacaggacatccgatccaaaaatgcagaggcatcgtcttatttcttggctcctgaaagatccagtgatatcacactagtgttatctgatgggttgtttgaccaatggaacaacctccaagttctgcagttgtcatattgtgacttcagctttgcatcaccaccttttattggttgccagaatctaagatttattgggcttgaccactgtaaagataaaaaagaaggatgcaaacaaagtgacctaaggaagtggcagtttctccatagcttattagttttggatctcattgacactatctggtaccaagtattttccgaagacatggcagatctttttgttaaccttagggagctaaatatagtaggagtttattgctctcacatatggggccagctacaaaataagattgaatatgttgatttgtctaggaaaaggaatataaaacttccttccactctaagattcttcaggcttgatgaccgtcaacctacaccgcagtccacaccgggcattgaattatcgctaaaaggttgcatgggattggaaagtttattcctgagtcgaatatccaacctcacggagctggacctctccggaactgcaatcaggatacttgacttcacagctatggtggtggaagtctcaggtttgaaacgactatttctgctaggatgcaagcaactccaagcaataaaatgggacaatagtggttcaacgataaagccggacctagagttgttgtgcgttgacacaaggtctagaagtaaatatcctcagttatttgttgacaagaataaatcccccggtttcttgtcagtccatgctgttattgtggacgcgagaattgctcggtccttatgcgctctaatagagaactcatatcatgttgatatgcatatccatgtcacctcttcgaccatatatggtgaagttcaatccgaaggaacctacaaagatagcattagccaattaagtgatcatgtgaacatgcagcaacaagaccttatttcagcaggccagtaccatgatgtccaacttagcatggttggcgatgtcccaatgcagtcattcccccttcctccgacaacaatgttgagccgccatatcgagattgcacaggggagccacaacctggagagcgagctggatgatgattcaccgattcttactttagctcatctagtgcaggggaaggctgagtcactgcatgtgcatgatctctcaaccatcactcctttgcccggaggacaatggtgctgtctcaagtggtgtcgtatagagaggtgcccgaagatagaaattgtcttccctaaacacgcatggaatttctacggtctggaaaccgcctgggtgtcggatctcttgatggcccgttgcatctggagtaaaggttctctccagtacagtggttccttccaaaatctgcagcacctgcacctgcgcagctgcccaaggctccagttcgtgctcccggtgtgggcctcctccttcccggacctgaaaaccctccacgtcatccactgcagcaacctccacaacatcttcgtgctggacggagattacccagagcaaataaccgtcgaaggtgtagcattcccgaagctaaccaccatccacctgcacgacctcccgatgctgcggcagatttgcgacgtcgagttcaagatggtggctcccgcgctcgagaccatcaagatcaggggatgctggggcctgcgccggctgccggccgtcgctgcggatggaccgaagccggccgtggagatcgagaaggacgtgtgggacgcgctggagtgggacggggtggaagccgaccaccacccttccctcttccaggcgccggtgcactcgcgctactacaggaagaagctgcccaggggctccgtcctcaggtatatatacggtgcatgcatcggaccatgtacctag</cdnaseq>

Protein Sequence

<aaseq>MIKANVNWDTFDWAVQGILEHFVKNQRDTRVIYFDGWRGFGASA VLRAVADELTSRGAWPELHIDKVIQIDCSTWKSRRAMQRAIAVELKLDDSVIEIIDKT DEEDDFKGVDEGSRSEIMSVAEVIDQVLRDHKFMVAFHNGSGDYIDLGSFGFPQITLF RSNLILWTFRKRFQGRERYSEIKDKVKNTHLFAFETEYYITRNNILFPVLQKEAAAIA AHYPCMREIDPERIVHCCLYGLFLYLCLPKHLENEWAARASVYWMCDGIIQGDQAWEI SAALSKEIKWDLQPSLQDEVRQEFIESSSKNSVSIQRFKNRYFDGQKFYPWITITASN NINPETLQDIRSKNAEASSYFLAPERSSDITLVLSDGLFDQWNNLQVLQLSYCDFSFA SPPFIGCQNLRFIGLDHCKDKKEGCKQSDLRKWQFLHSLLVLDLIDTIWYQVFSEDMA DLFVNLRELNIVGVYCSHIWGQLQNKIEYVDLSRKRNIKLPSTLRFFRLDDRQPTPQS TPGIELSLKGCMGLESLFLSRISNLTELDLSGTAIRILDFTAMVVEVSGLKRLFLLGC KQLQAIKWDNSGSTIKPDLELLCVDTRSRSKYPQLFVDKNKSPGFLSVHAVIVDARIA RSLCALIENSYHVDMHIHVTSSTIYGEVQSEGTYKDSISQLSDHVNMQQQDLISAGQY HDVQLSMVGDVPMQSFPLPPTTMLSRHIEIAQGSHNLESELDDDSPILTLAHLVQGKA ESLHVHDLSTITPLPGGQWCCLKWCRIERCPKIEIVFPKHAWNFYGLETAWVSDLLMA RCIWSKGSLQYSGSFQNLQHLHLRSCPRLQFVLPVWASSFPDLKTLHVIHCSNLHNIF VLDGDYPEQITVEGVAFPKLTTIHLHDLPMLRQICDVEFKMVAPALETIKIRGCWGLR RLPAVAADGPKPAVEIEKDVWDALEWDGVEADHHPSLFQAPVHSRYYRKKLPRGSVLR YIYGACIGPCT</aaseq>

Gene Sequence

<dnaseqindica>479..490#1369..4308#gtgctcgcgctcgcgcagaagcccatctatccaagcattccaattgctgctgcttccatcggtcggccagaattgctgcatgctgttgtcttaagttatttggagcattcttcagttcgtccatctagcctgacttcatacttgcttcacctggctcagggcctctggcgctctgctctatatatatactcaggtacgtattagtaataactaattatatttcttgtaacaatgcatcaacttaattaatttgcggctcgctcgatcagtgttacttagtttatttgttcatcgatctttgaaaaaaagaagaagcagttctactgattatatatcaaaacatcaattgattatatatggttgatgtaattgttgtgtatatgtgtgtaggtggcgagtggaattgatcggttgatacaatctgatacgatgggttagattaattgattttctgacgattctcctcttcctgatcaccatgattaaagctgtacaccttctaattgcactttcacattctcgaattatatagcatgtctatttctgtgtttatttccttttatttgatcaattgatttgagacgttgatggcttaacgtgcgcacataacatcaatattagtcgtccatatatatatatattcgcgattataattaagtatataagtgccggaatatatcttggcttggggagggggcttattaattagcgccaaggtgtgaaatggtttagctagcatattaaaacaaaataatatgcatgcatgatgttgtttcaatggcctaaaggaactggcatgcatcgatgtttgccaatttttatctctagtaaagaaaagcaaagtagatccccacatgctcagaacttgtttattatttttatttgaacagaacaaaattcactagcagctggtgataaaaaccagttgattacatatgcactatacctatagcatatgtatgtatgtgcaagttaaccatgtatcatcgacctatcgagcacgctgacgttaaccaagcaagatggtccgtgaatagaaaagcacagacactttattctctttttccttcaaaaataaaattcttcaaaaatgacacatagtttgttaaattcggactccactaagaccccgaatgccagaaatatttttcctacatccgaaggcatcatgattctccggtaaatgatttacaaaaaaactagatgagtgcatatctctcattagctttgttttgtaccgtgttagctagtacgcctgcttcagcaactcctgttgagtgcaggggacattgtagagcaagatagttgttggtgtcctctgtaatataaagtcaatcttacacagtctaatttctattattatggcagaatgtaaattgggatacttttgattgggctgtgcaagggatacttgaacattttgttaaaaatcagagggacacaagagttatatattttgatggctggcgtggttttggagcatcagcagtccttagagctgtagcagatgagcttacatctcgaggagcttggccagaactacacattgataaagtaatccagattgactgctctacatggaaaagtagaagggcaatgcagagggcaattgcagtggaactcaagcttgatgattcggtaattgaaattattgataagacagatgaggaggatgattttaagggagtggatgaaggctctagaagcgagataatgagtgttgcagaagtgattgatcaagtcctcagggatcacaaatttatggttgcttttcataatggaagtggtgattacattgatttaggtagctttgggttcccgcaaattacactatttcgttccaatctaatattatggacctttcggaagaggttccaaggaagggagcgttactctgagataaaagacaaagtgaagaacacccatttattcgcatttgaaacagagtattatataacaagaaacaacattctcttcccagtactgcaaaaagaggctgctgccatagctgcccattatccttgcatgcgggagatcgacccggaaaggatcgtgcattgctgtctatatggactatttctctatctttgtttgcccaaacatttggagaatgagtgggcagcccgagcatcagtgtactggatgtgtgatggcatcatacaaggtgatcaggcatgggagataagcgctgcactttcaaaagaaataaagtgggatctacaaccttctttacaagatgaggtgcgtcaagaattcatagaatcatcctcaaaaaactctgtaagtatccagagattcaaaaacagatactttgatgggcaaaagttttacccttggatcacaatcactgcatcaaataatattaatccagaaacactacaggacatccgatccaaaaatgcagaggcatcgtcttatttcttggctcctgaaagatccagtgatatcacactagtgttatctgatgggttgtttgaccaatggaacaacctccaagttctgcagttgtcatattgtgacttcagctttgcatcaccaccttttattggttgccagaatctaagatttattgggcttgaccactgtaaagataaaaaagaaggatgcaaacaaagtgacctaaggaagtggcagtttctccatagcttattagttttggatctcattgacactatctggtaccaagtattttccgaagacatggcagatctttttgttaaccttagggagctaaatatagtaggagtttattgctctcacatatggggccagctacaaaataagattgaatatgttgatttgtctaggaaaaggaatataaaacttccttccactctaagattcttcaggcttgatgaccgtcaacctacaccgcagtccacaccgggcattgaattatcgctaaaaggttgcatgggattggaaagtttattcctgagtcgaatatccaacctcacggagctggacctctccggaactgcaatcaggatacttgacttcacagctatggtggtggaagtctcaggtttgaaacgactatttctgctaggatgcaagcaactccaagcaataaaatgggacaatagtggttcaacgataaagccggacctagagttgttgtgcgttgacacaaggtctagaagtaaatatcctcagttatttgttgacaagaataaatcccccggtttcttgtcagtccatgctgttattgtggacgcgagaattgctcggtccttatgcgctctaatagagaactcatatcatgttgatatgcatatccatgtcacctcttcgaccatatatggtgaagttcaatccgaaggaacctacaaagatagcattagccaattaagtgatcatgtgaacatgcagcaacaagaccttatttcagcaggccagtaccatgatgtccaacttagcatggttggcgatgtcccaatgcagtcattcccccttcctccgacaacaatgttgagccgccatatcgagattgcacaggggagccacaacctggagagcgagctggatgatgattcaccgattcttactttagctcatctagtgcaggggaaggctgagtcactgcatgtgcatgatctctcaaccatcactcctttgcccggaggacaatggtgctgtctcaagtggtgtcgtatagagaggtgcccgaagatagaaattgtcttccctaaacacgcatggaatttctacggtctggaaaccgcctgggtgtcggatctcttgatggcccgttgcatctggagtaaaggttctctccagtacagtggttccttccaaaatctgcagcacctgcacctgcgcagctgcccaaggctccagttcgtgctcccggtgtgggcctcctccttcccggacctgaaaaccctccacgtcatccactgcagcaacctccacaacatcttcgtgctggacggagattacccagagcaaataaccgtcgaaggtgtagcattcccgaagctaaccaccatccacctgcacgacctcccgatgctgcggcagatttgcgacgtcgagttcaagatggtggctcccgcgctcgagaccatcaagatcaggggatgctggggcctgcgccggctgccggccgtcgctgcggatggaccgaagccggccgtggagatcgagaaggacgtgtgggacgcgctggagtgggacggggtggaagccgaccaccacccttccctcttccaggcgccggtgcactcgcgctactacaggaagaagctgcccaggggctccgtcctcaggtatatatacggtgcatgcatcggaccatgtacctagctagctgctccatcttgatttatttgcataatacttgttctcagttatttcatttgtttgatctgtgcttaatcaatttgctttctctgtctactgttatatttgttgcctaggtgaattgaatccctgggcttgggcggccatgatttggggattgattggcgacgaatgatggtgaatcagtgagatgcttcttgcttgcttctgttgggtgatttgtctccggtgatgttgcagcaagctttgtggtgtgagctgtgtgacgggcacggactgaccgtggctcgatcttgtcctcgtatatggccgagttggccagagagcgagattgccatggctctgaaataataagcggctttgtttgtgcgtggatgcacagaccagctgattgagtgagtgtgtgtttcttgaatttaattagcattctgggtgtggatgctcagatgcatgtgtgtgtgtggcttgatatgatgatctgctttgcgtttgaaacaataataagcagtagccatttgtgcctgcgagcatatgtatgtggctgctgcagtgtgactgtgtgagagtgcattgcttgtgtgtaactgaattctgaagattctgaacagatgagcagctggttgtgtgtgcttgcttgcatgcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0431700, RefSeq:Os04g0431700