Os04g0432400

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0432400| Description = Plant neutral invertase family protein| Version = NM_001059365.1 GI:115458459 GeneID:4335880| Length = 4413 bp| Def...")
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Gene Name

Os04g0432400

Description

Plant neutral invertase family protein

Version

NM_001059365.1 GI:115458459 GeneID:4335880

Length

4413 bp

Definition

Oryza sativa Japonica Group Os04g0432400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21473847..21478259

Sequence Coding Region

21474045..21474343,21474810..21475371,21476632..21477066,21477633..21478061

Expression

GEO Profiles:Os04g0432400

Genome Context

<gbrowseImage1> name=NC_008397:21473847..21478259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21473847..21478259 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggcggggatgaggaaggcgtcgtcgcacgcgtcgatggcggcggcggcggcggacccggacgacttcgacctgacgcggatgctgaaccaccggccgcggatcaacgtggacaggcagcgctccttcgacgaccgctccctcgctgagctctccatctccggcacggccagccgcggcggcggcggaggagggtacccggcgatgatggagagctacgagagcatgtactcccccggcggcgggctccggtccctgtgcggcaccccggcgtcctccacccgcctctccttcgacccccaccccctcgtcttcgacgcctgggacgccctccgccgctccctcgtctgcttccgcggccagcccctcggcaccatcgccgccgtcgaccactcctccgacgaggtcctcaactacgaccaggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggggagccggagatcgtgaagaacttcctgctcaagacgctgctgctgcaggggtgggagaagcggatcgacaggttcaagctgggggaaggggcgatgccggcgagcttcaaggtgctcaaggacgcgaagcgaggaggggcggagcggctggtggcggacttcggggagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctccgcgcgtacaccaagtccaccggcgacctgtcgctggcggagacggcggagtgccagcgcgggatccgcctcatcatgaaccagtgcctcgccgagggcttcgacaccttccccaccctcctctgcgccgacggctgctgcatgatcgaccgcaggatgggcgtgtacgggtacccaatcgagatccaggccctcttcttcatggcgctacggtgcgcactgctgatgctgaagccggacgcccccgaggggaaggagacgatggaccgcgtggcgacacggctccacgcactcacctaccacatgcggtcctacttctggctcgacttccagcagctcaacgatgtctaccgctaccgcaccgaggagtactcccacactgcggtcaacaagttcaacgtcatcccggagtccatcccggactgggtgttcgacttcatgcccagccgcggcggctacttcgtcggcaacgtcagccccgcccggatggacttccgatggttcgcactgggcaacttcgtcgccatccttgcgtccatggcgacgcccgagcaggcggcggcgatcatggacctcatcgaggagcggtgggaggacctcatcggggagatgccgctcaagatcagcttcccggcgatcgaatcacacgagtgggagttcgtcaccgggtgcgaccccaagaacacccggtggagctaccacaatggcggatcctggccagtgctcctgtggctgctgacggcggcgtgcatcaagacggggaggctgaagatcgcgaggcgggcgatcgagctcgccgaggcgaggctggcgagggacgggtggccggagtactacgacgggaagctgggccgctacgtgggcaagcaggcgaggaagctgcagacgtggtccgtcgccggctacctcgtcgccaagatgatggtggaggacccctcccacctcggcatgatctccctcgaggaggacagggccatgatgaagcccgtcctcaagcgctccgcctcctggaccgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MEVAGMRKASSHASMAAAAADPDDFDLTRMLNHRPRINVDRQRS FDDRSLAELSISGTASRGGGGGGYPAMMESYESMYSPGGGLRSLCGTPASSTRLSFDP HPLVFDAWDALRRSLVCFRGQPLGTIAAVDHSSDEVLNYDQVFVRDFVPSALAFLMNG EPEIVKNFLLKTLLLQGWEKRIDRFKLGEGAMPASFKVLKDAKRGGAERLVADFGESA IGRVAPVDSGFWWIILLRAYTKSTGDLSLAETAECQRGIRLIMNQCLAEGFDTFPTLL CADGCCMIDRRMGVYGYPIEIQALFFMALRCALLMLKPDAPEGKETMDRVATRLHALT YHMRSYFWLDFQQLNDVYRYRTEEYSHTAVNKFNVIPESIPDWVFDFMPSRGGYFVGN VSPARMDFRWFALGNFVAILASMATPEQAAAIMDLIEERWEDLIGEMPLKISFPAIES HEWEFVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRLKIARRAIELAEARLARD GWPEYYDGKLGRYVGKQARKLQTWSVAGYLVAKMMVEDPSHLGMISLEEDRAMMKPVL KRSASWTV</aaseq>

Gene Sequence

<dnaseqindica>3917..4215#2889..3450#1194..1628#199..627#agccgaagccgatcgagccagagaccgacctctcctccgccgcaccgaactccggcgagcccacgtgaacaccaccactctccgacgaccgtgcgtctcgttgcgtttggcttctcttctcgtcgtcgtcgtcgtcgtcgcgtacgtacggtgtggttcttgagggcggacgcgacgacggcggcggcggtgtacgagatggaggtggcggggatgaggaaggcgtcgtcgcacgcgtcgatggcggcggcggcggcggacccggacgacttcgacctgacgcggatgctgaaccaccggccgcggatcaacgtggacaggcagcgctccttcgacgaccgctccctcgctgagctctccatctccggcacggccagccgcggcggcggcggaggagggtacccggcgatgatggagagctacgagagcatgtactcccccggcggcgggctccggtccctgtgcggcaccccggcgtcctccacccgcctctccttcgacccccaccccctcgtcttcgacgcctgggacgccctccgccgctccctcgtctgcttccgcggccagcccctcggcaccatcgccgccgtcgaccactcctccgacgaggtcctcaactacgaccaggtataccaagtcctcaacttctagcagccatagggtctgtttggaggagcttttagctgctgcaactttacccagaattagaagtttcctcaaatagtccagcttttagactagattcttagaagctgtagatgtagaatccagaaaatgaactagaaatcagaaactgaaaaacccagcttttttctagattcttagaagctagctaccaaccagctgcttctcagaattttaattttaagctccccaaacatgcccatagtctcccacggacgtaatcttgagctcctcaaacaattcacatgtgttcaaaattccggaataaattttcgaaattttgttcctatcggaaaaccccaaaatttttaaattattacattttaatttagtaaaatttgttcaaatttaaacaaattttatttaaaaattcaaataatctcatcatatcagcacccccgatacaaatgccaaaaacgaaagattgaaccctgctaccaatcagcatatattctcaaaatcttaaaagcaacaatctgatcgatgaaactgcacgcatatacacgcaggtgttcgtgagggatttcgtgccgagcgcgctggcgttcctgatgaacggggagccggagatcgtgaagaacttcctgctcaagacgctgctgctgcaggggtgggagaagcggatcgacaggttcaagctgggggaaggggcgatgccggcgagcttcaaggtgctcaaggacgcgaagcgaggaggggcggagcggctggtggcggacttcggggagagcgccatcgggcgggtggcgccggtggactccggcttctggtggatcatcctcctccgcgcgtacaccaagtccaccggcgacctgtcgctggcggagacggcggagtgccagcgcgggatccgcctcatcatgaaccagtgcctcgccgagggcttcgacaccttccccaccctcctctgcgccgacggctgctgcatgatcgaccgcaggatggtatgtactactgtcgttcgttcgtcctcactagcttcatgtttgttcgttattgttgattatcatgatcgccgtaatttatctagtttttcaattaaaaaaactgattttctttttggatttatatgttactccttccgtttcaggttataagacgttttgactttggtcaaaattaaactgctttaaatttgatcaagatggtagagaaaattagtaacactttcaacccaaagcaaatttattatgaaaatatattcaattattgatttgataaaactaatttagtattataaatattactatatttgtctataaatttagtcaaatttaaaacagactaaaatcaaaatgtcttataacttgaaacggagggagtagtattgttgataatgatcaccataattaatctagtttgtcaatttaaaaaaaaaacttattttttacacctatatgttattattgttgataatgatcaccatatctacttttatatgccatcaaagagttaaaaaaaatagtttgtgctgatcattttggcatcagttgctaaatgaattttgggtgaggctccttaccggatgaatttagctgccagaaaaaaaaaagtttctgctttagctgataataaagaacataatgctgaaaaattttgttactgatcactgtctggttaattgatcccaataatcaaaacagaaaaaaaaagcactgtttgtacatgcatgcagctactgcagctcggtcaaactaaccgtaaccatccatatcctaatcgatagaaattaaaacgactcccattcccagaaataaatcgataactacacatttacgctgatggatacgatctgacaccgacggtgtcgtggtcaccatggaatcgaaactgaactctctgaaaaatgaaatgaaaagccaacgcagtgccaacaagcagcatcgacgcttctcgagtggtgaaatgctaccgcacggcaccagcaaagcaccaagaagatcctgcggacactaatactgctagtcgtatgagagatatggaaggaaaggaaccgcatgatctttcggcgactagcctaatagccaaaattaaggagaggccaaaacatgaatcttgacgaacacaaagcatctacggtagctggcttacgttttagcaatctcgggcaaaaggctttgagcctttacatttttttctcttgcgcctgaatagttttactccttttttattcaataaaaatttaaatgattttttttttgcagggcgtgtacgggtacccaatcgagatccaggccctcttcttcatggcgctacggtgcgcactgctgatgctgaagccggacgcccccgaggggaaggagacgatggaccgcgtggcgacacggctccacgcactcacctaccacatgcggtcctacttctggctcgacttccagcagctcaacgatgtctaccgctaccgcaccgaggagtactcccacactgcggtcaacaagttcaacgtcatcccggagtccatcccggactgggtgttcgacttcatgcccagccgcggcggctacttcgtcggcaacgtcagccccgcccggatggacttccgatggttcgcactgggcaacttcgtcgccatccttgcgtccatggcgacgcccgagcaggcggcggcgatcatggacctcatcgaggagcggtgggaggacctcatcggggagatgccgctcaagatcagcttcccggcgatcgaatcacacgagtgggagttcgtcaccgggtgcgaccccaagaacacccggtggagctaccacaatggcggatcctggccaggttagttattttgtacttcgattgtttctatccttagaaaatataataccttccgataccttattaagaatgataaaattacatcctacaaatccctccctttgaagtcacggaaacatgctgttccgaacgtgtttcaagtcatgttttaagaattttgaacattttcttttgaggggaagaaaaaaaaattgaacattgatattttctttgaaaaatgattagaccattagaagtatgaaaaccatatgcatttaatttttctgtaaaaaaaacatttattagtactacaatgacgcacccaaatctgctcacatttttcttttcttaaaacaattttaacgattttttagttggcatgtataaaacgagtgtacgatccactcgagtgaccaaatgagtagttatctcatctaacgatccgagcatgtttgttttgtgttgtgtgttaatttgcggcggccagtgctcctgtggctgctgacggcggcgtgcatcaagacggggaggctgaagatcgcgaggcgggcgatcgagctcgccgaggcgaggctggcgagggacgggtggccggagtactacgacgggaagctgggccgctacgtgggcaagcaggcgaggaagctgcagacgtggtccgtcgccggctacctcgtcgccaagatgatggtggaggacccctcccacctcggcatgatctccctcgaggaggacagggccatgatgaagcccgtcctcaagcgctccgcctcctggaccgtgtaaattactaattaattatggtgaaaaaactttgattgatccatgcaaaaaatagtacagaaagaagaaaatgtgtttgttttgggggattttccgctttttcacaaaccattcgttccgaatttggaaggcgtggtttgggctagctatatggttgtgatcagttgtacactatgtaattaatgatcaaacatagggggg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0432400, RefSeq:Os04g0432400