Os04g0434800

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0434800| Description = Similar to Thylakoid-bound ascorbate peroxidase (EC 1.11.1.11) (Fragment)| Version = NM_001059379.2 GI:297602781 Gene...")
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Gene Name

Os04g0434800

Description

Similar to Thylakoid-bound ascorbate peroxidase (EC 1.11.1.11) (Fragment)

Version

NM_001059379.2 GI:297602781 GeneID:4335896

Length

4278 bp

Definition

Oryza sativa Japonica Group Os04g0434800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21645173..21649450

Sequence Coding Region

21645594..21645614,21645815..21645919,21646047..21646124,21646213..21646287,21646784..21646870
,21646967..21647034,21647354..21647441,21647560..21647660,21647746..21647866
,21648964..21649122,21649227..21649403

Expression

GEO Profiles:Os04g0434800

Genome Context

<gbrowseImage1> name=NC_008397:21645173..21649450 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21645173..21649450 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcccagcgactcgccgccctccacgccgccgcgccgtcggccttctcctccacctcctccgcctcgcatggccgccccgcggcgcgatccagcaccaccgctctcctcccggtggccctcccgcgcgcctccgccaccctccgcgccgcaccttctcggctcctcccccaggaggcgaaggcggcggggagcggcaggtcggtgatgtgcatggcgtcggcgtcggcgtcggcggcgtcggcggcggtggcgtcgggcgcggcggagctgaaggccgctcgcgaggacatcagggagctcctcaagacgacgcactgccaccccatcctggttcgtcttggatggcatgattccggtacgtatgacaagaatattaaagagtggccacaacgaggtggagctaatggaagcttgagatttgatgttgagttaaaacatggagccaatgctgggctggtaaatgctctaaagcttgtccaacctatcaaggacaaatacccaaatatctcatatgcggatttattccagctggcaagtgctacagcaattgaggaagctggtggtccaaagattccaatgacatatggacggattgatgtcacaggtcctgagcagtgtccacctgaggggaagcttcccgatgctggcccaagtgcacctgcggatcacttgaggaaggtattttacaggatgggtcttgatgacaaggagattgttgtgctgtctggagcacatacacttggaaggtccagacctgaacggagtggctgggggaaaccagaaacgaaatatactaagaatggccctggtgcacctggtgggcaatcgtggacagctgaatggcttaagtttgataacagttatttcaaggagataaaagagaaaagagatcaggatctcctggtcttgcctacagatgctgcattatttgaggacccaacattcaaggtctatgcagaaaaatacgcagaggaccaagaagcattctttaaagactatgccggagctcatgctaaactgagcaatctgggtgcaaaattcaatcctcctgagggattcacgttggacggttaa</cdnaseq>

Protein Sequence

<aaseq>MAAQRLAALHAAAPSAFSSTSSASHGRPAARSSTTALLPVALPR ASATLRAAPSRLLPQEAKAAGSGRSVMCMASASASAASAAVASGAAELKAAREDIREL LKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGLVNALKL VQPIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAG PSAPADHLRKVFYRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGG QSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKD YAGAHAKLSNLGAKFNPPEGFTLDG</aaseq>

Gene Sequence

<dnaseqindica>3837..3857#3532..3636#3327..3404#3164..3238#2581..2667#2417..2484#2010..2097#1791..1891#1585..1705#329..487#48..224#aaggccacgctcccctccctcccaccaacccaccaccagcgtcacccatggcggcccagcgactcgccgccctccacgccgccgcgccgtcggccttctcctccacctcctccgcctcgcatggccgccccgcggcgcgatccagcaccaccgctctcctcccggtggccctcccgcgcgcctccgccaccctccgcgccgcaccttctcggctcctcccccaggtccgtgtcggctcggtcttgggtggtggttgggttggggtttgggacgccctggttgtttgttgttgttgactcgtgctctggctgtgtgtgtgtgatcgcaggaggcgaaggcggcggggagcggcaggtcggtgatgtgcatggcgtcggcgtcggcgtcggcggcgtcggcggcggtggcgtcgggcgcggcggagctgaaggccgctcgcgaggacatcagggagctcctcaagacgacgcactgccaccccatcctggtatgatctcgtctcgtgtacacgcaccacgcgatgcggctttggttgctccgaaacttctccttcatatcagcatcaccatgtgggagatttgattcggtagcagaggagccatctggccgatcgcctttgcaaccaaggattgcacatgagaacaaactcagctcggagacagcgatgttatgagtttgtgaacacactgaattttctctctggagacagtgatgtcatgaatctgtgaacacactgaatatgctctctggagcaatgctggaatttaacatcacgaggaagtaatttcatgaccagcttgcctctcaaataggattttgacctctagaaatagcgtattgtcgtaaatcaccaatgtgtaacgacagttcaattgttaagtctgatctcatctgtactgacgagtaggttgcacatgtcacaaatggcttgtgagagttaagagttgtattgaaagtttgaaactataaattcattcatcacgtatcctatcatcatttattgtttgtggtgataactgatactaacacttgcagcagcttttcccagtgagactatcaagtatcatgtgagttactctgtccgttctcaaatataagtatttctagccagaaatgcttacatttaggaacgtaggtcgtgcttgtgtaaattgttaggctgtgttcaattagttatcagatggtacaagtaaattctaaggaattaggcaatatgaatgcggcgttgaataattaatgacagcagaacaacattatcatagcactaggacataagtccagttcattggttatttccatgctattttaccttcatatggtcatggctatgatatgccagcttgctgaagttaaaggtgttaatagggctgccatttatccaaataatcaccattgactgaacttgtactgtcgtacattttgaatttgcaaatactgaatgcaatgcaacgggggtagaccacggcaccatttcctattgtttagttccattcaaacccttgcatgtgcacaatcaattggctttctactccagtttctctatatccacggtggttaaaatgttattcctttgcctgcatgaaggttcgtcttggatggcatgattccggtacgtatgacaagaatattaaagagtggccacaacgaggtggagctaatggaagcttgagatttgatgttgagttaaaacatggagccaatgctggtaacattaccttttcacgatttcgtttccttgttgcttgtaagtgtactttcagcaactaaaaatcctgattgaattattgaagggctggtaaatgctctaaagcttgtccaacctatcaaggacaaatacccaaatatctcatatgcggatttattccagctggcaagtgctacagcaattgaggtctgatcccctcacgcccccaaaaaataatgaaaaatgaagtacctaactagtctggttttaatgtacgaacactatattctaccttaatgatccatttttgtcaaacttgtactaggaagctggtggtccaaagattccaatgacatatggacggattgatgtcacaggtcctgagcagtgtccacctgaggggaagcttcccggttagcaacttatgtttcactggattttccaaaacactaacatctgtactgatatcctgtcttgcttacttcataattgttctttttaatttttaaatgtaaaggttcctatgtacattgtctctcatcagcttaatatatcaaccgaccttattttttcccttggaaaattatgggatagtttttattgccacgctaacaggcataaaactgttcttacatataggggtatttaggaaatattgcaccagcatcatactcaatcccttaaaactgatgcttgctaactttcagttatccttcccttttggttgctcagatgctggcccaagtgcacctgcggatcacttgaggaaggtattttacaggatgggtcttgatgacaaggtgtgcaaatgagattctagttaaccagatgttttcccatttgctttgttttatgtgatgttgagttgcatgtgccccgcgatgctgtgcctacaggagattgttgtgctgtctggagcacatacacttggaaggtccagacctgaacggagtggctgggggaaaccagaaacgaaatatactgtatgttcttcttatctttattttcttatgtgagaaccgagttttgagcatgatctcagttctatccactgtttcaatgtattcccatgttaagtctatcattgcatatcatgtcatcatttttgcaacaaggagtcaaggaccacttagtacttcatgatgttttatgctttcagtacttaatgtctctgcttaaattacccttattcctcaggaaagaaactacgtgtattaatttcaagatgtgtacatagctacagactagagtaaatcagaactccatacgttttagatatttttccttggcctctgctccgatggttttggctgaaggatgtactttttgctcacataatctctatatattctctgcaaaatatcgtgccgcctctgcaactccatgaagcaacatcaactccaagtgcatttgtctttatggttagactggattggacaaatcttgagctttttcaccttttttttcttactttttcagaagaatggccctggtgcacctggtgggcaatcgtggacagctgaatggcttaagtttgataacagttatttcaaggtacgtgccacttttcccttattcttcatgtcggatgattcatatgattttgcatgatgtgagctggtgcctggtggcaatactgcaggagataaaagagaaaagagatcaggatctcctggtcttgcctacagatgctgcattatttgaggacccaacattcaaggtgaataatgcttaaactgtactctcacttcccgaaataaaccaatctcgtactaggatatgtcaggatcatttgaaaattgaaataattattgaactaactgtctgagaattcaccgcacattcaggtctatgcagaaaaatacgcagaggaccaagaagcattctttaaagactatgccggagctcatgctaaactgagcaatctgggtgcaaaattcaatcctcctgaggtgagtgataacatcttgtccttagttttcctttccacaacacgccactcttgaccgactgggccacagttagtagagatagtttatccgacaaaccactgccaagttgtttttacccccgatgactagcgcccaatcctagtccgtggtccttctgttgtggcaaactgagagtatgtgactgtttggttgtcctgcagggattcacgttggacggttaatgcgatgcgcatgagccagatcgctgaagtggccaaccacttttacagaaaggtctatatactctactaccccatccacctcccaatttgtaggttcatgtcagctgttctacttactcgatactgtgattcaacagaaggttcgctcggttcttggctaaaatgattccaatctgctatttatcttgctcgtaggatcaagagagaaacactacacaatccaatttcctgctccaacgttgtgtcatcattccagatgaagcttttcctgaccacgagtcatattggatttggaaactgagtattcgaataaaaaaacagactggctagagaggcaaatttgagccgaacttgcggaccaaattcgacgagaaaccaaaaagaaaaacattttaatactattctttacttattatgcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0434800, RefSeq:Os04g0434800