Os04g0438300

From RiceWiki
Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0438300| Description = Protein of unknown function DUF150 family protein| Version = NM_001059397.1 GI:115458523 GeneID:4335917| Length = 23...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0438300

Description

Protein of unknown function DUF150 family protein

Version

NM_001059397.1 GI:115458523 GeneID:4335917

Length

2357 bp

Definition

Oryza sativa Japonica Group Os04g0438300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21815107..21817463

Sequence Coding Region

21815287..21815601,21815757..21815865,21816076..21816251,21816365..21816447,21817104..21817404

Expression

GEO Profiles:Os04g0438300

Genome Context

<gbrowseImage1> name=NC_008397:21815107..21817463 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21815107..21817463 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttggtcgcgggaggagtgattcgcggactcccgtcatcctgggaacgcatcagatcgccgaggactccgctctttctcagttcttgggcttctcgccgccgcgttgcttttgcggcgtgctcgtcatgcccgctggttgtttgtcgaaatgcctcagcggtggtgccgttcgccaagaaaaaaaggaaggggggaagtgaggagccgcctgatgaggaggagggtgatgattttgttgatgagatggagggtgaagacgatgatgatgaggaggaggaggatgttgatgatgatgatctattggatgataacgaggatgatgatgatgactattcttttgaagatgattttgagagtgatgatgaacaagatctttatgttggggatggaggtgctggtggcggaatatcacttgctggcacatggtgggataaggaagcattggctttggcagaggaggtctcaaattcatttgatggagacttaaaaatttatgctttcaagacagctgctaatttaaccatcagagtacgcattgagaagatgtcaaccaggtatggttctccaaccatagatgatatcgaagcgttcacaattgcataccgtgcaaagattgatgatgcagagtcagcaggcaggataccacaaaacatatccttggaggtgtcatcccctggtgtggagagggttatccgcatccctgatgatcttgaacgcttcaaagaacgggccatgtatgtcaggtacaccattacaagcgacggcggagaagggatgacgcctcaggaaggcgatggagttttcaggctcatctcctacgacatggacctgtgcgagtgcacctggggtatagctgatgtgaagatcaacaggcagcaggccggcaagggaaggcccctgagcaagaagcagagggagtggcggctgcagacgccatttgagtcactgaagttggtcagggtgcattctgactgctga</cdnaseq>

Protein Sequence

<aaseq>MDLVAGGVIRGLPSSWERIRSPRTPLFLSSWASRRRVAFAACSS CPLVVCRNASAVVPFAKKKRKGGSEEPPDEEEGDDFVDEMEGEDDDDEEEEDVDDDDL LDDNEDDDDDYSFEDDFESDDEQDLYVGDGGAGGGISLAGTWWDKEALALAEEVSNSF DGDLKIYAFKTAANLTIRVRIEKMSTRYGSPTIDDIEAFTIAYRAKIDDAESAGRIPQ NISLEVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGEGMTPQEGDGVFRLISYD MDLCECTWGIADVKINRQQAGKGRPLSKKQREWRLQTPFESLKLVRVHSDC</aaseq>

Gene Sequence

<dnaseqindica>1863..2177#1599..1707#1213..1388#1017..1099#60..360#atgccgcttggttactcgcatacacacactggcgcgcgcgcgaaatcgataattctgcgatggatttggtcgcgggaggagtgattcgcggactcccgtcatcctgggaacgcatcagatcgccgaggactccgctctttctcagttcttgggcttctcgccgccgcgttgcttttgcggcgtgctcgtcatgcccgctggttgtttgtcgaaatgcctcagcggtggtgccgttcgccaagaaaaaaaggaaggggggaagtgaggagccgcctgatgaggaggagggtgatgattttgttgatgagatggagggtgaagacgatgatgatgaggaggaggaggatgttgatgatgatggtatggctggcaaattctggttatatctctttgttttgtttgtgggaatctttcagtactgggcagagggggggagggggggggggctgtttgggtctctgcatttagcctacatttctttcatcattcggtctggaatcctggatgttcatatgggcatgcattctgaatactagattatatttaaggccagctactcgagtagattatatgtagacagaggccataaataatgctgcaatatgtgtgcgaactcattccgttaattcgagaggtccgtggttctgagtcctgatgcaattaattggacatagcttgccaaatcggctatcgtcccaaaattgacctcctcatttcggtctatgattcttgaacagataggattccttgctttcatagcccattgttagttcaccttgatatttctaattacaaacagttagcatgtgcaataattaatttgagctgtagaataaccgaatagttaacgtcttgctgagtttatttacacagtactcaatctttcaacagaagcatccttgcttgctaaacctgctaatatacaccctcagctatcatgaaaagttccagtccattgacctaccatgtagtattagctattttaaaaaagtaactgtacccctcaaaacatgcagatctattggatgataacgaggatgatgatgatgactattcttttgaagatgattttgagagtgatgatgaacaagatctttatgtaagtgatacttttacctgttgaaaaatgcaacctttaccagagaacattggaagatggaggtcctaaaaaaacattgaccaatagccatacattttcattggtaactggaggttggggatggaggtgctggtggcggaatatcacttgctggcacatggtgggataaggaagcattggctttggcagaggaggtctcaaattcatttgatggagacttaaaaatttatgctttcaagacagctgctaatttaaccatcagagtacgcattgagaagatgtcaaccaggtatatatcaatatcagtatctatgcaacaatatgcggtatttacagtttttattgtgtatgtccaaccatgtttttcaaagatataacatgttatgagttagttgcatatatcactgaggtcaaaggttttttttttcctctttttggtagctttgttctcagtttagcaccattgatctaaaatttctcatgaaccacatgctattaggtatggttctccaaccatagatgatatcgaagcgttcacaattgcataccgtgcaaagattgatgatgcagagtcagcaggcaggataccacaaaacatatccttggaggtatgtgttgtccctctaggtctcactaaccatatccagaattagttaatgccttctccagatgatctctggaagaagctaacaaccttcaataaattcgtaattgtttatgttgtacttagtgataaggcatacttccattgatcactctgaaggtgtcatcccctggtgtggagagggttatccgcatccctgatgatcttgaacgcttcaaagaacgggccatgtatgtcaggtacaccattacaagcgacggcggagaagggatgacgcctcaggaaggcgatggagttttcaggctcatctcctacgacatggacctgtgcgagtgcacctggggtatagctgatgtgaagatcaacaggcagcaggccggcaagggaaggcccctgagcaagaagcagagggagtggcggctgcagacgccatttgagtcactgaagttggtcagggtgcattctgactgctgactgatcagatgcctcttttgagtaaatttttgtagccatctgttgtaattttgtatcataggtaaaaggtgctctgccattgtgtgtgtgcagtagctatatctgaaaaaacgtttgttatagcaagtgccaacacccaacagttacattcagtgatcgacgagatgagtttttctcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0438300, RefSeq:Os04g0438300