Os04g0438400

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Revision as of 11:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0438400| Description = Similar to Pectin methylesterase-like protein| Version = NM_001059398.1 GI:115458525 GeneID:4335918| Length = 1477 b...")
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Gene Name

Os04g0438400

Description

Similar to Pectin methylesterase-like protein

Version

NM_001059398.1 GI:115458525 GeneID:4335918

Length

1477 bp

Definition

Oryza sativa Japonica Group Os04g0438400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21817990..21819466

Sequence Coding Region

21817992..21819125

Expression

GEO Profiles:Os04g0438400

Genome Context

<gbrowseImage1> name=NC_008397:21817990..21819466 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21817990..21819466 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcctccgcctcgctccagtaccagtacgactgctcccacctcctctccctcccggccttcccctcccaccccatcacctcccgcttcctcgcttccctcgccccgccgcgacccggcgccgccgccaccaccaaaccctcctccgccaacgcctacgccgccgcctttccggcgaccctccgcgcgcacgccaccgtctgcaacgcaagcccatcagcgacgacgcagcggtccgattactccaccgtgcaagccgccattgacgcggcgccgaaccacaccgcggggcatttcgtcatcaaggtggctgcaggtatatacaaggagaatgtggtaattccgtatgagaagaccaacattttgctggtgggtgatgggattggtgctaccgtgatcactgcctcgcggagtgtggggattgatgggattggtacctatgaaactgcaactgttgccgtcatcggtgatggtttccgggcaaaggatataacattcgagaacggcgcgggtgcgggagctcatcaggcggtggcattccggtcagacagtgaccggtcggtgctggagaacgtcgagttccgcggccaccaggacacactgtatgctcgcacgatgcggcagctgtatcgccggtgccgtatcacggggacggtcgatttcatattcgggaattcagcggcggtgtttgaggaatgcgtgatcaagacggtgccacgggcagagggagctcgaaagagcgcgcgcaatgtggtggcggcaaatgggaggattgatccagggcagacaacggggtttgtgttctggaattgcacacttgatgggagcaaagagttcttagcgttgtttcgggcaaagccggagtcttatcggctgtatttggggcgcccatggaaggagtatgcaattacagtgtatgccggatgttatttggggaaggttgtcaggccagtgggatggcttccttggcgtggggaattcgcactcaggacgctatactatggggagtttgacagtcgagggcctggtgcaaatcacacggcaagggttgagtggagcagccaggcaccagaacaatttgtaggagtctactcagtagagaactttattcaggggcatgaatggattgcatactaa</cdnaseq>

Protein Sequence

<aaseq>ASASLQYQYDCSHLLSLPAFPSHPITSRFLASLAPPRPGAAATT KPSSANAYAAAFPATLRAHATVCNASPSATTQRSDYSTVQAAIDAAPNHTAGHFVIKV AAGIYKENVVIPYEKTNILLVGDGIGATVITASRSVGIDGIGTYETATVAVIGDGFRA KDITFENGAGAGAHQAVAFRSDSDRSVLENVEFRGHQDTLYARTMRQLYRRCRITGTV DFIFGNSAAVFEECVIKTVPRAEGARKSARNVVAANGRIDPGQTTGFVFWNCTLDGSK EFLALFRAKPESYRLYLGRPWKEYAITVYAGCYLGKVVRPVGWLPWRGEFALRTLYYG EFDSRGPGANHTARVEWSSQAPEQFVGVYSVENFIQGHEWIAY</aaseq>

Gene Sequence

<dnaseqindica>3..1136#tcgcctccgcctcgctccagtaccagtacgactgctcccacctcctctccctcccggccttcccctcccaccccatcacctcccgcttcctcgcttccctcgccccgccgcgacccggcgccgccgccaccaccaaaccctcctccgccaacgcctacgccgccgcctttccggcgaccctccgcgcgcacgccaccgtctgcaacgcaagcccatcagcgacgacgcagcggtccgattactccaccgtgcaagccgccattgacgcggcgccgaaccacaccgcggggcatttcgtcatcaaggtggctgcaggtatatacaaggagaatgtggtaattccgtatgagaagaccaacattttgctggtgggtgatgggattggtgctaccgtgatcactgcctcgcggagtgtggggattgatgggattggtacctatgaaactgcaactgttgccgtcatcggtgatggtttccgggcaaaggatataacattcgagaacggcgcgggtgcgggagctcatcaggcggtggcattccggtcagacagtgaccggtcggtgctggagaacgtcgagttccgcggccaccaggacacactgtatgctcgcacgatgcggcagctgtatcgccggtgccgtatcacggggacggtcgatttcatattcgggaattcagcggcggtgtttgaggaatgcgtgatcaagacggtgccacgggcagagggagctcgaaagagcgcgcgcaatgtggtggcggcaaatgggaggattgatccagggcagacaacggggtttgtgttctggaattgcacacttgatgggagcaaagagttcttagcgttgtttcgggcaaagccggagtcttatcggctgtatttggggcgcccatggaaggagtatgcaattacagtgtatgccggatgttatttggggaaggttgtcaggccagtgggatggcttccttggcgtggggaattcgcactcaggacgctatactatggggagtttgacagtcgagggcctggtgcaaatcacacggcaagggttgagtggagcagccaggcaccagaacaatttgtaggagtctactcagtagagaactttattcaggggcatgaatggattgcatactaactacaatgtgaagtgaaattattatatcagtgtttcttggtggcagttctacatcacaattttgaaaattatcttgagactacaagatgctccaaaggatctgatgccaactgtattgacacggtacataggccaactgatgtggtttcttttgtgtttagttgtaccttagttttgttttaatgtttggttgcgcttttgggctagtgtctggttacagattttgtaattgcgttaattcttttgtagaatacatatcaaaaaatggtttgctgcggaatattttacaagcttatttatgttttgctcctgcaatataattagtttgtggttgcctctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0438400, RefSeq:Os04g0438400