Os04g0444200

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0444200| Description = Similar to Calmodulin-binding protein 60-B (Fragment)| Version = NM_001059426.1 GI:115458581 GeneID:4335948| Length ...")
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Gene Name

Os04g0444200

Description

Similar to Calmodulin-binding protein 60-B (Fragment)

Version

NM_001059426.1 GI:115458581 GeneID:4335948

Length

5551 bp

Definition

Oryza sativa Japonica Group Os04g0444200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22249305..22254855

Sequence Coding Region

22249583..22249704,22250998..22251073,22251173..22251243,22251378..22251871,22251955..22252115
,22252205..22252408,22253168..22253402,22253872..22254467

Expression

GEO Profiles:Os04g0444200

Genome Context

<gbrowseImage1> name=NC_008397:22249305..22254855 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22249305..22254855 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagaggcaggggcggcacctggagcggtcggggtcgaagcgggcgctcgacgcgggcggcggcggcggggatgacgacgaccgtgcgcccaagcggccgcgcgtcccggccctcgcgagtgtcattgtagaagccctcaaagtagacagtttacaaaagctttgttcatcacttgagccgattctgcgaagagttgttagtgaagaagtagagcgtgctttagccaaattgggtccagctgcaactcctgctagaattcaaggaaggagctctcccaaaagaattgaaggtcctagtggtatcaatctccagcttcagtttaggtctaggctatcactaccactatttacaggaggaaaagtggaaggtgagcagggagcagcgatacatgttgtgctgctggatgcaaacactggacgtgtagtcacttcaggacccgagtcgtttgcaaaactggatgtccttgtgcttgagggtgattttaataaagagcaagatgaagattggactgaagaggaatttgagaaccatattgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctcaaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataagaagcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgttaaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaattgtacaagaaacactaccctcctgccctaaaggatgatgtttggagattggagaagattggaaaggatggtgcatttcacaagaagctaaactcaaatggaatatacacagttgaacattttcttcaacttcttgttagagatcaacagaagctaagaactattcttggcagtaacatgtcaaataagatgtgggaaagtcttgttgagcatgcgaagacatgtgttttgagtggcaaacactatatatattactcaagcgatgcaagaagtgttggagcaatattcaataacatatatgagttcactggtttgattgctgatgatcagtacatttcagctgaaaacctttctgaaaaccagaggttgtttgcggatacactagtgaaacaagcatatgatgactggatcaacgttgtcgaatatgatggcaaggaactgttgagattcaagcagaaaaagaaatctgtcacgacaagaagtgatacagcaaaggcttcaactagctacccttcttcatatggttcgacacactcacataaacaattgacaggcggacctgtgaatattgagcaatcatctatgagcagtatgagtgaagatggaactagaaacatgtccaacgggagccaagcagcaagatatgcagccaatcctcaggacatctcacaaagtatcaccatgccatatgacatgagttcattgagacccgaagaacagttcgctggttcttcaatccaaactcaagcttcaagaagctcaaacatgctagccttgggaccaacacagcagcaaaactttgaattctcagcacttggtcagtccatgcagccttctcccctcaatccttttgatgactggtcccggttgcaggagaaccgtggaggcgttgacgactacttgatggaggagatacgggtgaggagccacgagatactagagaacgaagaggacatgcaacaaatgctgcgcatcctgagcatgggtggatcatcagccaacatgaatcatggagatggattctcccccttcatgccgtctcctgcaccagccttcaactacgaggatgaccgggctcgcccgtctggtaaggctgttgttgggtggcttaagattaaggccgctatgcgatggggcatctttgtgaggaagaaagctgccgagagaagagctcagcttgtcgagctggaggactag</cdnaseq>

Protein Sequence

<aaseq>MQRQGRHLERSGSKRALDAGGGGGDDDDRAPKRPRVPALASVIV EALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAATPARIQGRSSPKRIEGPSGI NLQLQFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGRVVTSGPESFAKLDVLVLEG DFNKEQDEDWTEEEFENHIVKEREGKRPLLTGDLQVTLKEGVGTIGELIFTDNSSWIR SRKFRLGLRVSSGFCEGVRVKEAKTEAFTVKDHRGELYKKHYPPALKDDVWRLEKIGK DGAFHKKLNSNGIYTVEHFLQLLVRDQQKLRTILGSNMSNKMWESLVEHAKTCVLSGK HYIYYSSDARSVGAIFNNIYEFTGLIADDQYISAENLSENQRLFADTLVKQAYDDWIN VVEYDGKELLRFKQKKKSVTTRSDTAKASTSYPSSYGSTHSHKQLTGGPVNIEQSSMS SMSEDGTRNMSNGSQAARYAANPQDISQSITMPYDMSSLRPEEQFAGSSIQTQASRSS NMLALGPTQQQNFEFSALGQSMQPSPLNPFDDWSRLQENRGGVDDYLMEEIRVRSHEI LENEEDMQQMLRILSMGGSSANMNHGDGFSPFMPSPAPAFNYEDDRARPSGKAVVGWL KIKAAMRWGIFVRKKAAERRAQLVELED</aaseq>

Gene Sequence

<dnaseqindica>279..400#1694..1769#1869..1939#2074..2567#2651..2811#2901..3104#3864..4098#4568..5163#gctcgcgccccccaagtcgtcgcctagtcaccaccaccgcgagcgtctcctcctcctcctccacgcgccgcggcggcggatttcttcgccggcggctgcgagcgactcggtaccccgcgccgcgcgcgggcgctccttcgatcgtggtctgggcgagctggattgttgttgttttaatttaccccgctttgttttttttttgtttttgtttttaataattgatttgggtggtcgcagatctgggctgggaggagggaagtggggggtaaggcgaggcgatgcagaggcaggggcggcacctggagcggtcggggtcgaagcgggcgctcgacgcgggcggcggcggcggggatgacgacgaccgtgcgcccaagcggccgcgcgtcccggccctcgcgaggtgggtgcggggaaccctgatgtggtgtgggatggtttaatggtttcatttggctggcgggaggatttgcgggtgttagttcgggctactttactttgtatagtagcttagattcgctggaactttgatccctaacttggtttgactgtgagttagatatggtaactgcaatttatagtgtgaaggtgcaggtgtgctcagattttttgttcatgtggcattggttccggcctagcaaatatagtgaattagtagctgtgtagataatgtcaagtctgtatttgagtagtacttggatttgtaaatctgttcttatgctttcaaaaagttagaactaggcggtatatgttgagtgtcttagtttcatttggatggattagttcactggatttttcttccgcacaaaaattaagggtaggattgaagtgagagttcgttgctcaaaactgtagctctaaccacctttcctgcaaagataaaagaggaagctcgaacttggtgcctagtgagagtgtgggaccaaggctcctctcagattttctttaaccctttatgcgagtaatccatgttcctgttgtcgtttgttggcagtaccaccttgctagttttctcagatttttatttaagctaaccctcttctttaccaatagataagtgagaacaacttttggacagtcagattaaacgtaggaactgcttagtgcttacaaggatggtatgctcaaaattgtagtccatccacaattcatcagatagcttatgccttggtttagtctgttcaacagtgatatccatttcctgtatacttttcagtgtactgtcgtactaaaatctatactttttaagtgcactgtcatactatgggtatttcttattggaacctctagtttttctttgttgcaattaatgaggacttacattacttcgtttttttaggtaatgtagcaacaattcagcccttgttttccaaatgactacaggagattttatgtcatgatatgaggttctgaatgacggacacaattcctaatagacaattgtcaatcaactattgaatatccattttatagggctgtatgaaaaccatgtgaaacatacttcagttgatgcattttatcttgatcaccagttctataacaaaggcacacaatgacaaacctaagattttttttttcacatcatttatgttgggttgaatatgatacctttgggttactctgcatctttgacttttgttttaccatgttttaatacttctctgttagcttacttaagaaacttgtctctttgcagtgtcattgtagaagccctcaaagtagacagtttacaaaagctttgttcatcacttgagccgattctgcgaagagttgtgagttgaaaaatatccttttattatctgctgtggaacctttttatttacccatatggctgctttcatgattgatcgtcacccatatttgctatgtaggttagtgaagaagtagagcgtgctttagccaaattgggtccagctgcaactcctgctagaattcaaggaaggtacaggatagtggaacttgttcattatggttacgcctgtcaatgcatctaatgcaggaatacaaatacatgtttctatagtattatctggattttccacattaagttgaccttcatatcccaaataaaaacaggagctctcccaaaagaattgaaggtcctagtggtatcaatctccagcttcagtttaggtctaggctatcactaccactatttacaggaggaaaagtggaaggtgagcagggagcagcgatacatgttgtgctgctggatgcaaacactggacgtgtagtcacttcaggacccgagtcgtttgcaaaactggatgtccttgtgcttgagggtgattttaataaagagcaagatgaagattggactgaagaggaatttgagaaccatattgtgaaagaacgtgaagggaagagacctcttttaactggtgacctccaggtgactctcaaagaaggtgtagggacgattggagagcttatcttcactgacaattcaagctggataagaagcaggaaatttagacttggtttgcgagtctcttcaggattttgtgaaggtgtccgtgttaaggaggcgaaaacggaggcttttactgttaaagatcacagaggagaatgtatgattccatatactttactgatcttgtgtaactgttacatgtcttaacatatagatcttaaattataatccctcttgtagtgtacaagaaacactaccctcctgccctaaaggatgatgtttggagattggagaagattggaaaggatggtgcatttcacaagaagctaaactcaaatggaatatacacagttgaacattttcttcaacttcttgttagagatcaacagaagctaagaactgtaagtcttattattcctctttgtaacttatattaagaattttgtttctttaaaactaaaatttggttttcttcttctgatattttcagattcttggcagtaacatgtcaaataagatgtgggaaagtcttgttgagcatgcgaagacatgtgttttgagtggcaaacactatatatattactcaagcgatgcaagaagtgttggagcaatattcaataacatatatgagttcactggtttgattgctgatgatcagtacatttcagctgaaaacctttctgaaaaccagagggttagtatatttttaatgttcctttaaggattaacaatggaagttaaatatcctagcaccagttatcttgaattttatttgtctggtctcttttgcccattctgaaagtgttcgcttttcctgacaaacaaattcccatcatcactcttgattggaatgtctgctacagtgccatacttctttggcataggcagagtacgtaaaagcacccaagcagttctacacttattgtgttgaggtgctcattaccaataagctctgatgcttggaagcatttttttttcaagagcacaacaccaagatttgaatggtcataatatagttaaccacttcattatatccaaaaaaatatgcaccagttattgaaatatattcctagtactggttgacctgtagatgcttattttggccatttgcactatctgaacagagaatggtgatgattaaattgtcataattctatttcaagaaaaaaaactcaaagcttttcttaagatatatattgttcacaatcgtggtttgtatccattatgccactttgcccacattacataatcaaagtatagtgatctgagaatatctcaaattgttccgtgctacattgaaatctgagttttctcagctctgttacccctcttatcacctaagtcactgccagtctgccactataagatgtctacactaaattttactgatacttgttttgcgatggctgaaatacttaaccttttgtcattatctcattttactcaactgcagttgtttgcggatacactagtgaaacaagcatatgatgactggatcaacgttgtcgaatatgatggcaaggaactgttgagattcaagcagaaaaagaaatctgtcacgacaagaagtgatacagcaaaggcttcaactagctacccttcttcatatggttcgacacactcacataaacaattgacaggcggacctgtgaatattgagcaatcatctatgagcagtatgagtgaaggtatatgaatttcttttcttcaccttttttttagccattcttcctggccagtgattttctatctattaaaacaaaaatatcttccccttcttgtggcctgaactgcatgcttatgtttctattatctttacaggaatgctcatttgtgaatattgtatcttttggatttcattgatgtatttgatatacgtacaattttaattctacttagtcaaacaactaaaaacatttttaatatttctgtttgacttcatctgtgcaaattgttttaaagtagtcattttactaaattacatttaacttcatgtgcaaaagaagatctgttactgctgttgctttcatcaatttacttcccaagaatagcatatgatgttgcatttataagttcagttaacgattttattattcacctttctaagtaattcatagtaacttgcatatataaactattttgcttgttattatgcagatggaactagaaacatgtccaacgggagccaagcagcaagatatgcagccaatcctcaggacatctcacaaagtatcaccatgccatatgacatgagttcattgagacccgaagaacagttcgctggttcttcaatccaaactcaagcttcaagaagctcaaacatgctagccttgggaccaacacagcagcaaaactttgaattctcagcacttggtcagtccatgcagccttctcccctcaatccttttgatgactggtcccggttgcaggagaaccgtggaggcgttgacgactacttgatggaggagatacgggtgaggagccacgagatactagagaacgaagaggacatgcaacaaatgctgcgcatcctgagcatgggtggatcatcagccaacatgaatcatggagatggattctcccccttcatgccgtctcctgcaccagccttcaactacgaggatgaccgggctcgcccgtctggtaaggctgttgttgggtggcttaagattaaggccgctatgcgatggggcatctttgtgaggaagaaagctgccgagagaagagctcagcttgtcgagctggaggactagcctagcggaggtcgtccggagtgttcatcttatggaccatgaggcctggccagtctggacagatggtaacacgcctctcttggctggtcttgtacaatagtactgttgatatttatgtttactgatgaaagaaatgggctcagcgatgcaccaggccaggatggtccacatgacgagcttattagtatgaaatggacacccgttgtttgtatagctgtttgatggacattatgtaagttttgctagtccgccctgttgtattacatgcaatccttgatccgaactgtgcaaatttatttgttggaggttttgggaacacaagtgataggaggcatgtcgccatcctcttgtcctggaccaaaatggtagtcatagtatacattattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0444200, RefSeq:Os04g0444200