Os04g0444800

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0444800| Description = Ferric reductase-like transmembrane component family protein| Version = NM_001059431.1 GI:115458591 GeneID:4335953| ...")
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Gene Name

Os04g0444800

Description

Ferric reductase-like transmembrane component family protein

Version

NM_001059431.1 GI:115458591 GeneID:4335953

Length

4211 bp

Definition

Oryza sativa Japonica Group Os04g0444800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22282236..22286446

Sequence Coding Region

22282302..22282545,22282658..22282754,22283140..22283337,22283783..22284017,22284259..22284586
,22284674..22284944,22285045..22285300,22285384..22285840,22285972..22286162

Expression

GEO Profiles:Os04g0444800

Genome Context

<gbrowseImage1> name=NC_008397:22282236..22286446 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22282236..22286446 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccatccatgatggcgcaagaacggggggagccgctcctgcagagcggcaatggcgccgccggcgggggagccaaggggtggccgccgccggcgctggccaggaccgtgctcaaggtcctcatgtgggcggtgttcctcacctgggccgccgcgatcttcttctacccgaccaagcccgcgcaggcggcgttcgagggttggatggcggccaccaagcagtccctctttggcatcaccgggagtattttcctcgcattcagcgcgccgattctgatcgtcgcggctctggcgtacgtctacatctccgccttcccgagtgaccatatccatgtggagaagaacaagctgaagacactgtgtttccggctctggactttccctgttcttgtggacgggcctttcggggttgtctccgcggtagaattcatcggaatcgtcctgtttatcgtctatgttgtctattcaatgacctattacgctgtggagagcgtgagtctcatctcaaaatttggccagatttcgcttacttacagcgagttgctattgtacattattggcctccggttcggatcgatcgggttgttttgcatggctttcctgttcctccctgtctcaaggggttcagttcttctccggcttattgatattccatttgagcatgctactagataccacgtctggctcggccatctcacaatggctctcttcacattacatggcctatgctatgtgatcgcatggtctctcgaggggaatctacttggagaattggctgcatggaaagaaatcggagtggcaaacttacccggtgtgatcagcttggcagccggcctgctaatgtgggtgacatcactccacccagtgaggaagacatacttcgagctcttcttctacacccaccagctctacataatcttcgtcgtgttcctggcatttcacgttggcgacttcatcttcagcttctcggccggacccatcttcctcttcatgctcgatcgcttcctgaggttctggcaatgcagggccaaggtggacatcatctcggcctcatgccgcccttgcggaaccgtggaactagtcttctcaaagccagcaagtctccggtacaatgctctcagcttcatcttcgttcaggtgagggagctgtcgttcttggagtggcacccgttcagtgtgtcttcgagccccatggatggaagataccacatgtcgatcctgatcaaggtgcttggatcatggactgaaaaactgaggggcatcatcactgatgcccaggaacagggcaggaatggctctgagtcagagaccggccggatcaccgcctgcgtggaagggccttacgggcatgaatcgccataccacctgatgtacgagaatctcatcctggtggccggaggcatcggcatatcaccgttcctggcgatcctgagtgacataatccataggatcgaggaaggcaaaccatgcatgcccaagaatgtgctggtgctgtggtcggtgaagaagtccaacgagctctcgctcctttctgccgtcgacgcgcagttcatcagctcgtctgtctctgacaagctacatctcgacatccaggccttcgtgacccaagaatcccaacctccattggaagaaggcattgttggggatgaccagaaggcgaccggcatgttcgtcaagaacgggacgaccatgtccgggctggtcggcaccgggaacaacttctgggcgggcatgtacttcgccgcgtccacgctgggcttcgtcctggcgtacgcgctggcgcaggcgtactacgtgcggcgcctcaacgtgttcgcgtggtggcacctgggcctcgtgttcgtgctgtgcatggccgccggcgtcgcgctccccggcggcctcgtcgtcctcctgtggcacctgtccgagaagcggaaggcggaggacgacaggtgggacgccgccgccgccgccgtcccgcgcgcacaggacggcgaggaggaggccgagcagacaacgaacggcgccgacgcggccgacggcggcgtcagcctcgccgcggtgaagacgacgcggtacgggtgccggccacagttcgaagcggagttcgcggcgttcgcggagaaggccggcggcggcgcggcggacgtgggcgtgctggtgtgcgggccgccggggctgcaggcgagcgtggcgagggagtgcaggtcgcacaacctcggccgccgcggcgggaggcgccgccgcgccggcgccgtcttccatttcaacagccacagcttcgacctgtag</cdnaseq>

Protein Sequence

<aaseq>MTPSMMAQERGEPLLQSGNGAAGGGAKGWPPPALARTVLKVLMW AVFLTWAAAIFFYPTKPAQAAFEGWMAATKQSLFGITGSIFLAFSAPILIVAALAYVY ISAFPSDHIHVEKNKLKTLCFRLWTFPVLVDGPFGVVSAVEFIGIVLFIVYVVYSMTY YAVESVSLISKFGQISLTYSELLLYIIGLRFGSIGLFCMAFLFLPVSRGSVLLRLIDI PFEHATRYHVWLGHLTMALFTLHGLCYVIAWSLEGNLLGELAAWKEIGVANLPGVISL AAGLLMWVTSLHPVRKTYFELFFYTHQLYIIFVVFLAFHVGDFIFSFSAGPIFLFMLD RFLRFWQCRAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPF SVSSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITACVEGPYG HESPYHLMYENLILVAGGIGISPFLAILSDIIHRIEEGKPCMPKNVLVLWSVKKSNEL SLLSAVDAQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVGDDQKATGMFVKNGTTMS GLVGTGNNFWAGMYFAASTLGFVLAYALAQAYYVRRLNVFAWWHLGLVFVLCMAAGVA LPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPRAQDGEEEAEQTTNGADAADGGVSLAA VKTTRYGCRPQFEAEFAAFAEKAGGGAADVGVLVCGPPGLQASVARECRSHNLGRRGG RRRRAGAVFHFNSHSFDL</aaseq>

Gene Sequence

<dnaseqindica>67..310#423..519#905..1102#1548..1782#2024..2351#2439..2709#2810..3065#3149..3605#3737..3927#ggctggtcgaggggagggcgcgagtttccgtggattccgcggctctaccgttcacagccgctcgccatgacgccatccatgatggcgcaagaacggggggagccgctcctgcagagcggcaatggcgccgccggcgggggagccaaggggtggccgccgccggcgctggccaggaccgtgctcaaggtcctcatgtgggcggtgttcctcacctgggccgccgcgatcttcttctacccgaccaagcccgcgcaggcggcgttcgagggttggatggcggccaccaagcagtccctctttggcatcaccggtacagaattctcaagaaaatctccccaagttttccatcccctctctttccccaattttgcaatcaaaagcaagtgaaagaacctaaagctttttttttttggttcttgcagggagtattttcctcgcattcagcgcgccgattctgatcgtcgcggctctggcgtacgtctacatctccgccttcccgagtgaccatatccatgtggagtaagtctttctttaatcttctcgtgtgtatctgagaattctgtgggggaatctggtgttcctagtcaacttctattctgaattgtcggggatggagacggttagtcagtacaaaaatcactggggatggatctgtcgctgaacattcaggctgtttgttgatttaagcacacataattctgtgaatatttgctttatggataaaattatataattcagactgtaggtgagcctgtttgatatgaagaccatcacggttgattgaaatctaacctcgcaacagtcaaagttcagaaaatagcactgcatactttgtattcttatatatttgagagtgacctgattcatgcctacagctcactgttatttacctctttgatatcaggaagaacaagctgaagacactgtgtttccggctctggactttccctgttcttgtggacgggcctttcggggttgtctccgcggtagaattcatcggaatcgtcctgtttatcgtctatgttgtctattcaatgacctattacgctgtggagagcgtgagtctcatctcaaaatttggccagatttcgcttacttacaggtatgctgtaaataccgtatatgaagtactagtactatatcttttggggaaagagtagcctctgtgttagatagttagagcaaacggtgtgatgcactgaaactgaagaactatgtaatactgatgcatgcattgagtatatgagtgacaagagttgattattacatatatccttttcgtttcaatatgtaactaaaccctataggtgctgaagttttttttagaaaaaaaagagagaacaagatgctgaagtattgtgtagttgaatgtaaggcaagttgtgatgttcagaaaaatgttggtggatgaagacactactgcatacatgtacagtactgatttaaaatgtgcagtttgtgctactattgatgatattgctgaaaattgtactactaactcagatatgatctcaacacacttctaacattctgtatgctttttgcagcgagttgctattgtacattattggcctccggttcggatcgatcgggttgttttgcatggctttcctgttcctccctgtctcaaggggttcagttcttctccggcttattgatattccatttgagcatgctactagataccacgtctggctcggccatctcacaatggctctcttcacattacatggcctatgctatgtgatcgcatggtctctcgaggggaatctacttggagaagtaagaatgatttagaatcattcaggcaaatgatttgctatgaccaatgtcctgtgtgttagttactgtccatcttcttaagtaaataagcaacagataaatcacactactgaatacactgatatattaaaaaaaactgttaaacctgttgttacaacttacaagtgtcatctactctgttttggaggttagacatctggtgaaaactttctaatttttttcttcttgttgttattgttagttggctgcatggaaagaaatcggagtggcaaacttacccggtgtgatcagcttggcagccggcctgctaatgtgggtgacatcactccacccagtgaggaagacatacttcgagctcttcttctacacccaccagctctacataatcttcgtcgtgttcctggcatttcacgttggcgacttcatcttcagcttctcggccggacccatcttcctcttcatgctcgatcgcttcctgaggttctggcaatgcagggccaaggtggacatcatctcggcctcatgccgcccttgcggaaccgtggaactagtcttctcaaagccagcaagtaaagaacatgtcctgcattctgttgatcactgatccatcgatgttgccacagttggttgaacagatttgtgcctctgctctgcaggtctccggtacaatgctctcagcttcatcttcgttcaggtgagggagctgtcgttcttggagtggcacccgttcagtgtgtcttcgagccccatggatggaagataccacatgtcgatcctgatcaaggtgcttggatcatggactgaaaaactgaggggcatcatcactgatgcccaggaacagggcaggaatggctctgagtcagagaccggccggatcaccgcctgcgtggaagggccttacgggcatgaatcgccataccacctgatgtgagctttcagttaaatcgtaacattggtgatttggtgccgatggcaattgaattttggctcaagatttctgttttgtgttgtgcttgtatttgttcaggtacgagaatctcatcctggtggccggaggcatcggcatatcaccgttcctggcgatcctgagtgacataatccataggatcgaggaaggcaaaccatgcatgcccaagaatgtgctggtgctgtggtcggtgaagaagtccaacgagctctcgctcctttctgccgtcgacgcgcagttcatcagctcgtctgtctctgacaagctacatctcgacatccaggccttcgtgacccaagaatcccaacctccattggtaagagcatatagtagttcttgatcaatgcgtttgttccatgagatttgtggcaattggcatttggcaatttgtggttgcaggaagaaggcattgttggggatgaccagaaggcgaccggcatgttcgtcaagaacgggacgaccatgtccgggctggtcggcaccgggaacaacttctgggcgggcatgtacttcgccgcgtccacgctgggcttcgtcctggcgtacgcgctggcgcaggcgtactacgtgcggcgcctcaacgtgttcgcgtggtggcacctgggcctcgtgttcgtgctgtgcatggccgccggcgtcgcgctccccggcggcctcgtcgtcctcctgtggcacctgtccgagaagcggaaggcggaggacgacaggtgggacgccgccgccgccgccgtcccgcgcgcacaggacggcgaggaggaggccgagcagacaacgaacggcgccgacgcggccgacggcggcgtcagcctcgccgcggtgaagacgacgcggtacgggtgccggccacagttcgaaggtacgccaccacgcaccacaccacaccaatgccgcgacgcgaacgccggcgcgctgcgctgtgggcgaccgggccgcgacgtgcttaataaacctgacctgcggttgttttcgttttcgttttgcgttcagcggagttcgcggcgttcgcggagaaggccggcggcggcgcggcggacgtgggcgtgctggtgtgcgggccgccggggctgcaggcgagcgtggcgagggagtgcaggtcgcacaacctcggccgccgcggcgggaggcgccgccgcgccggcgccgtcttccatttcaacagccacagcttcgacctgtagtctgtagaccagagctagtacgacactctgcgcaggtggcgaacatattaatttttaattgataatagtagttaatatgtactgtataaaataactaaagattaaaattatagccgaggccctgcaccaatagtaaatccatccatccatcctgtttcctgtacagtacactacacatacgacaagctcgccgtcgtcggcgcgtgcatgtatatattctgcatgatcggaaacgtgagcatacgtgaaggcattacgaattcacatacgtcatatgaagtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0444800, RefSeq:Os04g0444800