Os04g0444900

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0444900| Description = Similar to Alfin-1| Version = NM_001059432.1 GI:115458593 GeneID:4335954| Length = 2778 bp| Definition = Oryza sati...")
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Gene Name

Os04g0444900

Description

Similar to Alfin-1

Version

NM_001059432.1 GI:115458593 GeneID:4335954

Length

2778 bp

Definition

Oryza sativa Japonica Group Os04g0444900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22288571..22291348

Sequence Coding Region

22288765..22288876,22289011..22289043,22289868..22290096,22290585..22290702,22290786..22291064

Expression

GEO Profiles:Os04g0444900

Genome Context

<gbrowseImage1> name=NC_008397:22288571..22291348 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22288571..22291348 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcggctacggctcggtcacaatcgtccacgacgcgcgctcccccgaggacgtcttccaggacttctgcggccgccgctccggcatcgtcaaggccctcaccatcgaggtggagaagttctacaagcagtgcgaccctgagaaggagaacttgtgcctctatggactgcctaatggaacctgggcagtgactctaccagctgatgaagttcctcctgaactaccagagccagccctcgggataaacttcgctcgtgatggaatgcaggaaaaagattggctgtccctgatagctgtccatagtgattcatggttactgtctgtggcattttactttggggctcgttttggatttgataaaaaggccagggaacggctcttcatgatgaccagtagtctccccactgtctttgaagttgtgtcaggaggtgtgaatacacaatcaaaaaccgccaacggcagtagcaaaaacaagtcaggctctaagccaccaaagcggcccaattctgacagcaagccacagaagcaggtccaggcaaagtatgaggaagagaacggcggcagaggaaatggaggtgatgaagatcaagctgaaaccatttgtggcgcctgtggtgaggcctacgcaaacggcgagttctggatttgctgtgacatttgtgagacctggttccatggcaaatgtgtccgaatcacccctgccaaggcggagcacatcaagcattacaagtgtcctggctgcagcaacaagaggaccagagaatga</cdnaseq>

Protein Sequence

<aaseq>MDGGYGSVTIVHDARSPEDVFQDFCGRRSGIVKALTIEVEKFYK QCDPEKENLCLYGLPNGTWAVTLPADEVPPELPEPALGINFARDGMQEKDWLSLIAVH SDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSGGVNTQSKTANGSSKNK SGSKPPKRPNSDSKPQKQVQAKYEEENGGRGNGGDEDQAETICGACGEAYANGEFWIC CDICETWFHGKCVRITPAKAEHIKHYKCPGCSNKRTRE</aaseq>

Gene Sequence

<dnaseqindica>195..306#441..473#1298..1526#2015..2132#2216..2494#aacctccgcttctaatctctctcctcctctccgcggcgccactctccttccgccgccgccgccgacgacgacgacgacctcctcctccgggtcgacgaaaccctagccgcggcgcggaggcctgctgcttccggctcccgctcctccctgccgagttcccgcgaacccttcgctgccggtgaaggaaggcgaggatggacggcggctacggctcggtcacaatcgtccacgacgcgcgctcccccgaggacgtcttccaggacttctgcggccgccgctccggcatcgtcaaggccctcaccatcggtacatctccgtttctctctctcgctatcgatcaatctatctaatgtgtctctggattcgtttggtgtggggttcgtcgctgatgactgatgatttgtttttgtttttttttttgtggtttcgttgttgcacagaggtggagaagttctacaagcagtgcgaccctggtgagtctcctccgttgcttctaatgttgatttttatctgtttagtacagcgagacggtatttgattgctctcgcggtgattccatgtagttgctagccatccaatatttttacagtattggttgatcagattagaggcgacattagtaaattgttgatgtaaagctccttatgccttgtccggaattaaaaaaaaaatctacctattagatcaattcacgtcatgagattgaaaagctggaagagatgcatgttaggtgacttataggatgcaacagaagtgcaggaagcaaattggacttgtgcttatgtttatgtttgacctcgctgcgatctatagaaaatgtagtggctggtgacaaggtgtggtgaaagagattgaggtctggagcattagtcaatagttggggattaggagctgcacaggatcctgtttgccttgaattgctgccctgggatttgtggcaaagtgcatatagtaatgttgtgctccttgtcagcatccactttttagtgcttgttggttctatttaattaatgcttagttggaaaaagaaaggaaccttcaaatcctactttgtgcattgtatgtgttagagcaagtccttgatcttgctgagtaagccagattgtccttttctatagtaaccatagggcttgggtgtggacccagggcccaggcttggattgggactgggactaaaagcccatgggcctcaatcaattttcaccatacttttattatgcgacaaaacagggcggggcggcagggatggttccacccctgatagtgctgatataaacatgttcctttattttgccagagaaggagaacttgtgcctctatggactgcctaatggaacctgggcagtgactctaccagctgatgaagttcctcctgaactaccagagccagccctcgggataaacttcgctcgtgatggaatgcaggaaaaagattggctgtccctgatagctgtccatagtgattcatggttactgtctgtggcattttactttggggctcgttttggatttgataaaaaggccaggtttgcttctaattcatttttttccctgttgatttgcatcaccttttctcaaactggtcattttaattctatctgttctatcactttactaaagaattcccacgttgctctatactatgtgcaaggatgcgtgtacttatatgctgattccagtgtcatggtagacttgtgagtctaggttgttttactgacacctgccatgatttaaatctgataattgatcatttattaatgatttgctctgttagctatcttaattctcacaaaacccatatttttcacaatagactcactgtttcatgcatttatatgaacagccagtacgaccttctgtccacaccttctaaacaaaacttgctttatggtttgtccttttttacacagcaacatagataggagaatccaaggttcttttagttctctaaaatatgtcagctgtgttaaggaacttgatgatgttgttaagaggcatttgaatatggatgcagggaacggctcttcatgatgaccagtagtctccccactgtctttgaagttgtgtcaggaggtgtgaatacacaatcaaaaaccgccaacggcagtagcaaaaacaagtcaggctctaaggtaacatatgtctaacatttcatggcttcttgcccgcacgctaaaacatgctttctgattattcattgtcctttctatttcagccaccaaagcggcccaattctgacagcaagccacagaagcaggtccaggcaaagtatgaggaagagaacggcggcagaggaaatggaggtgatgaagatcaagctgaaaccatttgtggcgcctgtggtgaggcctacgcaaacggcgagttctggatttgctgtgacatttgtgagacctggttccatggcaaatgtgtccgaatcacccctgccaaggcggagcacatcaagcattacaagtgtcctggctgcagcaacaagaggaccagagaatgagcgtccattttttctttctaatgtgatcctgatagtagtggcaaaaaatagatagtagtttacccgtgaacttggggaacctcaattcctactgggtgaccgtcgttgcggcagccctggttgccccgctgtattagtagtagctacgttacttcttgtatcatactggacatagttggtagtgccacagtaatagtagtatcaataggccatcttctgcctccttggttggatggattggttaagtgtctaaactctctgattaatgatgtgattttttagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0444900, RefSeq:Os04g0444900