Os04g0445700

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0445700| Description = Similar to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthas...")
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Gene Name

Os04g0445700

Description

Similar to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I)

Version

NM_001059439.1 GI:115458607 GeneID:4335962

Length

4310 bp

Definition

Oryza sativa Japonica Group Os04g0445700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22316512..22320821

Sequence Coding Region

22316745..22316812,22317108..22317174,22317360..22317461,22317570..22317683,22318032..22318205
,22318711..22319142,22320204..22320510,22320571..22320635

Expression

GEO Profiles:Os04g0445700

Genome Context

<gbrowseImage1> name=NC_008397:22316512..22320821 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22316512..22320821 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcgcacgcccacacgctcgggctccgcatctccccgccgccgcctgcgccgccgcggcgggagacggacccgaggaagcgggtggtgatcacggggatggggctggtgtccgtgttcgggaacgaggtggacgccttctacgagcggctgctcgccggggagagcggggtcggcgccatcgaccgcttcgacgccggcggcttccccacgaggttcgccggccagatacgcgggttctcctcggaggggtacatcgacggcaagaacgaccggaggctcgacgactgcctccgctactgcatcgtcagcggcaagaaggcgctcgagaacgccggcctcggcaagggctccgatggccacaccaagcttgacaaagtccgggctggtgttcttgtgggaactggcatgggtggcctcactgtgttttccgatggtgttcaaaaccttattgagaagggatacaagaaaatttcgcctttctttatcccatacgctataactaacatgggctcggcattgctagcaatggatgctggttttatgggtccaaactactcaatttcaacagcttgtgcgacctccaactactgcttctatgctgctgccaaccatatacgtcggggtgaggctgatgttatcgttgctggtggtactgaagctgcaattattccaattggccttggaggttttgtggcctgtagagcactatcgcagaggaacgatgacccagaaactgcatctaggccatgggacaaagagcgagatggttttgttatgggcgaaggtgctggtgtactggtcatggagagcctggagcatgcgatgaagcgggatgcaccaataattgctgaatatttgggaggtgcagtaaactgtgatgcttaccatatgactgatcctaggtcagatggactgggtgtatcgtcctgtattactcagagccttgaagatgcaggtgttgcgccagaggaggtaaattacatcaatgcacatgcaacttcaactcttgctggtgacttggctgaagtaagagccattaagcaagtcttcaagaatccatctgatattaaaatcaattcaacgaagtctatgataggccattgcctaggtgccgctggtgggttagaagctattgccgttgtcaaagccataactactggatgggtgcatcctactattaaccaatttaaccccgagcctgaagttgattttgatacagtagccaacgagaagcagcagcacgaagtgaatgttgctatctctaattcatttggatttggaggtcacaattcagtggtagtatttgcgccattcaagccatga</cdnaseq>

Protein Sequence

<aaseq>MQAHAHTLGLRISPPPPAPPRRETDPRKRVVITGMGLVSVFGNE VDAFYERLLAGESGVGAIDRFDAGGFPTRFAGQIRGFSSEGYIDGKNDRRLDDCLRYC IVSGKKALENAGLGKGSDGHTKLDKVRAGVLVGTGMGGLTVFSDGVQNLIEKGYKKIS PFFIPYAITNMGSALLAMDAGFMGPNYSISTACATSNYCFYAAANHIRRGEADVIVAG GTEAAIIPIGLGGFVACRALSQRNDDPETASRPWDKERDGFVMGEGAGVLVMESLEHA MKRDAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCITQSLEDAGVAPEEVNYINAHA TSTLAGDLAEVRAIKQVFKNPSDIKINSTKSMIGHCLGAAGGLEAIAVVKAITTGWVH PTINQFNPEPEVDFDTVANEKQQHEVNVAISNSFGFGGHNSVVVFAPFKP</aaseq>

Gene Sequence

<dnaseqindica>4010..4077#3648..3714#3361..3462#3139..3252#2617..2790#1680..2111#312..618#187..251#gtacacacccacgaaggtgaggggccccatccaatccacacgaaatccatccccccgccgcgcgcgccaccgccaccgccaccgccaccctcgccgcggcgccgcctccactccactccaccgccgccgcctatataacccacctccacctcgcttccccggcctcgactccactgctccaccaccatgcaggcgcacgcccacacgctcgggctccgcatctccccgccgccgcctgcgccgccgcggcgccgcgctcgcccgcgccggcgcgcagtccgtgtcgccgcggcggcgtcggcgccgcggcgggagacggacccgaggaagcgggtggtgatcacggggatggggctggtgtccgtgttcgggaacgaggtggacgccttctacgagcggctgctcgccggggagagcggggtcggcgccatcgaccgcttcgacgccggcggcttccccacgaggttcgccggccagatacgcgggttctcctcggaggggtacatcgacggcaagaacgaccggaggctcgacgactgcctccgctactgcatcgtcagcggcaagaaggcgctcgagaacgccggcctcggcaagggctccgatggccacaccaaggtcagtgagagactgagacgttctcgttggtgtttatctctgtaaaattcactttccttttttgtgtgcaatgtatgacagtatgtcaaaagtgctcacttgtaccattcacttcgagaaacgattgaatttgcataaatacatcaggaatggatttatttaggaatattttggtatgataggaagtaagccagctagaaagaaatggccatccatgcttttatgaaagaaaaagagggagctaggaatagacaccaactgtgtaccaaactaataattgatttttgttcaatttttttttaaatgtacatatgggttgaaaattttgcacataatttatatatccaatcataccaggtactctctccatcccataaaaaaccaacctaataccggatgtgatacatcctagtattacgaatctggacatccctccgtccctaaaaagctaacctagtagacacatccggtactaggttggttttttatgggatggaggaagtaagaataagcacattattttattattgtgatattgtcacagtgtgttaagaacaaactgagttaaattcggttagttttcttgtatggagattggctccaaagaaaaacaagaggtattgatttgatttggttttgctgtaagttcctgtaacctatgatgtcatagaaatgaccttttgttatgtgagtccgatttccttatgagctgctagatcactgcggatgaatagcctcaaaaaagaaactccattcatgtggtcttattggtagacctcataggctagttgtttaagagtttcccggaactgtcaaaaggactgctaactcaaacaacagagtaacagaccattagtttgtctgaggaatatgatggctaagcatgttatatgatcttgctgtcttgtttttaatgggtagaacgaccagtttgttatttgttgcagcatattctgcttttcatcattaattcattatgcatccagttgcacaattttctcctgttccttgcttgtcctcttttggaagtcttaatcctctaattgcttcattttcaacagcttgacaaagtccgggctggtgttcttgtgggaactggcatgggtggcctcactgtgttttccgatggtgttcaaaaccttattgagaagggatacaagaaaatttcgcctttctttatcccatacgctataactaacatgggctcggcattgctagcaatggatgctggttttatgggtccaaactactcaatttcaacagcttgtgcgacctccaactactgcttctatgctgctgccaaccatatacgtcggggtgaggctgatgttatcgttgctggtggtactgaagctgcaattattccaattggccttggaggttttgtggcctgtagagcactatcgcagaggaacgatgacccagaaactgcatctaggccatgggacaaagagcgagatggttttgttatgggcgaaggtgctggtgtactggtatgcattattgttgatataactatgctaattccatactccctccttccaaaaatctgagacctattttttttgcatcaaaaccaagaagcaattaactcactcaccaagtcaccatgtggcaaaaccaatgaacatgcaaccaataagtaatagaatagcttcttggtttccgatcaacaatttaatttagcacatagtgactacaaatatgactcagatttttagagaaaccaaagaatgaaataggtctcggatttttggaaggagggagtactttataactgtgaaacatgtagcagcacgattgctgtttatacccattaatttgttaatttcgattccatcattacagttttttgctcataaagtgcttcgcgtcaagttatcatgctaatccccattttagacatcagctatcatactgataaagagtttctagttggtcacataaacagcttagtctctcgtgacatgctaaatcactgatggtctggttgaataggtcatggagagcctggagcatgcgatgaagcgggatgcaccaataattgctgaatatttgggaggtgcagtaaactgtgatgcttaccatatgactgatcctaggtcagatggactgggtgtatcgtcctgtattactcagagccttgaagatgcaggtgttgcgccagaggaggtaactctataaaacataggctcccacagctttagttcaaaggtcctcaaagttgattacagtctaaaatcaaaacattggctgaattgaagaatgaaccaaatctcttactgaattatgggtggcccctttgatgcagtttttgttgtgtttaatctttgatgcagttgttgaaactgtttagaagtgcgtccatttggaaaacctattaatatttcatttatatttattgctctaactttatgttctttagggactgagttgactgtaatgctaatctctaaagttcttgttctattcttgatggaaataaacaatttttacagttaaattccactgctcttttaggtaaattacatcaatgcacatgcaacttcaactcttgctggtgacttggctgaagtaagagccattaagcaagtcttcaagaatccatctgatattaaaatcaattcaacgaaggtttgcacattttcatctacaacatggcattccataaattcttttgaatggaaagtgccaatttgtagttgtcttcctcttatggcttgtttcttccttctctgccagtctatgataggccattgcctaggtgccgctggtgggttagaagctattgccgttgtcaaagccataactactggatgggtgcatcctactattaaccaatttgtaagtaatcattatcctctctgaatgttatttgctttctgatggttcatgcaaattattgtcagatttagcaatccatgtttttcacaagttgtctgtgcaacagtcaagaataatagggttcacttaattgattcattgtcaaattgtcagcatatcaatttttagtctcgctccttttgcagaaccccgagcctgaagttgattttgatacagtagccaacgagaagcagcagcacgaagtgaatgttggtgagtctctgtatccctgcacaaatcaacgccagaaaagcttgccctagccggctagcccccttatcttcgtttcatctgctatatagtcagttggggtagggcattgacactcttatggtttccattccatgaaaaattgatacttcaagggtcggcctgagagggcaaaaaattgatttccttgttgattgtttcattgaattgcatgcatgaacttatgtgcagacagctcattttcccctgtcttttctggcaatctgtcttatgaatgtttgctgtcttctcaatgcagctatctctaattcatttggatttggaggtcacaattcagtggtagtatttgcgccattcaagccatgattccaattttttgcttcagaaaatatatagcctgcagcattttctggcagttggtaattagtgaggaattgctagatgtagcatatttgattttaccggcctccatcttcaagggagaaattttgatttgagtgtaaccggattatgatcattagatgccaattcttttcgggttcccgttgtgtatgttatggtgtgacagatctgaaatagtgtaaagacatcagtgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0445700, RefSeq:Os04g0445700