Os04g0446300

From RiceWiki
Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0446300| Description = Microsomal signal peptidase 25 kDa subunit family protein| Version = NM_001059444.1 GI:115458617 GeneID:4335967| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0446300

Description

Microsomal signal peptidase 25 kDa subunit family protein

Version

NM_001059444.1 GI:115458617 GeneID:4335967

Length

3045 bp

Definition

Oryza sativa Japonica Group Os04g0446300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22346200..22349244

Sequence Coding Region

22346619..22346712,22347386..22347528,22348530..22348607,22348764..22348919,22349054..22349161

Expression

GEO Profiles:Os04g0446300

Genome Context

<gbrowseImage1> name=NC_008397:22346200..22349244 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22346200..22349244 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcgacggcgcggcggccacgccggcgaaggcgagcccgaagaaggccaacctcctcgacccccactccatcaagcacctcctcgacgagaccatctccgacgtcgtgaagagcaagggctacgcggaggacacgcggctgggcaactggaagctggcgattggggcggccgtgatcgccatcgctctcctcgcgcagttctacccgaagaagttcccccagaaccgcgagttcctcctcggctgcatcgcattatatgtggtgttgaatgtggtgctgttgatacttagctataccaaggaaaaggatgccattatgttcacacaccctcctgcgggttctttcaatagcactggactagttatatcttcaaaattaccaagattctcggatatgtacactatcacaatagccagtgcagatccccagtctatttccgccaataagccagttcatttcactaagagtgttacaaaatggtttactaaggaaggagttctcgtggaaggcctgttctggaaggatgttgagaggttgattgatgactacaacactgagcgcaagggcaaatga</cdnaseq>

Protein Sequence

<aaseq>MASDGAAATPAKASPKKANLLDPHSIKHLLDETISDVVKSKGYA EDTRLGNWKLAIGAAVIAIALLAQFYPKKFPQNREFLLGCIALYVVLNVVLLILSYTK EKDAIMFTHPPAGSFNSTGLVISSKLPRFSDMYTITIASADPQSISANKPVHFTKSVT KWFTKEGVLVEGLFWKDVERLIDDYNTERKGK</aaseq>

Gene Sequence

<dnaseqindica>2533..2626#1717..1859#638..715#326..481#84..191#acaggccactgagcccgcatcgtctcgtctccctctccctctcccaccccgcctccctcctcgacgagctccgagcggcggcgatggcgagcgacggcgcggcggccacgccggcgaaggcgagcccgaagaaggccaacctcctcgacccccactccatcaagcacctcctcgacgagaccatctccgacgtacgagcgacacgcgctaaaaccctagcctcccccccctctccattctctctcccctcccctctcgatctcctccggttgggtttgatagattttggccgctgatgaggaggtggtttttgttgtgcgatcaggtcgtgaagagcaagggctacgcggaggacacgcggctgggcaactggaagctggcgattggggcggccgtgatcgccatcgctctcctcgcgcagttctacccgaagaagttcccccagaaccgcgagttcctcctcggctgcatcgcattatatccttgattttgtgattccgctctgtttcggatgaaactggatttagatctgcttttggggtgttgtcagttagctggaatttggttttgattggtagttattgtgaaacctgttgtttgtttctgttgatccttgacttgatcggtcgatacatatgtggtgttgaatgtggtgctgttgatacttagctataccaaggaaaaggatgccattatgttcacacaccctcctgcggtgagttatcatctggatttgatgctctttaattcaaagtgcatatcaatgacacactttatcttactgtagcgcatctattataaatggttgggggttgggcaaaattagccaattaggaagtagatctcgcatcaacatatatgaaaattgagcagtataagatgcctatcatagtactccctccatttacttttgatagtcatatttcatcttggcacactgaccaatggtaagtaattttacttatcatccatttaaacaagctactagttattcctcgtaaacaagtgattcattaatatttacatttctcgatgcccatgtagccaatcttttgtgaaagaatggagagtcacacattaaatccgagaaagtcattaagaggatatgtggttggattgaaatatgcctatcaaaagtaaatttttcagatttgaaaatatgcctatcaaaagtagatagagggggtatcatatataggtcttgaaaattctgagtttctgactgaagagtttgatgacccatatcatactatatcttgtcattgcagccccataaactaatatggtacagactggtagttttcatttttcaagttctggtttgtttcatattctcatgttatggacatctcattgcaaattagatgttatactacttagtacaaatatgttttatctattacttttcctctcaggtagcaactttgtagttgtgcaggttatgttacagctagtgtcgtcagttacatcttaccagcaatgaagctaccagattatgaacaactattttgcttctaaaccatgaacacactgacagatgtgcctggctattcagttacttttagtaatagtgctttgtttagacacttacttcatcttgtcttgcactctacataatgtgattaggagatgtttttacgatttttcttgtttggtacatgtgtcgccataatgtttacagcattatttaacctgttgtatttttctttgttccagggttctttcaatagcactggactagttatatcttcaaaattaccaagattctcggatatgtacactatcacaatagccagtgcagatccccagtctatttccgccaataagccagttcatttcactaagagtgttacaaaatggtatgtatttattagaacttctcaattcagtgagttaaatgaagtcatcaagaaacatatttcttctttaatcttagtgaaggcacactcttctagttagctacagttgcatggtttaaacctattgttctcttaaaggagagaattctaaatttgattgcaatgctcgttatacggtcatgtgctctaaaaatgcgtttgccaaggctgcaccttccggtgtaggccaccttcccagtgtatccgatctaggtgtctgcctggctctgctaggttcgccttatgctcttatcactgatatgtgctagctgctagtctgctgcctaactagccatagcgccttggtgaacactctctgctaatgctcactcgattgatgcttccattgtgctgttaggattacaccattacatgaagatagctagtgcatgacggctccaaacatgcttcctgtattaaggccatgttcgacaccacctagtttgcagatactactagttgcacattgcaaatcattagcgtcaacattttaggcattattcaatggcataaagagaaaggtgcaagcttgagcatgatctaacctgtcagcgcaaagttctaattcacctggaaacttaaaggcatcctttcagtgttacccttcttttgcagtaacagtattcctgtgcaggtttactaaggaaggagttctcgtggaaggcctgttctggaaggatgttgagaggttgattgatgactacaacactgagcgcaagggcaaatgaatgggtagtccatgtgactatgagacgttaattgtctagaaaagaaaccctcttgtggaattccttgcttggaagaatccttagcttaatcaaaatagacaattttgtcatacattactgtttcactggtgattgaaatactgtcgaagacacccggtaccatcccaattcttttttatgagcttacaagcctatcgatggttaatcatagataccagcactgagctctgtacgttctgcttatatgacaacatgaatgaaattgcctcaggaaaacagaaaaatgtattatgccaatagccaaaaatccttgtaaataattccttctgtacacatattttggactggtaaggtaccaacaactaccagtgtcgtcgaaatacgtactctcctcgtcccaaaatataagcatttttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0446300, RefSeq:Os04g0446300