Os04g0447400

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0447400| Description = Similar to Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Version = NM_001059450.1 GI:115458629 GeneID:4335973| Le...")
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Gene Name

Os04g0447400

Description

Similar to Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)

Version

NM_001059450.1 GI:115458629 GeneID:4335973

Length

2355 bp

Definition

Oryza sativa Japonica Group Os04g0447400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22712607..22714961

Sequence Coding Region

22712954..22713397,22713578..22713630,22713715..22713968,22714065..22714480,22714559..22714846

Expression

GEO Profiles:Os04g0447400

Genome Context

<gbrowseImage1> name=NC_008397:22712607..22714961 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22712607..22714961 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgtcgacggcgcagacaggggagtcgatgcactcctcgacgttcgcgtcgcggtacgtgcgcacggcgctgccgaggttcaggatgccggagaagtcgatccccaaggacgcggcgtaccagatcatcaacgacgagctgatgctcgacggcaacccgcgcctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatgatggccgccatcaacaagaactacgtcgacatggatgagtaccccgtcaccaccgagctccagaaccggtgcgtgaacatgatcgcgcatctgttcaacgcgccgatcggggacgacgagacggcggtcggggtgggcacggtggggtcgtcggaggccatcatgctggcggggctggcgttcaagaggaagtggcagaacaggatgaaggccgaggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgacccaagggtactacgtgatgaacccggagaaggccgtggagatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaacggcgagttcgaggacgtcaagatgctcaacgacctcctcaccgccaagaacgccgagacagggtggaacacgccgatccatgtggacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgatgagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaaggatcgaaccagataattgcgcagtattaccagctcattcgtctcggattcgaggggtacaaggacatcatgcagaactgccgggacaacgcgacggtgctccgggaggggatcgagaagacgggccacttcgacgtggtgtccaaggactccggcgtgccgctggtggccttctccctcaaggactcgtcgcggtacacggtgttcgaggtggccgagagcctccgccgcttcggctggatcgtgccggcgtacaccatgcccgccgacgctgagcacgtcgccgtgatgcgcgtcgtcatccgcgaggacttcagccgcggcctcgccgagcgcctcatcaccgacctcaccaagacggtggccgatatggacgcccacgccgtcaagaaggccgccgccgagccggccaagaagaccgtgcgggagatagagaaggaggtgaccacctactggcggagtttcgtcgccaggaagaagagcagcctcgtctgctga</cdnaseq>

Protein Sequence

<aaseq>MALSTAQTGESMHSSTFASRYVRTALPRFRMPEKSIPKDAAYQI INDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNM IAHLFNAPIGDDETAVGVGTVGSSEAIMLAGLAFKRKWQNRMKAEGKPHDKPNIVTGA NVQVCWEKFARYFEVELKEVKLTQGYYVMNPEKAVEMVDENTICVAAILGSTLNGEFE DVKMLNDLLTAKNAETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHK YGLVYAGVGWVIWRNKEDLPDELIFHINYLGADQPTFTLNFSKGSNQIIAQYYQLIRL GFEGYKDIMQNCRDNATVLREGIEKTGHFDVVSKDSGVPLVAFSLKDSSRYTVFEVAE SLRRFGWIVPAYTMPADAEHVAVMRVVIREDFSRGLAERLITDLTKTVADMDAHAVKK AAAEPAKKTVREIEKEVTTYWRSFVARKKSSLVC</aaseq>

Gene Sequence

<dnaseqindica>1565..2008#1332..1384#994..1247#482..897#116..403#cgcgtcgtcgtcccctctcctagctagcggctatcaaacccccacaccactgctcgatcgatcgtcgcagccggagtaactaaggcagagatcagatcaggcgaattaggagcatatggcgctgtcgacggcgcagacaggggagtcgatgcactcctcgacgttcgcgtcgcggtacgtgcgcacggcgctgccgaggttcaggatgccggagaagtcgatccccaaggacgcggcgtaccagatcatcaacgacgagctgatgctcgacggcaacccgcgcctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatgatggccgccatcaacaagaactacgtcgacatggatgagtaccccgtcaccaccgagctccaggtaaacaaccaccacgacaacaacaaacacctctgcatctgcacaacgcatcatgtctaacacggatccgatgaacagaaccggtgcgtgaacatgatcgcgcatctgttcaacgcgccgatcggggacgacgagacggcggtcggggtgggcacggtggggtcgtcggaggccatcatgctggcggggctggcgttcaagaggaagtggcagaacaggatgaaggccgaggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgacccaagggtactacgtgatgaacccggagaaggccgtggagatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaacggcgagttcgaggacgtcaagatgctcaacgacctcctcaccgccaagaacgccgagacagggtaagacacctcgccgatctctgcattcactgcacgaaaatgccaaaattaactcaagaagtcaagatcattgatcgatctgagaatgcatgacaggtggaacacgccgatccatgtggacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgatgagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaaggtgcatgcccgttttgcatacgtgattacctttggataattgcacatccagtaatctgatttttctaccctgttctgataataggatcgaaccagataattgcgcagtattaccagctcattcgtctcggattcgaggtaatataactactctttttttgcaactacacggaatcatgtgtgttgattgcatcagcgagaaaccctggatgtttggattcaagttcatgcattccgaatggttgcatcgtttgttgggatcctgtcggctgtacctatttgatcatgcgaaaccgaatgttgctgttcgtgatgcaggggtacaaggacatcatgcagaactgccgggacaacgcgacggtgctccgggaggggatcgagaagacgggccacttcgacgtggtgtccaaggactccggcgtgccgctggtggccttctccctcaaggactcgtcgcggtacacggtgttcgaggtggccgagagcctccgccgcttcggctggatcgtgccggcgtacaccatgcccgccgacgctgagcacgtcgccgtgatgcgcgtcgtcatccgcgaggacttcagccgcggcctcgccgagcgcctcatcaccgacctcaccaagacggtggccgatatggacgcccacgccgtcaagaaggccgccgccgagccggccaagaagaccgtgcgggagatagagaaggaggtgaccacctactggcggagtttcgtcgccaggaagaagagcagcctcgtctgctgatcatcgactcctgcactcgcgcgtacataaagtgcaggaacgaataattcttgacccgtcttgcattgagttcttcgtttgctgctgcttcttttctttttttttttccttttcacccgctgaattttgagttcagtttcaaattcgcttcgatagatttgtgtatgtcacaccgatttgtggcattcttgcagacaagttaccaatatgaaatgcgtataggcatgtacacgcagagacgtgtcaggcagaacagaagtgagatgcaccgatctgtaccggccatggcatggaattggtttgtcatgggctatagttggttgacagaataagttcattttgtgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0447400, RefSeq:Os04g0447400