Os04g0447800

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0447800| Description = Glutamate decarboxylase (EC 4.1.1.15)| Version = NM_001059454.1 GI:115458637 GeneID:4335977| Length = 2163 bp| Defi...")
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Gene Name

Os04g0447800

Description

Glutamate decarboxylase (EC 4.1.1.15)

Version

NM_001059454.1 GI:115458637 GeneID:4335977

Length

2163 bp

Definition

Oryza sativa Japonica Group Os04g0447800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22728745..22730907

Sequence Coding Region

22728810..22729103,22729208..22729878,22729970..22730024,22730230..22730712

Expression

GEO Profiles:Os04g0447800

Genome Context

<gbrowseImage1> name=NC_008397:22728745..22730907 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22728745..22730907 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttctgacgcacgtcgaggcggtggaggagggcagcgaggcggcggccgccgtgttcgcgtcgaggtacgtgcaggacccggtgccgaggtacgagctcggcgagaggtcgatatccaaggacgccgcgtaccagatcgtccacgacgagctcctcctggacagcagcccgcgcctgaacctggcgtccttcgtcaccacctggatggagcccgagtgcgacaggctcatcctcgaggccatcaacaagaactacgccgacatggacgagtaccccgtcaccaccgagctccagaaccggtgcgtgaacatcatagcgaggctgttcaatgcgccggtgggcgacggcgagaaggcggtcggggtgggcacggtggggtcgtcggaggccataatgctggccgggctggcgttcaagcggcggtggcagaaccggcggaaggcggcggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgaccgaaggctgctacgtgatggaccccgtcaaggccgtggacatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaccggcgagttcgaggacgtcaggcgcctcaacgacctcctcgccgccaagaacaagcggacgggttgggacacgccgatccacgtcgacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgaggagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaagggtccagtcagattattgcgcaatattaccagtttcttcgactcggatttgaggggtacaagagcgtgatgaagaactgcatggagagcgcgaggacgctccgggagggcctggagaagacggggcggttcaccatcatctccaaggaggagggcgtgccgctggtggccttcacgttcaaggacggcgccggcgcgcaggccttcaggctgtcgtcgggcctgcgccggtacgggtggatcgtgccggcgtacacgatgccggcggcgctggagcacatgacggtgctccgcgtcgtcgtccgggaagacttcggccggccgctcgccgagcggttcctgtcccacgtcaggatggccctggacgagatggacctcgccgccagggcccccgtgcccagggtgcagctcaccatcgagctcggccccgcccggaccgccggcgaggaggcctcgatcagggtggtcaagagcgaggccgtgcccgtgcgcaagagcgtcccgctcgtcgccggcaaaaccaagggcgtttgctag</cdnaseq>

Protein Sequence

<aaseq>MVLTHVEAVEEGSEAAAAVFASRYVQDPVPRYELGERSISKDAA YQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEAINKNYADMDEYPVTTELQNRC VNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKRRWQNRRKAAGKPHDKPNIV TGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMVDENTICVAAILGSTLTG EFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVS GHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQF LRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFTFKDGAGAQAFR LSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRMALDEMDLAA RAPVPRVQLTIELGPARTAGEEASIRVVKSEAVPVRKSVPLVAGKTKGVC</aaseq>

Gene Sequence

<dnaseqindica>66..359#464..1134#1226..1280#1486..1968#gagacaccaatctcgtacgtagcatatctacatcgcaggaacacccaaatcactcgtgcgtaggtatggttctgacgcacgtcgaggcggtggaggagggcagcgaggcggcggccgccgtgttcgcgtcgaggtacgtgcaggacccggtgccgaggtacgagctcggcgagaggtcgatatccaaggacgccgcgtaccagatcgtccacgacgagctcctcctggacagcagcccgcgcctgaacctggcgtccttcgtcaccacctggatggagcccgagtgcgacaggctcatcctcgaggccatcaacaagaactacgccgacatggacgagtaccccgtcaccaccgagctccaggcaagcaatcaaacaaaccaaaccatataccctcgtctcctccatatcctttcgttgcattgcgttgtggttgacgtacgacgacgatggccctggcgttgcagaaccggtgcgtgaacatcatagcgaggctgttcaatgcgccggtgggcgacggcgagaaggcggtcggggtgggcacggtggggtcgtcggaggccataatgctggccgggctggcgttcaagcggcggtggcagaaccggcggaaggcggcggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgaccgaaggctgctacgtgatggaccccgtcaaggccgtggacatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaccggcgagttcgaggacgtcaggcgcctcaacgacctcctcgccgccaagaacaagcggacgggttgggacacgccgatccacgtcgacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgaggagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaaggcacgaaattatttttccagaattaaatgatccgtacatatatagagtggagtagtacattttgtgacttggcaagttcatttttgtgcagggtccagtcagattattgcgcaatattaccagtttcttcgactcggatttgaggtatactgagactaattgccccaaaatttcgaatttaaaattttgaaaattttatgtcaaactcctataatttcgattttttttttggccggatgcacatcctaccggaacacaccggcataactgaaatttcgcaaaattctttctgaaattgtgcacatttatttcagtttgattgaaccgttgggttgtttgattgttgcaggggtacaagagcgtgatgaagaactgcatggagagcgcgaggacgctccgggagggcctggagaagacggggcggttcaccatcatctccaaggaggagggcgtgccgctggtggccttcacgttcaaggacggcgccggcgcgcaggccttcaggctgtcgtcgggcctgcgccggtacgggtggatcgtgccggcgtacacgatgccggcggcgctggagcacatgacggtgctccgcgtcgtcgtccgggaagacttcggccggccgctcgccgagcggttcctgtcccacgtcaggatggccctggacgagatggacctcgccgccagggcccccgtgcccagggtgcagctcaccatcgagctcggccccgcccggaccgccggcgaggaggcctcgatcagggtggtcaagagcgaggccgtgcccgtgcgcaagagcgtcccgctcgtcgccggcaaaaccaagggcgtttgctagaccgggttaaatttttttttaaaatactggtgggaacacgaccaaaataaaatttcaaaatgggagcgtactaaaccttctttatgctacagtaactatgtagtacaagcatgccgaaagttaatcatcgtgtgtaatcgtattagagtttgcaacagcatattataatgtggagaagaacacgcaagcgacatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0447800, RefSeq:Os04g0447800