Os10g0104500

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Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0104500| Description = Similar to Notchless-related| Version = NM_001070555.1 GI:115480853 GeneID:4347950| Length = 9192 bp| Definition = ...")
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Gene Name

Os10g0104500

Description

Similar to Notchless-related

Version

NM_001070555.1 GI:115480853 GeneID:4347950

Length

9192 bp

Definition

Oryza sativa Japonica Group Os10g0104500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:327830..337021

Sequence Coding Region

328105..328188,328281..328337,328680..328734,328809..328951,330772..330909
,331010..331120,332621..332684,334179..334378,334678..334805
,335468..335593,335828..335917,336035..336116,336746..336910

Expression

GEO Profiles:Os10g0104500

Genome Context

<gbrowseImage1> name=NC_008403:327830..337021 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:327830..337021 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagcccgaatcagaaccagcagcaggagagcagcagcggaagcagcgtgatgtgccagctggtcagtcccgaaggagaccaccttggcgccgccctctacttgcctcacaacgtcggcccgccgcagctgcaggagatcgtcaaccatcttctccacaacgaggacaagctgccatatgcattctacatcggagatgaagaactctctgtccagcttggtgcttacatgcagcaaaagaatgcaaatgttgaggttaccctgcgcatagtatatcaaccgcaggcaattttccgtatcaggccagtcaaccgatgctctgctacaattgctggccatacagaagctgtactagcagtttccttcagtcctgatggaagatgtttggctagtggttctggtgataccactgttaggttttgggatctgagcacacagaccccattgttcacatgcaaaggacacaaaaactgggtcctctgcattgcatggtcgcctgatgggaatcatcttgttagtggaagcaagtcaggggaacttatattatgggacccgaaaacaggcaagcaattggggactccacttacggggcataggaagtggattactgctgtatcttgggagccagttcatttgcaatctccttgccgccgttttgtaagtacaagtaaggatggtgatgcacgtatttgggatatgaccacaaggaagtgtgtcattgcccttacaggtcacactaattcagtgacttgtgtgaagtggggtggagatggtttgatttacactggttctgaagattgttcaatcaaagtgtgggaaacttctcagggaaaattggtcaaaacactgcagggtcatggtcactgggtcaattcacttgctttgagcaccgagtatgttttgcgcacaggggcatatgaccatactggcaagacatattcaacagcagaggaaatgaaggaggcagctcttgcgagatacaagaagatgaggggcaatgcacctgagagactagtttctggttctgatgattttacgatgtttctctgggaaccaacaattagtaaacagcccaaagcccgcatgactggtcatcaaaagctcgtaaaccatgtctacttctctcctgacgggcagtggctggcaagtgcctcctttgacaaatctgtcaagttatggaatggtattacaggcaaatttgttgcagctttcagagggcatgttgcagatgtctaccagatcagctggtctgctgacagtaggcttctattgagtggaagcaaggattccaccctaaaggtctgggatattcgaacacgcaagttgaaacaggatttgccagggcacgcagatgaggtgtacgctgtggattggagccctgacggcgagaaggttgcatctggaggcaaggacagggtcctcaagctatggatgaactag</cdnaseq>

Protein Sequence

<aaseq>MESPNQNQQQESSSGSSVMCQLVSPEGDHLGAALYLPHNVGPPQ LQEIVNHLLHNEDKLPYAFYIGDEELSVQLGAYMQQKNANVEVTLRIVYQPQAIFRIR PVNRCSATIAGHTEAVLAVSFSPDGRCLASGSGDTTVRFWDLSTQTPLFTCKGHKNWV LCIAWSPDGNHLVSGSKSGELILWDPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCR RFVSTSKDGDARIWDMTTRKCVIALTGHTNSVTCVKWGGDGLIYTGSEDCSIKVWETS QGKLVKTLQGHGHWVNSLALSTEYVLRTGAYDHTGKTYSTAEEMKEAALARYKKMRGN APERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVK LWNGITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGH ADEVYAVDWSPDGEKVASGGKDRVLKLWMN</aaseq>

Gene Sequence

<dnaseqindica>8834..8917#8685..8741#8288..8342#8071..8213#6113..6250#5902..6012#4338..4401#2644..2843#2217..2344#1429..1554#1105..1194#906..987#112..276#ggggtgtggcgtgttgtgttgttgcctccgcctccgccgccggccgctcgagcctcctcctctcccgccagccgccgccgccgccgccgctgcttgcttgcgatttttcagatggagagcccgaatcagaaccagcagcaggagagcagcagcggaagcagcgtgatgtgccagctggtcagtcccgaaggagaccaccttggcgccgccctctacttgcctcacaacgtcggcccgccgcagctgcaggagatcgtcaaccatcttctccacaacgtaccactatctcttcctccttactcttcttcttcttgcctgcctgcttgcctgcctgataccttttttttttaatttcatattgatattggcttagggaccaattttatttcttctcctttttttcttttcttttataaagaaagaaagaaagaaacattacaatgtatcaatctgcctatctagacaacacataagctgtctgtactcgttcctagggcccatttgaatcgcaggattgagaaaacgcaggaataggaaaaacgtaggattttaataagaatgaagtgtaaaacagatgattgcaaaacgcaggaaaaatacaggaatgaccgtttgattgaaccgcaggaaaaacgcaggaattagatgagagagatagactcaaacgaaagttattttttcttgcacaactctttggtgagagaggaaatccctttaatgtttaacaagggaaaaaatacaaggttacaattcattatgacaagtttaattataatatagtaaaggggaaatatttgagctaattgtcacgttgcatttatcttcacctatgtaatgtactcccatttggcagttgtcctgcatacttacttgtgtgacctcatcactctaaacatttactttaggaggacaagctgccatatgcattctacatcggagatgaagaactctctgtccagcttggtgcttacatgcagcaaaagaatggtgagactccactcacaagttcatcctacatttcttttcgtcgattaagaaaattaaaacaaactaggtgttgcatctcatttctgatttctatcttttgatttttgttaaatgaagcaaatgttgaggttaccctgcgcatagtatatcaaccgcaggcaattttccgtatcaggccagtcaaccgatgctctgctacaattgctggtatgtataccttggattacgttcatttcattgttttctttttccattacaattttaggactcttttatttgacatgttctcatattgctgggattacaatgggaatatcatcggacagacaaaccctttgcatccttgttttatttgtcattgacagcaccagtaccagcctcaattatgtcgattttgagctttcttataccactgcgaatgatgtaatttatcatctgcaggccatacagaagctgtactagcagtttccttcagtcctgatggaagatgtttggctagtggttctggtgataccactgttaggttttgggatctgagcacacagaccccattgttcacatgcaaaggtgaatcttagcattcttgcatacagataatttcaagtcatttttctcataccttaaataagtcgaatgcccgtaattgcattggtgcttgttttatagagttacaccatggttattgttctttacggtaacctagtgcttaccaacacttgattaacaatttctcatgagagagatcttagatgattgatgcaaaagtgtttagcaactcagtgcttatctttatcaatatgtcctaactcacaatagacctgtaagttactttcagaattaatcttttttaatggtagacctaaccttaacatgtactggataatcaaagcttaatgtttgataccatagtatacagtgtttgttccttttagatgaatttagtaggttgagactattaaaagataacataatttattacttgtaattaacacattacataaattgtttatttgtcgatattggatgttcagacgacctaataggagtttactgttgtaacattgtgataaaactcatgtttatcagacattacttccagtgcatttgagtataattttttggtactcttagtctcgttgacagttccatttgcatatcggtatatccaatgtttttgagggtgataccattaatatttgaaagttatcaaataacaccgcatcttccaggacacaaaaactgggtcctctgcattgcatggtcgcctgatgggaatcatcttgttagtggaagcaagtcaggggaacttatattatgggacccgaaaacaggcaagcaattggggactccacttacggtaagattatgacatctttgtctttcaacctgtagtttttgtagaagtatgaaataagaattattcagttgcatatttgcagacctaactgccctatgtgtcaattcatgtgaacctggaaaatatatgttagttacttagttgacttgaagataactgctccagttcttttttcttagtaccatggattcacatacacttaatgttggaaatagtatatggagttgtactttatatattgcagaagtttcttttttcttgccatgcagtactcattgatcattgcctttactcattaggggcataggaagtggattactgctgtatcttgggagccagttcatttgcaatctccttgccgccgttttgtaagtacaagtaaggatggtgatgcacgtatttgggatatgaccacaaggaagtgtgtcattgcccttacaggtcacactaattcagtgacttgtgtgaagtggggtggagatggtttgatttacactgggtaagactattacaccttctgtttctattataaggcgtattttgtttcgttaagacaagggtttgactaacaatttctttacaagtaatatattatttatgcgttacaaaagtgtaatcataagtaagtactttcaaatacgaatctaataacatcaattttgtgtcacacaaactataccctaatggagtaattattggtcaaagtcttgtcctaaagaaacaaaatacatattatatttttgatttttcaaaaaagggagacatacataggcagtcctttcagcattttgaaataaaaggataatgactttttttttcttttgtacttggtcacttttggttattgccattggatttgttaaaataggaacaacaacaaattttataatgccatcatggcaccattattccatggtgcaagaaagcactaggcgttagtcgggtggctgggtggcgcctagtgcctaataggcctaggtcagaccaactagtcaatccaagaaactagcaagcatattacataaaaaatagactatataacactgagatagcaagaaaacaccacgcaaggtagttgagtcacctaatgcaccatctaatgcgctacccagcgcctagtgcctaatgggttaggcagtggctagggctgtgttttagaatactgcattatttaggattgaatcatataccagcgttgtgatacagggaatatatttgtagtaaaatcgtattgcgcctgcatatatatgatgtatgaactctatttctgtttctgctgctatgtttgacagataagttaatcgagatctcaaaccactgtttgtgactagaaattctgaacatgacagattcagttcagattctattcaatctgtattttagatggaatctatttatataggaatgcttactgcttctactttggcaattgtgagaaagaactatcaagatagcttccagcaacacaggccacaatcctttattggtgccatacagacaattccctacatttattgatatttatttaattgagttattgtgagaaacccaatacgtaagtgacgttccgttagccaaaggatacacttttgctggtaggaataggccttgatcaggctaagagttccagttacttcccttttcctcatactccgtttactattttgtttatttataatagacagctataacttgaggcaaaagtggtcgagttcttcctagatggttaaaattaagtagctgaaagcatatgcgtaatcacttagtctgttatctcatttatcatgaatgtttatagtgttgcaaaattaagtagctgaaagcatatgcataatcacttagtctgttatctcatttatcgaatgtttatagtgttgctagaaatgatgtttaatgctatgctgtatgtttatttgtacaaaatgctgtattttacagatacagttcttaaaatgctatgtacaattctaaaacaaatgtatgtgtactgcagttctgaagattgttcaatcaaagtgtgggaaacttctcagggaaaattggtcaaaacactgcaggtaatgtaccagcatttcagtggacattcaaagatttatgcaaacttttatgctcccaagttggctttgctagtattgaattatgagcaaaatagcaaatatcacacaaccacatgctttatgaataaagtaccagagaactacaggttttatgatcaattccagagagatacagattttacgggaagttgtattgggaaatggcagattctgcagcttctgaggaattcctggcctgcatgttctacatatggacataaatgggtctggagatgctcaaacactagttaggtcccgctgaactttcaactttgcgtgggtttgtagtgtaactattgtaggggactgatactacacacgttctagtcatgcatcatccttacctacagaataagcacatgtgaatgcatattctttatgaacgacatatctgaggcaaacatttttatttccttctaatgttgatggcaatgatagtttaatctaggggtggaaacgagccaagcctggctcggctcggcttgcagtggctcgcaaaaaagtaggcctggcttggttcggcttggttagggaaacaagctaaaacttgagctcggctcggctcgttctggctcgagctggcttgcaagccttcctgttgaaatatctcttcatatatattttataattattaaaaaaagtaaaaccaaatcatcaacatgtaaactttaaataagtttatatattcaatacttcaaaatcttgatgataaattttaagttgacaaattataatgccatataaagtaaaataatcgatataaacacacgatgacctaggctcgcgagccaaaacaagtggctcacgagctagctcggctcggctcatttcagcaacgagctaaaaaggaggcaagcttggctcgtttggcttacgagccgagccaagccaaccaagctcgagccaagcccgagctgagctcacgaacccgagctttttttccacccctagtttaatcttttaagatgcaagtagcctatgaaaggccatacaaacttggtttgggctcaaaaaacaaaatagcaaatcaaatttacaaggatgcccatctacagcattctaaggccaaaccccgataccaattgctttgtgaattagagaattcattgccatgtagttgatggtttactctgaccagggggtgttagaggaagaaaaaaaacaaaatttactttggaagacgtgtgcatgctatagccatgaactgagggagtaattttgtgtgcttaattcatgaatcgtaccaaataaattatacattctttcaattgtgaactgtcagctatacccaggaaacaattttgtggaatatctttgatctgattttgcctgttttttgcatgtgctggacctattattttggtagctgtgaactattaccttgctttcaagtcagctattctatgctagttgtcactgtcatcttgttaaagtagttacacacttacactgcatattcagggtcatggtcactgggtcaattcacttgctttgagcaccgagtatgttttgcgcacaggggcatatgaccatactggcaagacatattcaacagcagaggaaatgaaggaggtatgatgtgatcataaattagtgttagaactgactcttaatattttcatttgttgcttgctgaaatgaattttttcacctgagaactttggatatccaggcagctcttgcgagatacaagaagatgaggggcaatgcacctgagagactagtttctggttctgatgattttacgatgtttctctgggaaccaacaattagtaaacagcccaaagcccgcatgactggtcatcaaaaggtatattgtcctgacagctccatgaaatgttcttgcatttgtatcattgtatgtacattttgacttgtttatgcattcagttttgtctcactgaatactgagaaaagattgaaaattctatgagtttcctccctgaaacttgaaaataataatgaatcggtgtcatttaaaattaatggtatgagtgtttccaaactccaaacccatctatagaacagattattgttgaaatcattaggacttgtgtaagttgtcaaatggcatgaacaagttgggagcgctagataaaaaccattcgatattattgcaagtcgccctcgcgcggcggctcgggggcgaaaccctagccgccgccgcccctcctcctccctcctccgtgcttcgccgctgccggagcttgtcaccggcaaagccgggcgacgcgctgggatggcggcggcggggccatcctcctcggctccatctcgccccggcgcgggcgtggcgacgatggcggcgggacggcgaggtcgcggcgacggggacggcgcggcggtggggctctccacggcgcggcggcggggctctccgcggtggtcggctctggctccggcgacgggtgacggagtcgctagatccggttgcccctctggccggggcgaccggcgacgggctcggtcgacgccgacgccgctcgggcgtaggcggatggccggtgacgggcttctccggcgtgggctcgtcggcgacgacggcatcgggtcggcggcggctcgcattcgtcggcggcggctccagtccggctctcggtggagcgcgcttcggcgccggctgccgctgacctggccgggggctgccgatctgctgcgattttgccggcgacggggacggcgcctccatctccctccctcctttttctccagatccggttcccctcttctttagttgttcttcttccagtgctcaccggcggtgcggcgcccgctcccctcttcttaggggctcctcccttcttaggctaggctacttccagttgttgccggggagctccttggtgcggtaggggtggcgtgcggagttggtttccggcgtcctgtctcgctggcgtcggccgcgccgtaggtttgctgcagttgggttcctgtgtgtgaggtggtctctggtcgagctgcaatgtgattgactgttgaggcagagtcggagctgcttgtcttgcaagctcggcaacgatgaccctcaatagacgtccaggcaacgcgatgagggtttggaggtggagcattttgagagagtctcgggtgaaaaccttgcctagtgtttttctaggttgatgatatcgacgcctgtgggtgccgtttcctccttggaggtatcgtcatgatggctctctctcgctttaggtgaaaactgggttccttttggaacgggcgttgacagcattcttgatgttgttcccttgttgaaggcttcgctcagaaggtttctgctccactagaggatgtttggtggttctggagaccttgtgcattatgttgtcgaagctgcttgcctttggcaagctcggcaacgatgagttttgtgaggtctcaatagttgctttcttttccttttctgtataggttttcgccggtttcccatttaattaaccgtgcttgttcggtttttgggcccggtttcccttattaactgggccaattctcttctataaattccggcgggagaaactcctgtcgtcggttcctcgaaaaaaaaatattattgctttttttaccaatgcagggtaaatttttttatttaagtgtgcttggaaatgattttgtcatttgcttttctttgtgcagctcgtaaaccatgtctacttctctcctgacgggcagtggctggcaagtgcctcctttgacaaatctgtcaagttatggaatggtattacaggcaaatttgttgcagctttcagagggcatgttgcagatgtctaccagatcaggtcggtttttctatcttgctgtttccattgtatgtacatgccgcaatgcctaatatcatcatttctgtccatagctggtctgctgacagtaggcttctattgagtggaagcaaggattccaccctaaaggtatctatctctgtctccgcttagttctctgtcttttacctaactggtcaccgacatgccattcagtctgtatgttgtcaatctggcactggaattcattatatcagaatacttgtctttgaggagttaattctgtttgcttgagtagtcatccgaaaactggtgaatctgacataaatattggttggaactgccaagtgtgactggtatcatacaattgtttttaggcatgcccttttaattatgtttctattaacttggcttgtaaagtccattacttgcatagcatggaccatggaactgatacgttatgctcggtctctatttgttggtacgattcaggtctgggatattcgaacacgcaagttgaaacaggatttgccagggcacgcagatgaggtacatgcatgcatattttggaacaataaaaatctgaattgaaattattatagtgtagtaacaaagattatgtatatatatataaatgtaaggtgtacgctgtggattggagccctgacggcgagaaggttgcatctggaggcaaggacagggtcctcaagctatggatgaactagttcccttagagttaaggtacttagctagtagcttcttgtcatggtggctctctcttgttcttggtgagagattttgtagggttgggttggcatttcttgtttttattttgcaaccaaaggcttgagggtttatagctggttttttttagataatggaatataatattccggtttttgttcaaaaagaactacagccaattattacaaagatccactccagaagagagtgtagtttaagacaagttgaacacaccaaataagagaagagataaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0104500, RefSeq:Os10g0104500