Os04g0448500

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0448500| Description = Peptidase A1, pepsin family protein| Version = NM_001059458.2 GI:297602821 GeneID:4335981| Length = 1658 bp| Defini...")
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Gene Name

Os04g0448500

Description

Peptidase A1, pepsin family protein

Version

NM_001059458.2 GI:297602821 GeneID:4335981

Length

1658 bp

Definition

Oryza sativa Japonica Group Os04g0448500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22752236..22753893

Sequence Coding Region

22752342..22753736

Expression

GEO Profiles:Os04g0448500

Genome Context

<gbrowseImage1> name=NC_008397:22752236..22753893 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22752236..22753893 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgccgccgtgttgctgctgctcctcgcgctcgccgccctcccggcgtcgtgcgcgccgccgagatccttccgcctcgagctcgccagcgtcgacgcctcggcagccgacgccgccaacctcacggagcatgagctcctgcggcgcgccatccagcgcagccggtaccggttggccggcatcggcatggcgcgcggcgaggcggccagcgcgcgcaaggccgtcgtggccgagacgcccatcatgccggccggcggcgagtacctggtgaagctcggcatcggcacgccgccgtacaagttcacggcggccatagacaccgccagcgacctcatctggacgcagtgccagccctgcaccggctgctaccaccaggtcgaccccatgttcaaccccagggtgtcctccacctacgccgcgctgccgtgcagcagcgacacgtgcgacgagctggacgtgcaccggtgcggccacgacgacgacgagtcgtgccagtacacctacacgtacagcggcaacgccacgacggagggcaccctggccgtcgacaagctggtcatcggcgaggacgcgttccgcggcgtcgccttcggctgcagcacctccagcaccggcggcgccccgccaccgcaggcgtccggtgtggtcggcctcggccgcggcccactctcgctggtgtcccagctctctgtgcggaggttcgcctactgcctgcccccgccggcgtcgaggatccccgggaagctcgtcctcggcgccgacgccgacgccgcccgcaacgccaccaaccggatcgccgtcccgatgagacgggacccgcggtacccgtcctactactacctcaacctcgacggcctgctcatcggcgacagggcgatgtccctgccgccaacgacgacgacgacggcgacggcgacggcgacggcgccggcgccggcgccgacgccctccccgaacgcgacggcggtcgccgtgggcgacgcgaacaggtacggaatgatcatcgacatcgcgtcgacgatcacgttcctggaggcatcgctgtacgacgagctggtgaacgacctggaggtggagatccggctgccgcgcgggacggggtcaagcctgggcctcgacctgtgcttcatcctgcccgacggcgtggcgttcgaccgggtgtacgtgccggcggtggcgctggcgttcgacgggaggtggctccggctggacaaggcgcggctgttcgcggaggacagggagagcgggatgatgtgcctgatggtggggagggcggaggcgggcagcgtctccatcctcggcaacttccagcagcagaacatgcaggtgctctacaaccttcgccgcggcagggtcaccttcgtccagtccccctgcggcgccctgcgatga</cdnaseq>

Protein Sequence

<aaseq>MNAAVLLLLLALAALPASCAPPRSFRLELASVDASAADAANLTE HELLRRAIQRSRYRLAGIGMARGEAASARKAVVAETPIMPAGGEYLVKLGIGTPPYKF TAAIDTASDLIWTQCQPCTGCYHQVDPMFNPRVSSTYAALPCSSDTCDELDVHRCGHD DDESCQYTYTYSGNATTEGTLAVDKLVIGEDAFRGVAFGCSTSSTGGAPPPQASGVVG LGRGPLSLVSQLSVRRFAYCLPPPASRIPGKLVLGADADAARNATNRIAVPMRRDPRY PSYYYLNLDGLLIGDRAMSLPPTTTTTATATATAPAPAPTPSPNATAVAVGDANRYGM IIDIASTITFLEASLYDELVNDLEVEIRLPRGTGSSLGLDLCFILPDGVAFDRVYVPA VALAFDGRWLRLDKARLFAEDRESGMMCLMVGRAEAGSVSILGNFQQQNMQVLYNLRR GRVTFVQSPCGALR</aaseq>

Gene Sequence

<dnaseqindica>107..1501#atttcatacgtccgtccaagcgacacccgcccacatgcgtaacgccggcagttgaaccagttcgcggtcacccccactggccagtgggcactgccacgccgcgacgatgaacgccgccgtgttgctgctgctcctcgcgctcgccgccctcccggcgtcgtgcgcgccgccgagatccttccgcctcgagctcgccagcgtcgacgcctcggcagccgacgccgccaacctcacggagcatgagctcctgcggcgcgccatccagcgcagccggtaccggttggccggcatcggcatggcgcgcggcgaggcggccagcgcgcgcaaggccgtcgtggccgagacgcccatcatgccggccggcggcgagtacctggtgaagctcggcatcggcacgccgccgtacaagttcacggcggccatagacaccgccagcgacctcatctggacgcagtgccagccctgcaccggctgctaccaccaggtcgaccccatgttcaaccccagggtgtcctccacctacgccgcgctgccgtgcagcagcgacacgtgcgacgagctggacgtgcaccggtgcggccacgacgacgacgagtcgtgccagtacacctacacgtacagcggcaacgccacgacggagggcaccctggccgtcgacaagctggtcatcggcgaggacgcgttccgcggcgtcgccttcggctgcagcacctccagcaccggcggcgccccgccaccgcaggcgtccggtgtggtcggcctcggccgcggcccactctcgctggtgtcccagctctctgtgcggaggttcgcctactgcctgcccccgccggcgtcgaggatccccgggaagctcgtcctcggcgccgacgccgacgccgcccgcaacgccaccaaccggatcgccgtcccgatgagacgggacccgcggtacccgtcctactactacctcaacctcgacggcctgctcatcggcgacagggcgatgtccctgccgccaacgacgacgacgacggcgacggcgacggcgacggcgccggcgccggcgccgacgccctccccgaacgcgacggcggtcgccgtgggcgacgcgaacaggtacggaatgatcatcgacatcgcgtcgacgatcacgttcctggaggcatcgctgtacgacgagctggtgaacgacctggaggtggagatccggctgccgcgcgggacggggtcaagcctgggcctcgacctgtgcttcatcctgcccgacggcgtggcgttcgaccgggtgtacgtgccggcggtggcgctggcgttcgacgggaggtggctccggctggacaaggcgcggctgttcgcggaggacagggagagcgggatgatgtgcctgatggtggggagggcggaggcgggcagcgtctccatcctcggcaacttccagcagcagaacatgcaggtgctctacaaccttcgccgcggcagggtcaccttcgtccagtccccctgcggcgccctgcgatgagatctctcgtcaccagtatctttgtaaaaccctgcatacatcaattcatcatcatcgtggctggcttatggcctgatgtagttagtgctcatcaacaaattatttggatactcagagatgctttgattagcttgaatcataaaacattttatacgac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0448500, RefSeq:Os04g0448500