Os04g0449500

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Revision as of 11:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0449500| Description = Conserved hypothetical protein| Version = NM_001059467.1 GI:115458663 GeneID:4335990| Length = 5270 bp| Definition ...")
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Gene Name

Os04g0449500

Description

Conserved hypothetical protein

Version

NM_001059467.1 GI:115458663 GeneID:4335990

Length

5270 bp

Definition

Oryza sativa Japonica Group Os04g0449500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22795060..22800329

Sequence Coding Region

22795368..22795536,22796211..22796656,22797758..22797932,22798012..22798118,22798236..22798524
,22798820..22798953,22799106..22799301,22799489..22799597,22799717..22799843

Expression

GEO Profiles:Os04g0449500

Genome Context

<gbrowseImage1> name=NC_008397:22795060..22800329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22795060..22800329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaaggtgaaggcgtgggcgggggccaactacgcggagcccatggggtcggtggagcagtcgctgcgcgtcgcgtacgtggtcctctccttctgcgccgccttcttcctcggcggcatcaaagcggcggtcgtcggcccggtggcggcggcgctgatggtgctgggcaacgtcggcgtgatactcctcctcttcccggcgcacgtctggtggaccatttactccctcatcaagactgaacgcatcaacgccggcctgaaactagcggtgctcatcgcgctgccggtgctgttcggcctctggctggggctgggcatcttcgggagcgcgctggtcgccctcggctatggcttcttcacgccgtggatcgccaccttcgaggcgttcaggcaggagagcgagtccaagaagttcgtgcatggcgtcgtggacgggacgtgggggacgattaaaggcagctgcacggtggttagggactttgcggatttatgcttccactcgtatcctgtttatctgaaggagctgcgcgaaagctcgcagaattgcgagccccattccatcagggtgttggatgtgccctcatgtatagctgttggtctcttgggattaatcgttgacattccgctctacaccgtaattgcgctgataaagagcccctatatgctcttcaaaggttggcagaggctgcttcatgaccttataagccgcgaaggtccattccttgagacagtttgtgtgccgatcgctggcctggctatccttttctggcctctggtggttgttgggagtgtcctactagctatcgtctcgagcatttttgtgggtctctacggagcagtcgttgtctaccaggagaagtcgttccagaggggagtttcttatgtggttgccatggttgcggaatttgacgagtacaccaatgactggctttatctccgggaagggacagttcttccgaagccttcctaccgtaagagaaaatcgtccagttccacggagttttcagtcagaacgaatgcttctgttaaaggaggcgaccaacctagttccaatgaagctccagcaatgctggttccaactttggccccagcaaggtcagttagagaggccatacaggaagtcaaaatggtccagatatgggaaaatatgatgaagaattgtgaactgaggggcagggatcttctgaatttaaacgtcataacaactgttgatcttactgaatggttacgaacaaaggaaagtgggcatgaagcaataggactgggagtaccttcttattctctgctgtgtatgatcctccattcgatcaaggccggttctggagggctattgataggcaatggcatcgaaatcaatcaatataaccgcccccaagatcggttgatagactggttcttgcaccctgtgctggtgctgaaagatcaaatacaagcgctgaaaatgacggaggaagaagtgaggttcttggagaagctgacccttttcattggtaattctgagagggcaaatgggtgggataatggtgctgaaatcccccaagatcctgtaagggcaggacagatccaggccatcagtagaaggttggttggaattgtaaggagcatgtcaaagtttcctacgtacaggaggagacacaggcacgtcatgaaactgctcgtcacgtactccgtcgagaaggaagggtcgttcagatcatccgcgtcgaatcgatcagtacctatctttgagataacgcaattggaagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MDKVKAWAGANYAEPMGSVEQSLRVAYVVLSFCAAFFLGGIKAA VVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTERINAGLKLAVLIALPVLFGLW LGLGIFGSALVALGYGFFTPWIATFEAFRQESESKKFVHGVVDGTWGTIKGSCTVVRD FADLCFHSYPVYLKELRESSQNCEPHSIRVLDVPSCIAVGLLGLIVDIPLYTVIALIK SPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVVGSVLLAIVSSIFVG LYGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLPKPSYRKRKSSSSTE FSVRTNASVKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIWENMMKNCELRG RDLLNLNVITTVDLTEWLRTKESGHEAIGLGVPSYSLLCMILHSIKAGSGGLLIGNGI EINQYNRPQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNSERANGWDN GAEIPQDPVRAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEKEGSFRS SASNRSVPIFEITQLEV</aaseq>

Gene Sequence

<dnaseqindica>4794..4962#3674..4119#2398..2572#2212..2318#1806..2094#1377..1510#1029..1224#733..841#487..613#ctcgaacacacccttacttctgtccccttctctgagtctgctctgctcgtccccaagaacacgattcagcgacgcgcgcgcaacagtgccgccgcggccgccggcaggtttgacccatccaaagccaacccccaaaccgacgaatcaatcaagaacccccccgaatctaaaatctttctttaagagctctccctcccctggagcggcttctcccgcaagccgctgaatttttccaccaccaccggtcgtcgcggattcccgcgacagccagccagcgaggacgcgcgctttctttttcttctttgtttttccctcgtcctctccgtccggctgcagaaaagcttccatctctctgaagctgtccttgattcttgcggaggtagacaggcaggtgtagtcctttgtgtgcccgtgcgtatatgtgagcgagtgctaccgggcgcgtcgacgccggcgacgaacgaacgatcgattcgattcgactcgatggacaaggtgaaggcgtgggcgggggccaactacgcggagcccatggggtcggtggagcagtcgctgcgcgtcgcgtacgtggtcctctccttctgcgccgccttcttcctcggcggcatcaaaggtgcacgcacgctttccctttcaatcacgtcttggctgctggcgccaccgtgggttcgtcggagttgttgccgccgtgtgcttattttttttcttggttgggatacggttgtggtgcagcggcggtcgtcggcccggtggcggcggcgctgatggtgctgggcaacgtcggcgtgatactcctcctcttcccggcgcacgtctggtggaccatttactccctcatcaagtaagaaaaaagaaaataaaatgtttttatttctttttgatttttgcgtttacttcagttggatacaggaagaaagaattcgagttcttgtttgcgactcgtaatgtttttcgattttttttcttctgtcaatttcgtctataccaaatgatcactgttgatctgttcctctgcattgttaatccaggactgaacgcatcaacgccggcctgaaactagcggtgctcatcgcgctgccggtgctgttcggcctctggctggggctgggcatcttcgggagcgcgctggtcgccctcggctatggcttcttcacgccgtggatcgccaccttcgaggcgttcaggcaggagagcgagtccaagaagttcgtgcatggcgtcgtggtaaggacacgatgccttcttccccttctgaattggagtacaggattaggcaagaacacgagttcaacaagctttgctgcaaatcggcaaggcactgtcgttgttagcgatgtgtccgggcgctcattgagatgatgatttggtttgagcaggacgggacgtgggggacgattaaaggcagctgcacggtggttagggactttgcggatttatgcttccactcgtatcctgtttatctgaaggagctgcgcgaaagctcgcagaattgcgagccccattccatcaggtaattgttatcctactagactagaatgtctctctttggttattcaggaatcagccccatgctgtgtgtaatccatgtgttaagcatggccttgtcatgagaaggactggcacaggaattctgccattaaaaactctgttatagtcatatgccaatcctcatgttagactgttagtacagtctattctggggtgatggtgctgtcacgatcattgcacattacagttgcttgaaattgcgattctcgaatgccgtaaaattcaagctgaatgactgaatttttttttccctgtagggtgttggatgtgccctcatgtatagctgttggtctcttgggattaatcgttgacattccgctctacaccgtaattgcgctgataaagagcccctatatgctcttcaaaggttggcagaggctgcttcatgaccttataagccgcgaaggtccattccttgagacagtttgtgtgccgatcgctggcctggctatccttttctggcctctggtggttgttgggagtgtcctactagctatcgtctcgagcatttttgtgggtctctacggagcagtcgttgtctaccaggttgctgtcttgacatagtgtttgttgtgttgttccaattctttcccatctccttacgtgtctaaacaggaaggagagattaagtgatagtaacttgtgtttatggatctatcgcaggagaagtcgttccagaggggagtttcttatgtggttgccatggttgcggaatttgacgagtacaccaatgactggctttatctccgggaagggacagttcttccgaagtaagttcagactgcctcttttgttgctgaacttctgtgctcacgttgctgattcctcagtgaaaatattttctgctaggccttcctaccgtaagagaaaatcgtccagttccacggagttttcagtcagaacgaatgcttctgttaaaggaggcgaccaacctagttccaatgaagctccagcaatgctggttccaactttggccccagcaaggtcagttagagaggccatacaggaagtcaaaatggtccaggtatgtttcttggacgtgctaaattcttattaattcgacttatttgcacaagaattgccaagggcacatcattaattcattgtacaacaccagccaaggaaaaatggtgttctctctgagcaatttttttgatagttaaacttggtaaaaagtgcattcattcctgtagtaccatcaatatttgccctgcctagaaaggaaaggcatctaatactagttacaacacttgttccttgaaagtatagctagacatttttattggtgcataactgcgtacttgcatcaatgtacttagattaggtgagctagttctaagtgaggtactgctataaatgtgatgatgccatgaaaccacggattgtaaagactactattcttattgggtccatgctctcttagatttggtgaacaggttctaatttaagaaatatcataaatgaaggagatccttgaatattttaattgctgtgtttacgtccttaaattatgtgagctctttttattagaggaaatatttcaaatgaaagtaaccacacgatcatctttttttttggatgatttcatttaattgtgtcagtatcatgacttatcagtgaatggaagcccacaaaagaagcaatggttagtagttagttaccattgcacattgcttgtatggttgaaatgaagcttgacgtgagaattcagaagcatttttccctagagaagtgtgtggtccaacataagcaacagttgaagtgaatatgttataaccgagtatccatctttctatggtggcttatcttggtatatatatcaacaggaaaagcataggaattcctggtttcggaaaaaaaatcaatatatcaacataaagatatttaataagatgatctggaatttgccttctttttactttttagcaagacgcagagacactggcttatgagaaattgagaataatttaggttttgtgttatttatacattttagaaaggatatatgttccaccaatatggatcatgtttaatggtacaaacttacaatccaaacatgctttggttattcattttgattaattaagtcctgcctgaaatcctaacttagctccttgatttgtagatatgggaaaatatgatgaagaattgtgaactgaggggcagggatcttctgaatttaaacgtcataacaactgttgatcttactgaatggttacgaacaaaggaaagtgggcatgaagcaataggactgggagtaccttcttattctctgctgtgtatgatcctccattcgatcaaggccggttctggagggctattgataggcaatggcatcgaaatcaatcaatataaccgcccccaagatcggttgatagactggttcttgcaccctgtgctggtgctgaaagatcaaatacaagcgctgaaaatgacggaggaagaagtgaggttcttggagaagctgacccttttcattggtaattctgagagggcaaatgggtgggataatggtgctgaaatcccccaagatcctgtaagggcaggacagatccaggccatcagtagaaggtaagttgttttctgctacttggttacatacttgcatgtgttatggaaaaagtgttttcattcctcaaaggatctttagtcatatgaatagtcataaaaatttttaaaaaatgacaagatagattaatatgatatgtattactctacaaacatgcattttcaaattcaacatctacaagttgtaacaaatatccccgcaaaaaaaaatgttgtaacttattgtgaatgtgcatatagtagtttcaattgaatttgttccttttggtacaactcatagaaattgaatttaaccttgcatgtttgtggagtgatatatctcatattagtttatcttatatcatgtttttaaatttctgatgagagagtggattttaaactctcgatgggatatcccctcgttgtatagtgatctatcacatattgatcgatcttgttgaactttttcataactatttgagtggcatgtaaacaacgaggagacgtcccctcgagaatttagaatagtttccctttctgataaatatttaggtcacaagtaagaaacgaggggatgtccttttgatggatgaaattaaaatccatctcctgtgttctattgatttcagtagcagtgttattagtgaggttgttctgtccgatccttggaaggttgttctaatgctgttggtttgcaggttggttggaattgtaaggagcatgtcaaagtttcctacgtacaggaggagacacaggcacgtcatgaaactgctcgtcacgtactccgtcgagaaggaagggtcgttcagatcatccgcgtcgaatcgatcagtacctatctttgagataacgcaattggaagtgtaattgaaagttgaaaccatattcagaaatcagagtcagataggtcccttcttcaaatggtcttctttcttcagtaaatatcgcacgccgttttgtcagtgcttgtgtttccccaaatctaggaggttttgtatagctttattttttttacaaggagagagatgcctcactccagaacttctcgctgtgagattcatttgccaaaactgcaggcatgaatgaatcatccattgtacatttgtattgtaaattctgtacatactccttgatcagatcagatacacatgcatgttggttcttttaccttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0449500, RefSeq:Os04g0449500