Os04g0450400

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0450400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001059474.1 GI:115458677 GeneID:4335997| Length = 154...")
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Gene Name

Os04g0450400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001059474.1 GI:115458677 GeneID:4335997

Length

1544 bp

Definition

Oryza sativa Japonica Group Os04g0450400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22840672..22842215

Sequence Coding Region

22840829..22842076

Expression

GEO Profiles:Os04g0450400

Genome Context

<gbrowseImage1> name=NC_008397:22840672..22842215 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22840672..22842215 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctccaccaccgccgggcgctgcactccaacgactgcgacgacggcggctacggctgctcctcgtggccgctgtcccctcctcctccgagcgtcatccttactcccttcgcttccccttcgccggcgccctgggcttgcccgcccgcttttcctgccccgtcgccgtctcctctccatggcgccgcggggggcaggagggatcagggaggataccacggctccccaccaggcggtggcggtgatgcggacgagcaccgccgacgcatcatcaaccttatcgtcgtcggcgccgcggcgctcgcgttcctctccatgatcctcctcgtcgtgatcgtcgccgtccggcggcggaggctgcggcggcggcggcagaggcagcaggcgctcctcgcccccgcggcgccggccgacgcggtggcggtgaacgtcgaggacggcggggatgacgatgcggagggagggggaggaggaggaggaggaggaggagtggtgcaccacatctggtacatccggaccgtcgggctcgacgaggcggcgatcgattcgatcgccgcgacgcggtaccgcgcgggcgctgggctcctcggcgccgccgactgctccgtctgcctcggcgagttccaggacggcgagctggtgcgccttctccccaagtgcggccacgcgttccacgtcccctgcatcgacacgtggctccgcgcccacgtcaactgcccgctctgccgctccgacgtgctaggccccgccgccacggccacggagtccggtggcggcgacaccggctccatgccacaagctgatccagtcgcaaacaccatagccgcagcccagcaagcggctgcgccgggcgatgcaatcttggaacgccaagaagaagaagaggaagcagaacaggaggaccaaggagcgccgccgcacatggaggaaaaccggcaagagcaatccagctcaccggatccattgccgccgccgcgcaacgtgcggcgcgcggcttccatggacgcggcgatcgtgtcgaccgccgcagaggtcgcggcgctagagcggctgccggaggcggctcctgaagaggagcagagcggcggcggcggcggcggcgacaagcgcggcggggctcctggcgcgtcttgcctgaaggtctcgagctccggccgcctgagcaacctcggcgccgccgagaggctcccgaggtcgttcttctcgcggcattgccgtgcccggagctcggtgctcccgctgtga</cdnaseq>

Protein Sequence

<aaseq>MPLHHRRALHSNDCDDGGYGCSSWPLSPPPPSVILTPFASPSPA PWACPPAFPAPSPSPLHGAAGGRRDQGGYHGSPPGGGGDADEHRRRIINLIVVGAAAL AFLSMILLVVIVAVRRRRLRRRRQRQQALLAPAAPADAVAVNVEDGGDDDAEGGGGGG GGGGVVHHIWYIRTVGLDEAAIDSIAATRYRAGAGLLGAADCSVCLGEFQDGELVRLL PKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGGDTGSMPQADPVANTIA AAQQAAAPGDAILERQEEEEEAEQEDQGAPPHMEENRQEQSSSPDPLPPPRNVRRAAS MDAAIVSTAAEVAALERLPEAAPEEEQSGGGGGGDKRGGAPGASCLKVSSSGRLSNLG AAERLPRSFFSRHCRARSSVLPL</aaseq>

Gene Sequence

<dnaseqindica>140..1387#tcgcgtgaagaagactcggcacgcgttcgatcccgcgagcgaccttcctcccaccttcctccgcaccacgcccgcgcgccgcgccgatgccgccggcgagtcgtcgcaggtcgtcgcccacctcctgacggcaagcgcgatgccgctccaccaccgccgggcgctgcactccaacgactgcgacgacggcggctacggctgctcctcgtggccgctgtcccctcctcctccgagcgtcatccttactcccttcgcttccccttcgccggcgccctgggcttgcccgcccgcttttcctgccccgtcgccgtctcctctccatggcgccgcggggggcaggagggatcagggaggataccacggctccccaccaggcggtggcggtgatgcggacgagcaccgccgacgcatcatcaaccttatcgtcgtcggcgccgcggcgctcgcgttcctctccatgatcctcctcgtcgtgatcgtcgccgtccggcggcggaggctgcggcggcggcggcagaggcagcaggcgctcctcgcccccgcggcgccggccgacgcggtggcggtgaacgtcgaggacggcggggatgacgatgcggagggagggggaggaggaggaggaggaggaggagtggtgcaccacatctggtacatccggaccgtcgggctcgacgaggcggcgatcgattcgatcgccgcgacgcggtaccgcgcgggcgctgggctcctcggcgccgccgactgctccgtctgcctcggcgagttccaggacggcgagctggtgcgccttctccccaagtgcggccacgcgttccacgtcccctgcatcgacacgtggctccgcgcccacgtcaactgcccgctctgccgctccgacgtgctaggccccgccgccacggccacggagtccggtggcggcgacaccggctccatgccacaagctgatccagtcgcaaacaccatagccgcagcccagcaagcggctgcgccgggcgatgcaatcttggaacgccaagaagaagaagaggaagcagaacaggaggaccaaggagcgccgccgcacatggaggaaaaccggcaagagcaatccagctcaccggatccattgccgccgccgcgcaacgtgcggcgcgcggcttccatggacgcggcgatcgtgtcgaccgccgcagaggtcgcggcgctagagcggctgccggaggcggctcctgaagaggagcagagcggcggcggcggcggcggcgacaagcgcggcggggctcctggcgcgtcttgcctgaaggtctcgagctccggccgcctgagcaacctcggcgccgccgagaggctcccgaggtcgttcttctcgcggcattgccgtgcccggagctcggtgctcccgctgtgatgagatccctttgctgaattttgctccctgcgaataaggttacaccatgttcttgataagggatcgattagtgtgtaaatattatacttggaatcctaaaaagtgaggattacgagtttgagaccccaaatgcagtaaagagaagtgcttgagatct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0450400, RefSeq:Os04g0450400