Os04g0450900

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0450900| Description = Protein kinase PKN/PRK1, effector domain containing protein| Version = NM_001059478.1 GI:115458685 GeneID:4336001| L...")
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Gene Name

Os04g0450900

Description

Protein kinase PKN/PRK1, effector domain containing protein

Version

NM_001059478.1 GI:115458685 GeneID:4336001

Length

2208 bp

Definition

Oryza sativa Japonica Group Os04g0450900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22865336..22867543

Sequence Coding Region

22865429..22866841

Expression

GEO Profiles:Os04g0450900

Genome Context

<gbrowseImage1> name=NC_008397:22865336..22867543 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22865336..22867543 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcagaaggtgtcggagatggaggaggagctgaggaaggagaaggacgcggcggagaaggtgcaactcttgcagcgggaggtggagaaggccaaggagtcggagcgcaagatgctcgagtcgctaatataccagacgaagcagctggagcagacgaagatctcgctcgaggaggccaagctggagatcaccactctgcagcaagccaacgcgagcctcgaggcctcggcggcggcggcggtggtgagccggcggggtggcgcggtggagcagaggagcgtcaaggacctcgtgttcggcggcggggacgatgagatcagggccctgcgctgcgagctccggacggcgatgcagggggaggagaagagccggaaggcgctcgacgacctgtccgtcgcgctctccgacgtgacgatggaggcgaagcaggtgaagatgtggctgtccgaggcgcaggccgagctggaggccgccaatgccgaggccgagcggctgaggcacgagctggacgccgccgaggcgaggctgcgcgacgtgtccgacgagcacgaccggtgcaggctcgacgccgaggagtgcgccgccgcgtggggcgacaaggagcgcgtgctcctcgactgcgtccgcgcgtccgaggaggaggtgaaccgcgaacgccaggagaacaccaagctcgtcgagtcgcagcgcgtgatccgcgacgagaacgcccggctccgcgacatcctgaagcaggccgtcgccgaggccaacgtcgtcaaggagtcgctggagctcgcccgtggcgagaacgcccggctcaacgacgtcgtcgccgagaaggacggcgcgctgcagagcctccggcaggagtacgagtgcatcaaggtcagcgaggccgccgcgcagggcagcctcaaggagctcaacagcctgctcgccgccacgacgacgacgacggccaccgcgtgcagcaccccggcgtcggcgaggaccgcctccgtggcggactacggcttcgaccagcacctgccgagcgttcgtctcgtctccagcgccaagggcacaccggaggcggcgtcgcaccggtggacggcggcggacaagtccaggacgccgagcagccggaggtactcgatcggcgagcccgccaagttcaagggcggcttctcgcagtcggcgaggatgggcaacctgaaccacaaggaccgggtgttcgcgtcgctgagcaacatcgccgacctcaagtcggcggcggaagccgccatgagcgacttcgacgatgagttcgatcacgtcgacgagagccactacgacagcatggatcaatccatgaagcagaagaagaagaggccgatacttcgcaagttcggggatttgttcaggaggaaaagcttctacaaggcgaatttagcgccagtacacacttga</cdnaseq>

Protein Sequence

<aaseq>MRQKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLESLI YQTKQLEQTKISLEEAKLEITTLQQANASLEASAAAAVVSRRGGAVEQRSVKDLVFGG GDDEIRALRCELRTAMQGEEKSRKALDDLSVALSDVTMEAKQVKMWLSEAQAELEAAN AEAERLRHELDAAEARLRDVSDEHDRCRLDAEECAAAWGDKERVLLDCVRASEEEVNR ERQENTKLVESQRVIRDENARLRDILKQAVAEANVVKESLELARGENARLNDVVAEKD GALQSLRQEYECIKVSEAAAQGSLKELNSLLAATTTTTATACSTPASARTASVADYGF DQHLPSVRLVSSAKGTPEAASHRWTAADKSRTPSSRRYSIGEPAKFKGGFSQSARMGN LNHKDRVFASLSNIADLKSAAEAAMSDFDDEFDHVDESHYDSMDQSMKQKKKRPILRK FGDLFRRKSFYKANLAPVHT</aaseq>

Gene Sequence

<dnaseqindica>703..2115#cggccttcctcgccccgctcgatcgctcgcgacgacgcggataaaaataaaaaaacccagttgagtgagtattaatggcgccatgttgggcagggtcttctaattcggttccctgacacggctgtcgccgcggaaaccgtttctttcttctttttttcctccctccgggggggctccttgcctcggaccacgcgccgcccgcgtgccccgcctccacgctgccgaggtgagtgagagttttcaaagagaggagtggctcgcgctccgctcgagtcggcgtgccacgccatgagcgagagccctcctcctcctcctcaagatccttcttttccggccgtgtctctcttcttttattattgcttgactatttagtggtagtaagtacttccgccgattcgatttcgatatgagctgggattccccctgcagatccggctccttcgaggccggcctccggtcacccgcgcctcctcctcttaccgtttctcccaaggattccaagccgtcccctcgtctccaccgcagccgctccaccgccgccacctccaagcccccgccgtccccgcccccagatgtaaggttacgccacgttaattacgttaccttcaaagcctgtgcccctttttttttcccttttttttgtctctgcttgattttgattgtcgtgttttttttttctggcagaggcgtcgcgacggcgcgatgcggcagaaggtgtcggagatggaggaggagctgaggaaggagaaggacgcggcggagaaggtgcaactcttgcagcgggaggtggagaaggccaaggagtcggagcgcaagatgctcgagtcgctaatataccagacgaagcagctggagcagacgaagatctcgctcgaggaggccaagctggagatcaccactctgcagcaagccaacgcgagcctcgaggcctcggcggcggcggcggtggtgagccggcggggtggcgcggtggagcagaggagcgtcaaggacctcgtgttcggcggcggggacgatgagatcagggccctgcgctgcgagctccggacggcgatgcagggggaggagaagagccggaaggcgctcgacgacctgtccgtcgcgctctccgacgtgacgatggaggcgaagcaggtgaagatgtggctgtccgaggcgcaggccgagctggaggccgccaatgccgaggccgagcggctgaggcacgagctggacgccgccgaggcgaggctgcgcgacgtgtccgacgagcacgaccggtgcaggctcgacgccgaggagtgcgccgccgcgtggggcgacaaggagcgcgtgctcctcgactgcgtccgcgcgtccgaggaggaggtgaaccgcgaacgccaggagaacaccaagctcgtcgagtcgcagcgcgtgatccgcgacgagaacgcccggctccgcgacatcctgaagcaggccgtcgccgaggccaacgtcgtcaaggagtcgctggagctcgcccgtggcgagaacgcccggctcaacgacgtcgtcgccgagaaggacggcgcgctgcagagcctccggcaggagtacgagtgcatcaaggtcagcgaggccgccgcgcagggcagcctcaaggagctcaacagcctgctcgccgccacgacgacgacgacggccaccgcgtgcagcaccccggcgtcggcgaggaccgcctccgtggcggactacggcttcgaccagcacctgccgagcgttcgtctcgtctccagcgccaagggcacaccggaggcggcgtcgcaccggtggacggcggcggacaagtccaggacgccgagcagccggaggtactcgatcggcgagcccgccaagttcaagggcggcttctcgcagtcggcgaggatgggcaacctgaaccacaaggaccgggtgttcgcgtcgctgagcaacatcgccgacctcaagtcggcggcggaagccgccatgagcgacttcgacgatgagttcgatcacgtcgacgagagccactacgacagcatggatcaatccatgaagcagaagaagaagaggccgatacttcgcaagttcggggatttgttcaggaggaaaagcttctacaaggcgaatttagcgccagtacacacttgaaaggaaaaaaaaaaaatctctcccatgtaatgaatgtcaatttgttttgttcttctcaatacacaagaaatgaaatacttttggatccaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0450900, RefSeq:Os04g0450900