Os04g0451100

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0451100| Description = Conserved hypothetical protein| Version = NM_001059480.1 GI:115458689 GeneID:4336003| Length = 7150 bp| Definition ...")
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Gene Name

Os04g0451100

Description

Conserved hypothetical protein

Version

NM_001059480.1 GI:115458689 GeneID:4336003

Length

7150 bp

Definition

Oryza sativa Japonica Group Os04g0451100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22870717..22877866

Sequence Coding Region

22870782..22870925,22873147..22873212,22873303..22873390,22873462..22873615,22873942..22874038
,22874123..22874182,22874298..22874398,22874485..22874566,22874870..22874962
,22875036..22875100,22875513..22875525,22875613..22875693,22876080..22876188
,22876303..22876424

Expression

GEO Profiles:Os04g0451100

Genome Context

<gbrowseImage1> name=NC_008397:22870717..22877866 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22870717..22877866 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgctgctgaagctggagaaggtgcagagggtgctctccctgatgggttcgcgtggcctctccggctccggctccgactccggcgccagcgacggcggcggcggcgaccgattcctcgcccacttcctcctcttcctggtgcaaccgtttgattcacttagcatggagaaaaaagctctattggtctctgacctgttaagaaaggtcaatgttgatactcttgaagaagtgtgccaccttggcagcatagaatgtactagtggtgaaggaaggatcattcctgcttcaacttctgatcaagatatatctttgggagatccactacagccaaataagaagttgaagttgcatgccgagaaactaactgttcaggaggcacctatggttgggtttcatgcaatgaggagagctaattctacgattgaagattttgtgcgtactgttcggtcatatttcatgtttcatggtttagatgtcaacaaagcacaatctattttcaagtttcttcctgttctttgtttcaccgaaagctacatataccagttagatgatttaaatgaatataacttgcagatggtcccaggtaacgatgcttccttaacagtgttggaaagggaaaacagaacttccaatgaagcgtccttgactggcatgctcaatgtccttgacgatcttcttcaacgccaggggctaatgacagatcaattgcgaaatgaactaaagtctggcattcagtattggtctctagagagaaagctttgccaagcattgtcgagaaatgacaagatatcaattgaagatgtgatggaagcaatccatctgaaatcgtttgattaccgagttcttaatctgctgatgtatcgtctaactggtcagcaggttaatgaagtgcatatggagttcttgtcaatttcagagtttttagtggagatatctgatgatctgtatgattatgaggatgatgtgatgaacaatacttttaacatcctccgtatgtttgctgcaatttatggaccttcagaggcaccaaagatgttggccaagtgcataggtgaagctgaggagaaatatgagagattctctaagaaattggatcctaccctctcaggaagttattggagaagatgcgaggaagctacaaaggaaggtggaaaaatgtcaggccatgcatatggcacatggaatatccctcctttgataagagatgaagaatttttccgccttgaaagatcaaacaaacgcgacgcctctgctataaccatcacatga</cdnaseq>

Protein Sequence

<aaseq>MEALLKLEKVQRVLSLMGSRGLSGSGSDSGASDGGGGDRFLAHF LLFLVQPFDSLSMEKKALLVSDLLRKVNVDTLEEVCHLGSIECTSGEGRIIPASTSDQ DISLGDPLQPNKKLKLHAEKLTVQEAPMVGFHAMRRANSTIEDFVRTVRSYFMFHGLD VNKAQSIFKFLPVLCFTESYIYQLDDLNEYNLQMVPGNDASLTVLERENRTSNEASLT GMLNVLDDLLQRQGLMTDQLRNELKSGIQYWSLERKLCQALSRNDKISIEDVMEAIHL KSFDYRVLNLLMYRLTGQQVNEVHMEFLSISEFLVEISDDLYDYEDDVMNNTFNILRM FAAIYGPSEAPKMLAKCIGEAEEKYERFSKKLDPTLSGSYWRRCEEATKEGGKMSGHA YGTWNIPPLIRDEEFFRLERSNKRDASAITIT</aaseq>

Gene Sequence

<dnaseqindica>66..209#2431..2496#2587..2674#2746..2899#3226..3322#3407..3466#3582..3682#3769..3850#4154..4246#4320..4384#4797..4809#4897..4977#5364..5472#5587..5708#aaatccgagacgctgcatcaaacgaaacgaagcgagaagccgagaaggggagagaggggggagcaatggaggcgctgctgaagctggagaaggtgcagagggtgctctccctgatgggttcgcgtggcctctccggctccggctccgactccggcgccagcgacggcggcggcggcgaccgattcctcgcccacttcctcctcttcctggtaagtcgcgtttcccggtcccccgctcctttctccaatagccgcggattccatcagttcgggggtgattgcgcttgtgcggcgggctccggcgagctcgaatcctcgaactgcctgttccacgcgtgcgtaggggtgctcgtttggggctccgatagcacgatgacgagatggcttcttaagaggatttcggttggccgagggtttatgcgcggatcgcatttcatctgcgtcctggactcctgctcgttttgaaggtttggtttgttggggaggggagtaggtaggcgtttgagcatgcgtggtggagtgagaggatttttacttggggaagtgtgagacgtgtgccccgagtttcattgtgtaagacgccgggagtttgtgcaattgcgtgtgactcgcggccaatctgatgcgatggtgcacgctgatgcgcgatcatgtagtgcttgtgaatgtgaagcattctgcttacacgtgctcactgtgtctgatgatttctcactgacaacatatgtgctgctggcctgctgttctagatttggacttccaatatatgaggatctatcacctctggttggattgcaaccaggggcggacgcaggataaaaattgactgggggcatctgtggtatgtaaattatctaacttaactttataacttatatatagcaagttagaaaaccctagtaaattcacctattttgcagatcctacataaaaatgactatgacatattacattactccaaggaagcttgtctgaatcagtacttcagtaggttgaggggcttgaggcattgcaaaattttgtctagttattggttttgatgcatttgcactagattccttccattagtgttcattattgctgttgtttttttattacaaatatatgtcattatcttttcctaccaaatcattgatgagatgttgcattacgatattagtgctaccacaaactagaggagtacggctcaaaattttgaaagacaaaattgctaatgtaaacataaaacataccgtggctacttaccaagggcaactagagagggtttcaggctgcaggtgcaccgggtgaggcttgccgacatggccgcatgggctgtggccatagcccatagagattgtccacgacttgcggcgtgacgcgattggcacggagatgcgttgttgggcagatagcgatggaaggacgccgacatcccgccatccgtggctctcgtgaagcctccaggcggtggtcgcgacggcctccttcggcgctggcacttgcaggctgtgggaaacggcgaactgcgggaagcaccagattttgatggcctcaatcgctccggtaattacgatttgtagattgggatccagggaaggggagcggacggttcgagtcctcaacactgtcctcaccgcacgcacagagattgcaaaggaaggaaaaccagaagagtgggggccttcttgtcaggtgcagtgggggcctattggtaatatgattaggggtatgtgtaatatatgtaaaatttgagtggggtccagggcccccactgctaatacgctaaatctgtccctgattgcaacctcccaataagtccttcagaagaggaaaaaaaaaagatctacaacctgggaaagcacaactcttcattatttttctaaaacaccaactgaaaactaaatttccacatatgctggtttgccaggcttatgttaatcaaattatgttgaaaataatccattgagaaaagttgaaacactagcatgaattcttattatgattactagcagaatgcctgtaccttgttacgggattaaaaacataatcttattgcattgctctagaattattacttcccgttcaataataataggattattaacaacagagtcttattacattggtctaatcccttatagaattatgatgcactcaggaggctgaagccccaaatggcctaatgggagcacttgaattgacctgtgggctccgcttgccagtggtggtggcagactcatgtccaccactactggcttcttttaagattgtatagataatatcatctcagttggtttgcctcttcttttccccattgctatgctgaattgcctgaattcaatgcctcttgctggcatatcagatgcccctactttttgactaagtgcatttggaattatgcttgtaaagtatgatttaaggacaatcctcatctttttcgggttcacaggtgcaaccgtttgattcacttagcatggagaaaaaagctctattggtctctgacctgttaagaaaggtaattttggtgcgctattgctctacttttgatttttcttacttgaaaatgttttctatgctgcatttgtaattgagttctgtttataaggtcaatgttgatactcttgaagaagtgtgccaccttggcagcatagaatgtactagtggtgaaggaaggatcattcctgcttcaacttgtgagttaatctagcaaatatcttgtcaaatgggattgtattccatagagatgacgccccttgaaatgcagctgatcaagatatatctttgggagatccactacagccaaataagaagttgaagttgcatgccgagaaactaactgttcaggaggcacctatggttgggtttcatgcaatgaggagagctaattctacgattgaagattttgtgcgtactgttcggtacctctaacaaccttaattgtcatcagctttctgtaaaactatgtgctagtacttctctattacttttatgaaagctgtcatgggttcgcttgtgccacaaaatgatataactcacttagtgacctaagttcatctttgaacaagataacttaacatggagtatgtcttgccatttcttgaaccacctttcaatgtgatgttatagattttcattgttctcttgcaagcatattttcattcttttgttttattgtggatttcttttagatatttttcttacaactatgagtcgttgacaatatttacttgaaatgacagtgcaggtcatatttcatgtttcatggtttagatgtcaacaaagcacaatctattttcaagtttcttcctgttctttgtttcaccgaaagctacatataccaggtttttgctcaaatgctcacttttttgtccttgacggcttatgttttttttttctctgatcaaattcagcctttcttgttgcagttagatgatttaaatgaatataacttgcagatggtcccaggtaacgatgcttccttaacagtaagtcttggtcatttgacttgattatcctgtgagatgtggggtacaatctatgttgattattggatgatagtttgtacattgactttctaatacactagtgtcactgatgcaggtgttggaaagggaaaacagaacttccaatgaagcgtccttgactggcatgctcaatgtccttgacgatcttcttcaacgccaggggctaatgacagatcagttgggtactcttctatacacctgtaaatatttagaaaatccaccatattttattgagtggtctccttatttttctctgtttttagattgcgaaatgaactaaagtctggcattcagtattggtctctagagagaaagctttgccaagcattgtcgagaaatgacaaggtacttagagccatctcttggatcatctgttcatttatcagggcatcaacagttatatgacaaaagcatcaaagtataccactgaatattgaaaaagcagagactagactaagcaagactgtctctcaggagaattggtatttgagcctagcagttcgcacactatattgtaaaggaactgatgagcaaacaagtttgaaacatgcatttttcattccccttttttgttgaaatacaatgcctttgataacgttttcccctgttctgccagacttaaatacaatgcttattctttctctgtagatatcaattgaagatgtgatggaagcaatccatctgaaatcgtttgattaccgagttcttaatctgctgatgtatcgtctaactggtcagcaggtacatatggctttgactaccaaatcctgctcgtgtttgtctagttaaactctttctctttttatgtttgtaggttaatgaagtgcatatggagttcttgtcaatttcagagtttttagtggagatatctgatgatctgtaagtgtgctctaaatattaatcttgcatgcataactgaatttgtactgcatctacgtagaatagtgcaaactgtttagtttgaagaaatcctctacatgtgatctgctggaggtaatgctcaaggaaaacagtgacgggtgtagagtatatgggagtagaactttaaggcagaaatctgcaagagctgcattatcctgacaaggatgtgtgatatattcaactttaaacagaagtttgttatgaatgaagttttggtttgactgactttcatggtgaaacctaattggtaaatgatataagaaaaacagaaacaacctttaaaatattgaaggtgtgggtgcatttcagaatttacagcataaacattaagcagttgttgcactattgacatgttataattatcttgcaggtatgattatgaggtgaggttttgctaatgcctagttgatattgtcaatgtaccaatgcatgtataactgttatttaaatagtttaaatttctgatgcaggatgatgtgatgaacaatacttttaacatcctccgtatgtttgctgcaatttatggaccttcagaggcaccaaagatgttggtgagtaacaatttatccgtcttcgacctaatggcacttttttattttgacaatactagtgccgtgttcctaatgtttctaattcattaaatatggttcttgttcgtaaaattgtgagtatctaattgcaagaaacttgcagtcaatgtactgatcttcttatctatgaaataataaatagtaagtattgatcttgtttaaactaaaactattcaaccatgtaacattgagagtattgccattgatcaccgccagtttacagaaatttgtcaattatgccaatgagttaaaaatatctagttcccatattgttggtttacaagttattatacataacttcttttttactttgtgatggtaattctttcattgaatggctgctacaggccaagtgcataggtgaagctgaggagaaatatgagagattctctaagaaattggatcctaccctctcaggaagttattggagaagatgcgaggaagctacaaaggaaggtgtgtcttttccacccattttgaacacaataattagtctcttcatctttattttgggtgatattcttttattgatggagtgctaaagcaaccatgcttgttatcatcttgcaggtggaaaaatgtcaggccatgcatatggcacatggaatatccctcctttgataagagatgaagaatttttccgccttgaaagatcaaacaaacgcgacgcctctgctataaccatcacatgacatttaatcccctgagcatgttcatacaaaagcgcaacagatattgctaggtaagtatcttacacatcctgtgtgtgcttaagctctgtccattatctgtaaccttatatgaggtgccatggggtttgcccatctagtatacttcactaaagaaaaaatcatactaggattttgtgtatctctagcctcacaagctgagctcaatttccatcgtgagagttattgctttttgctagctgtttctgtggttcgaattcactcaggctcaatcaagtcaaaatttgctggattatttgtggcccaaactccagtgactcatttcagttcctgcaaattagtaagttgtgaaaatgtgggagtgttctgtggttactgtgcaaccatatagatatattagatgataagaaaatagtttcttgagctggtcaatatgactgtcacacaacttatgttgctccctaggactaagcactaacaaacactttgacatgtttctggacctgtggatgccacacgccagatacattattctctctttttctttaactagttacatgtctgtacattgcaacgggatcacaagatttttttggggtgttttttttttttgggaggaggagcagtttttttgaggagaggttttttataaggagagggaacagtttttttagtgaggaaggagaatgactgctttcaaagtagttaagaaacaatttttcttcatgttacacatcagtatgctaagcattcaacagttcttttttttttattagtatgttagcattagaatataatatatgcagaccctatatgacaacgtctttttggcacatgttagtgttttgccaccttccgtcatgccacaatttgtggattgcgataagatcacgaaatatcttctagatagctgacaagatctatttggcacatgttgtgtttaatcatcttcatgccattattatgctgttacaatcatgacatctatttggttcgcagaactaatcctcataattccccttaaatagatttccttttatacaggggagatatatagcatctgtatgtctcagatgaactatctatcaagctagcacattgcttattcttttctattataatgatcatatacccttaatacttggaggatactctatagagaattgagctaaggtaaacgttcttaggagtgggaattttattctgttttcctttgtttattacgcagatttatcgaaccttcgtgtgttactaaagccagcgagttggataagaaaagaggagtcagcgaacattggtagcatagctctatctgggtgtagtccaatactaatcgttgctcaatgcattctaaaatttcctgtcattttcacgagatttttctgttggttttccttttagtacttatgtcatcggcttgaatgattaattgctgtggtaaccac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0451100, RefSeq:Os04g0451100