Os04g0452100
| Gene Name |
Os04g0452100 |
|---|---|
| Description |
Similar to Cryptochrome 1 |
| Version |
NM_001059485.1 GI:115458699 GeneID:4336008 |
| Length |
5131 bp |
| Definition |
Oryza sativa Japonica Group Os04g0452100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:22948432..22953562 |
| Sequence Coding Region |
22948833..22949190,22950214..22950432,22950706..22951412,22951544..22952362 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:22948432..22953562 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:22948432..22953562 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcggtgtcgtcgtcgtccatgggcggcggcggtggcggggacgccggggggaggacggtggtgtggttcaggagggacctgagggtggaggacaacccggcgctggcggcggcggcgcgcgccggcggggaggtggtgccggcgtacgtgtgggcgcccgaggaggacgggccgtactaccccggccgcgtgtcgcggtggtggctcagccagagcctgaagcacctcgacgcctcgctgcggcggctcggcgccggcaagctggtgacgaggaggtcggccgacgccgtcgtcgcgctgctccagctcgtccgcgacaccggcgccacgcggctcttcttcaaccatctctacgacccgatctcactggtcagggaccaccggctgaaggagatgatggcagcggagggcatcatcgtgcagtctttcaatgcagacctgctgtacgagccgtgggaagttgtcgacgacgaaggccaatctttcaccatgtttgcgcctttctggaataggtgcctcagcatgccgtatgatcctgccgcaccgctgttgcctcctaagagaatcaattcaggtgacttatcaatgtgcccatcagatgatctgatctttgaggatgactcggagaggggaagcaatgcacttcttgcccgagcatggtcaccaggctggcagaatgcagacaaggcactgacagctttcctgaatggtcctttgatccactactcagtgaatcgcaagaaagcagacagtgcaagtacctccctcttatcaccgtacctgcatttcggtgagctgagtgtgcgcaaggtcttccaccttgttcggatgaagcagcttgtgtggagcaatgagggcaatcgtgcagctgaagagagctgcaccctgttccttcggtccattggtctccgggagtactcacggtatctgagtttcaaccacccatgcagccatgagaagccccttttggcacacctcaggttcttcccctgggtgatcaatgagtgctacttcaagatatggcggcagggaaggactggttacccccttgttgatgccggcatgagggagctatgggctacagggtggttgcatgatcgtattcgtgtggtagtgtcaagtttcttcgtcaaagtccttcaactaccatggcgatgggggatgaagtacttttgggacacattattagacgcagatcttgagagcgatgcactaggctggcagtatatctctggctctcttcctgatggccgagaacttgaccgcattgacaatcctcagctcgaaggctacaagtttgatccgcatggtgagtatgtccgaaggtggcttccggagcttgcaaggttgccaacagaatggatacaccatccatgggatgcacccgcatctgtgctgcaagctgcaggagtcgagttaggctccaactaccctctccctatagttgggctagatgcagccaacgccaggctgcaagaagccctgtcagaaatgtggcagcttgaggcagcatccagggccgcaatggacaatggaatggaagaaggccttggcgactcctcggaggttccaccaattgaatttcctcgagaactacagatggaagttgaccgagaaccagctcgagtaacagccaatgtgctgacaacagctcgaagacgcgaggatcagatggtgccaacaatgacatcttcactaaacagggctgaaactgagatttctgccgattttatgaacagtgtggacagtagggcagaggtaccaacccgtgtgaattttgagcctcgaactgagcgggaagaaaatttccgtaccactgcgggaaatgttgctagaacaaatggtattcatgagcacaataatttccagcaacctcagcaccgtatgcgaaatgttctagcaccatctgtatcagaggcatcaagtggctggactgggagagagggaggcgtagtcccagtttggtcgcctcctgcagcatcagaccattcagaaacttttgcctctgatgaagctgacatttctagtaggagttatttggataggcatccacagtcgcaccggttgatgaactggagtcaattatcccagtcattgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MSVSSSSMGGGGGGDAGGRTVVWFRRDLRVEDNPALAAAARAGG EVVPAYVWAPEEDGPYYPGRVSRWWLSQSLKHLDASLRRLGAGKLVTRRSADAVVALL QLVRDTGATRLFFNHLYDPISLVRDHRLKEMMAAEGIIVQSFNADLLYEPWEVVDDEG QSFTMFAPFWNRCLSMPYDPAAPLLPPKRINSGDLSMCPSDDLIFEDDSERGSNALLA RAWSPGWQNADKALTAFLNGPLIHYSVNRKKADSASTSLLSPYLHFGELSVRKVFHLV RMKQLVWSNEGNRAAEESCTLFLRSIGLREYSRYLSFNHPCSHEKPLLAHLRFFPWVI NECYFKIWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYF WDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQLEGYKFDPHGEYVRRWLPELAR LPTEWIHHPWDAPASVLQAAGVELGSNYPLPIVGLDAANARLQEALSEMWQLEAASRA AMDNGMEEGLGDSSEVPPIEFPRELQMEVDREPARVTANVLTTARRREDQMVPTMTSS LNRAETEISADFMNSVDSRAEVPTRVNFEPRTEREENFRTTAGNVARTNGIHEHNNFQ QPQHRMRNVLAPSVSEASSGWTGREGGVVPVWSPPAASDHSETFASDEADISSRSYLD RHPQSHRLMNWSQLSQSL</aaseq> |
| Gene Sequence |
<dnaseqindica>402..759#1783..2001#2275..2981#3113..3931#caacctctctctccattggactagaaacgccaactgcaagaacacccaacaccaaacaaagaccggccaaaattttatacaccggaaaatacacgggaaaagaaaggaagagaaaaaaaaaggaggcgcctttgctgctttgcagttgcagagcagctcgcgccgcgcgcgtacactcgctttgctttgcttcttcgccggaaaaaacccaatccaatcaagcggagctcgagctccaatccagctatagttgggaatctcgaggggggaaggaggaagaagaagaagaagaagcagtgagctttggagtttgagctggctagctccatgcttcgggtgacgtcctcttgatccaagaactcgtgggggggttggttcttggattggattgggtgcatatcatgtcggtgtcgtcgtcgtccatgggcggcggcggtggcggggacgccggggggaggacggtggtgtggttcaggagggacctgagggtggaggacaacccggcgctggcggcggcggcgcgcgccggcggggaggtggtgccggcgtacgtgtgggcgcccgaggaggacgggccgtactaccccggccgcgtgtcgcggtggtggctcagccagagcctgaagcacctcgacgcctcgctgcggcggctcggcgccggcaagctggtgacgaggaggtcggccgacgccgtcgtcgcgctgctccagctcgtccgcgacaccggcgccacgcggctcttcttcaaccatctctacggtttgcttttgctagctttgtgctttttttattattatttttatacaagaaaaggagatatgccttttagattgtttctggcatcaaagtcttcacatgtggcaaatctttctgttagatatgttgatcgaatctcatggcaagtccatgcttttaggggcaattctagcttgaagttatgatttgattggatgacatgataacaatgcaacttctctgtttcgcttgcatcttcattacagttttcatcagattcgcgtcaagtttgagctagatctactccatcattttaacagtattatgtggcactacttggatatattaatatactacacctccatctccatggtccacatgccaactatgttccagtttagctaccattgttttagagcaaaacttcagaagttcccagttttagtaatctgcctttacactttgatcattaagaacatttcgccatctactagtactacctttttattatttctgaaagctcttgctgccaccaaccgactaatttaaagaggcaataatcatatgaggagatcaatgtcgtgttggattttcctctttgtagtcttaccccccaacctatataaggtgggcagggagcccttcaagctaagccacaatcagatcgtcagattaatacaacacccatataatccttgaaacaggagtagggtattacttctaattgagaaggcctaaacctgtctaaacctttgtccctttactcatccactttaggtctcatgcgctaccccatttcttgttgccgatttctagaatcaacatcaaccaaccaatttaaagaggcaataatcacatgccagctccatatttagttaacactcattcactcaacataagcacttgtacggttgtactttctagtatattgtctaaaattcagtatctatcaattgttcgtgttgagactagaggtttatgctttgtaaccttgacactcatgacctcgcataactctatactcattggtcacggctgtcttttcagacccgatctcactggtcagggaccaccggctgaaggagatgatggcagcggagggcatcatcgtgcagtctttcaatgcagacctgctgtacgagccgtgggaagttgtcgacgacgaaggccaatctttcaccatgtttgcgcctttctggaataggtgcctcagcatgccgtatgatcctgccgcaccgctgttgcctcctaagagaatcaattcaggtacttggagaattaaattcaaatggtttagtttctacttattcagaaaaaatgtattggttactggcatattaggcactggtattgttcttgcatcagagtaagaacatttcaactgtttgaatgttctgcctttctgtttttacttgctatatatgggcaaattttagctattaatcactaatacttttttggtacataacaatattttgtttctaacactgcactacaagttgaaacagttcggtcaattcactgataaattttcaacaggtgacttatcaatgtgcccatcagatgatctgatctttgaggatgactcggagaggggaagcaatgcacttcttgcccgagcatggtcaccaggctggcagaatgcagacaaggcactgacagctttcctgaatggtcctttgatccactactcagtgaatcgcaagaaagcagacagtgcaagtacctccctcttatcaccgtacctgcatttcggtgagctgagtgtgcgcaaggtcttccaccttgttcggatgaagcagcttgtgtggagcaatgagggcaatcgtgcagctgaagagagctgcaccctgttccttcggtccattggtctccgggagtactcacggtatctgagtttcaaccacccatgcagccatgagaagccccttttggcacacctcaggttcttcccctgggtgatcaatgagtgctacttcaagatatggcggcagggaaggactggttacccccttgttgatgccggcatgagggagctatgggctacagggtggttgcatgatcgtattcgtgtggtagtgtcaagtttcttcgtcaaagtccttcaactaccatggcgatgggggatgaagtacttttgggacacattattagacgcagatcttgagagcgatgcactaggctggcagtatatctctggctctcttcctgatggccgagaacttgaccgcattgacaatcctcaggtaggtcaaactattaattattatctaaagaaaaagtcaaactattaatttcagaagaaaatgcaatccagtgataacaaaagtttctgaatattgatgcattatcttgtgaatccaattgtgcattgcagctcgaaggctacaagtttgatccgcatggtgagtatgtccgaaggtggcttccggagcttgcaaggttgccaacagaatggatacaccatccatgggatgcacccgcatctgtgctgcaagctgcaggagtcgagttaggctccaactaccctctccctatagttgggctagatgcagccaacgccaggctgcaagaagccctgtcagaaatgtggcagcttgaggcagcatccagggccgcaatggacaatggaatggaagaaggccttggcgactcctcggaggttccaccaattgaatttcctcgagaactacagatggaagttgaccgagaaccagctcgagtaacagccaatgtgctgacaacagctcgaagacgcgaggatcagatggtgccaacaatgacatcttcactaaacagggctgaaactgagatttctgccgattttatgaacagtgtggacagtagggcagaggtaccaacccgtgtgaattttgagcctcgaactgagcgggaagaaaatttccgtaccactgcgggaaatgttgctagaacaaatggtattcatgagcacaataatttccagcaacctcagcaccgtatgcgaaatgttctagcaccatctgtatcagaggcatcaagtggctggactgggagagagggaggcgtagtcccagtttggtcgcctcctgcagcatcagaccattcagaaacttttgcctctgatgaagctgacatttctagtaggagttatttggataggcatccacagtcgcaccggttgatgaactggagtcaattatcccagtcattgtgagttcagatgcacggtaactgattggtctcagtaagttgaattgatgttgcacttgctcacaattttgcaacactttatcatagtatggaaacttctcgcataataccaatatagtatctaaaaaatgtttgttttatgcatgaagccacacaagattatgaatggctggacaacttttgatcttgttttcatttttcgtggctagacaacttgttttatcttgttttctgtatatatgtatttgtatttaacttttatttatttatatatacacgctgtaggagcctctcctacagtaattttcctaacaaagaaatattacaatcatgtatgtagacctataaacaaaaaggtcattagaaattgaaaggtagcttcttgggtatattgtatgaccatgtaaaagcctgagtcctatggaaattgacatataaaggaacgaggtctattttacctaaactttgaccaagacatttcccccctcattttattaccagaattactacctaacatttcacatttatgtcaactctcttctatctattctcctccctctatagattcttttgcggcgtataaaaatcttattctatgttattcttgcatgataacatccacatctcatcagggattcacaagcctgcagacaccgcttctgtacaagccgattacttggctttagttatatattatatagtccaacttttggttgtacaagccgattacttggctttagttatatattatatagtccaacttttggttgccttcaactaactgttcactaaaatataagattgatgtgccaacatttctaacatcatctaatattttatgaatcttggattgcaggacaacaggtcgggaagtggaaaattccatgcaaccaaattggatcggttagggttttctccgccccagattcatatgtaaattgtccacctatgtgcttatctatagtctgatgagcatgcaagccaggcaatttcctgagtgtgacaatagttgtgtaaatctaatcctgtagaacctattctgttgtaacagcattgttagagttggctgaaagggatatgtaatattgatcagacaacgagggttttcctagtgtcacgcgtatagtatttttagggggagtcttgtctatacctgtacattcccttgtgctattggcaatctattatcactacttttgtgttg</dnaseqindica> |
| External Link(s) |
