Os04g0453200

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0453200| Description = Similar to Monosaccharide transporter 1| Version = NM_001059490.1 GI:115458709 GeneID:4336013| Length = 8093 bp| De...")
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Gene Name

Os04g0453200

Description

Similar to Monosaccharide transporter 1

Version

NM_001059490.1 GI:115458709 GeneID:4336013

Length

8093 bp

Definition

Oryza sativa Japonica Group Os04g0453200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23010453..23018545

Sequence Coding Region

23010683..23010803,23016421..23016740,23016871..23017503,23017597..23018046

Expression

GEO Profiles:Os04g0453200

Genome Context

<gbrowseImage1> name=NC_008397:23010453..23018545 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23010453..23018545 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcagggacagaggcggcgcgggactacggcggcggcgtgacggccagcgtcgtggtgacctgcctcatcgccgcctcctgcggcctcatcttcggttacgacattggcgtctcaggtggtgtgacgcagatgcaatcgttcctgaccaagttcttcccggaggtggtgaaggggatgcgtggcgcgaagcgggacgcctactgcaggtacgacaaccaggtcctgacggcgttcacctcgtcgctgtacatcgccggcgcggtggcgtcgctggtggcgagccgggtgaccaggatggtgggccgccaggccatcatgctgaccggcggcgccctcttcctcgccggctccgccttcaacgctggcgccgtcaacatcgccatgctcatcatcggccgcattctgctcggcgtcggcgtcggcttcaccacgcaggcggctccgctgtatctcgccgagacagcgccggcgaggtggcgcggggcgttcaccgccgcgtaccatatcttcctcgtcatcggcacggtggccgcgacggccgccaactacttcacggaccgaatcccgggctgggggtggcgcgtctcgctgggcctcgcggcggtgccggccacggtcatcgtggtgggcgcgctcttcgtcccggacacgcccgctagcctcgtcctgcgcgggcacacggagaaggcccgcgcgtcgctccagcgcgtccgcggcgcggacgccgacgtcgacgccgagttcaaggacatcatccgcgccgtcgaggaggcgcggcggaacgacgagggcgcgttccggaggctgcgtggccgtgggtaccggcactacctggtgatggtggtggccatcccgacattcttcgacctcaccggcatggtcgtcatcgccgtcttctcgccggtgctgttccggacgctcgggttcaacagccagagggccatccttgcctccatcgtacttaccctcgtcaacttgtgcgccgtcgtcgtgtcttccttcaccgtcgaccgcgtcggccgcaggttcttgttcctcgccggcggcaccgccatgctcctctgccaggtggcggtggcgtggatactggcggagcatctcgggaggagccacgcggcggcgacgatggcgaagagctacgcggcgggggtggtggcgctgatgtgcgtgtacacggcgagcctcggcctgtcatggggaccgctcaagtgggtggtgccgagcgagatctacccggtggaggtccggtcggcggggcaggcgctgggcctgtccgtctcgctcacgctctccttcgcgcagacgcaggtgttcatgtccatgctctgcgccatgaagtacgccatcttcctcttctacgccggctgggtcctcgccatgacggccttcatcgcgctgttcctcccggagaccaagggcgtcccactggaggccatgcgcgcggtgtgggcgaagcactggtactggaagcggttcgccatggacgccaagctggacgcccaagtgaactgcctctaa</cdnaseq>

Protein Sequence

<aaseq>MAAGTEAARDYGGGVTASVVVTCLIAASCGLIFGYDIGVSGGVT QMQSFLTKFFPEVVKGMRGAKRDAYCRYDNQVLTAFTSSLYIAGAVASLVASRVTRMV GRQAIMLTGGALFLAGSAFNAGAVNIAMLIIGRILLGVGVGFTTQAAPLYLAETAPAR WRGAFTAAYHIFLVIGTVAATAANYFTDRIPGWGWRVSLGLAAVPATVIVVGALFVPD TPASLVLRGHTEKARASLQRVRGADADVDAEFKDIIRAVEEARRNDEGAFRRLRGRGY RHYLVMVVAIPTFFDLTGMVVIAVFSPVLFRTLGFNSQRAILASIVLTLVNLCAVVVS SFTVDRVGRRFLFLAGGTAMLLCQVAVAWILAEHLGRSHAAATMAKSYAAGVVALMCV YTASLGLSWGPLKWVVPSEIYPVEVRSAGQALGLSVSLTLSFAQTQVFMSMLCAMKYA IFLFYAGWVLAMTAFIALFLPETKGVPLEAMRAVWAKHWYWKRFAMDAKLDAQVNCL</aaseq>

Gene Sequence

<dnaseqindica>231..351#5969..6288#6419..7051#7145..7594#gtgtagagttcagaagctcctttgctgagacagatttccgagtagccggcgaacgctttgccttgctcgctgtgtagctagcggagggcttggagcgatcgagcgatcgagcgcgtttgcacggggctaagcgtggaggagaggccggtggtgagccagcagctgtgcaggcagccaggcaggcagcaagctagcggccggctagtcgatcgcgcgcggctccccgcgcaatggcggcagggacagaggcggcgcgggactacggcggcggcgtgacggccagcgtcgtggtgacctgcctcatcgccgcctcctgcggcctcatcttcggttacgacattggcgtctcaggtatagtagctgcctccctcttctcatcgtatattctctgcgaatccgagttgatcaactaggtagaaatcaacctcttgcgcgtctcacccgggctccggccggtaaaacactaaaattttcgaataatcaggtgcggttcggttgggtcgggggtagggcagtagcattttcttgtaatttcgatgaaaggggatgggtagcgctgtaattagttttggagcgaagctgcgaagcgatgtttttgccgctccatctcgatagtataattttttggagcgattcaccccgctccgctctattttttggtggatctatcgtttggcacagctccagctctagataagttggggctgggagctagacctatgttaaacggggcgttaatcaaaacacacaaaaaaaaaatcctcatgtttgactgctccagcagcatgtttgttgatcttcgaaagaaagacgcattcatcaagcatatatcttattcttcctcaccagctgccttgatttactgacacagtaccctgatatgctaatgggccagactaggttggttggttgggaccaccgaaccatcctaggcaagtactattctgttttgggatttgggttgtggaaaaagccagatttaattatgtggcgctaaaagaaatacttgcccttcacataattttggaggccgggtttgtggcattttgcctttaacgtactgtcatgaggttcattttatcagcatttgggttccaataattaaggccatgattccaaaccaacaaaggaattacttcttccccttccaaagttagtgggtgataatatggtgtcacgccccgaactagtcccgaccgggactagcccgtgacgctccaaattaacctgttaatcgataccagtcccagaaaacagtgctggtatcacaggaagacagaatatcacagcaacagaggtctctttattatagagtaggggtacagtcatgttgggctgcggacagatcccgagcttacaactgcattacaaaagggaagcggaagccaagacttggaccaaacatcacaggcgcgacttggggactaggccgaaaccctaaaactcatcgtagccggcttgctcctggaagaactcctcgtcagcgggatccgcttcatcttcttcagcaactgggggggttatttatatagagcaagggtgagtacaggagtactcagcaagccatgggaaataagtgtttaatgcaggcttcaaagaaagactattgtttttgcaattgattttatttgaactcttttctgaaacaacgaagtgagtgcttctcaaacgacacggatgagacagtgcgtctcgtccggtcggagtatgtgcaatgtttcagtcttttgaattgatcaagattggcatccggccaacagctttcaaacggccacccgggcctggctgatcccatcagccgcagattttccaaacatcaaacccattccacaacagcaaatttcacaaggcagtagtcaaacaaaactacgctaggaatcacctcacatccgcccatgaccgtgggcacggctgttcgaacagttttaataacctctgcagagggggtacactttacccacacgacattactaacccggatcatccagcccgtgcagaacggccacgactagagaccttaaggctttcatgacaaggcatttcgaaagccgacacaggttcaccatatgccaacgagaggggtcccagaccaacaccagattaggtcccagaccatactgtgccaggaagcccaggggtcctccccgataccaccccggcgaatccacatgtctcttagtatcaaggttcccccgataagctagttactcagccaggggtgtcccattccacccatgtggtcgtacttgtcttatgttcggaggagatggattgaggagggagaacggggagatgcgctatcgtgcggacggggcgcagtgacgatgggccgacggcacgggagtgatctctccggccttgggccagggaagaggaggaagacgagctcccggagtccccttccgcgtccacgaacgcaccggctctcccggtgcttggcgatggacggcggaggcgagatagaggggcggcaaaggcgcggtggcggcgagcgaaacgggaggaggaattgatgggagggcgccttggtttataggacgacgatgtcggtttggaaaccgaccttgggcggtcaaggcgcgagctggcgctcggcgctcgcggccaaaacggtgacagagacggatgacgccggcggggaggggaaaaggaaaaaaggaagggagaaagggagcttgccccttgcctctttggggaaaaggaggagggagcgagggcgacgcggcagagggaggaggagctctgcctccgtcccttggaggctagcgcgtggagtggcggaggccgggtcgtgacgacggcgatgacggccgggcggtttggagcggagcgacgacacgggcggcaggcgcggcaggcgctgacggcggcggcgactggccggtcggccaccatggcgcgcgcgcgcgggaagcaacgggcggcgcagcgatttgggcggcgtcggcgggaaacggcagcgagggcggagggcgctcggctcggcgcggctcacgcgcacgcgtgcgcagcgcacgggcagagcgggggagagggagagagagagagagagagagccggggagggagggggagatgggccaagaaggattcggcccattgaacccgagggaggcgaaatagacttttgtggagggatttgatttgggaaggatttggattcgggatgaactcgatgatagatcgaggatttgagatctgagatggcacggacactagacaacaagcaaagaaacagatttcgcaattaggatttttaagagatagttttcccgctaggcgtcacgacggaacgggcgctacatatgggtgggtttagttcacaccaaaattaaaagtttggttaaaattaaaacgatgtgatggaaaagttgaaagtttgaagaaaaattttggaactaaactcggccatgtagtgtaggtatcgaatacttctgttgtttgattggtcgatcaaaaggtagatactaggttacccagaattcttctgtcgcgttcgcgaaaaataaacccagaattcttttgtcagagatgggcacacagttctacgttttccttcgcgccacaggcagctttagaactcatttgatatagaggatttataggaatttttgcgtaaattgaactgcttcttgtgaaatttatgtaaaattttatccttccgaaaggtcgaaaggagcccttatattgaataccgtagatatttggattgaaatcaatttctatttaaaaccattttcgctcctagctagaaacatctccatcctcctaaatttagtagcgccgcctaaagttttatcaagatatatagagaataaacttatcctttcagttggccttttgttagttggaaaaattgctctctagttatatatgatgtagatgtcatcgctgacttggtggataaggtgctcaattgtttgttcttattaatagttccatttgatacagagtctgatgcaaggaatattgtattatcagagtcactacatagtacatatctgggaatcaaatttgacttagctttaaaaaatccacaccatatatattgtctacaagataaagcaagatttagctaaaatattgtacaggtcaaaaataatcttggacatattcattagcaatttttttaagatcacagattttttttaaaaaaaagaaattgttttgtcatggagagctccaagcctccaaaaactagctaggctgtccttgagaggctacgatgcttgccagctgagcctgagtacctgttattttcaccgttgctagtgatcgaccgatcgcttgatagctctagctctagctagaatcttattccaatcgaatttgatcgagtttcattatgttgcttaacacggaagctaacaaggatatgtcaaaagcaccaacacattttgccaaaaaagcatgtagggaatcagatctgcagcaatgcttcagggacgtaattaacaccacaaattattcactagattattgaagcagattatttgctgatcactcgttttaagtcatcttttaagtttgtttttttctaaaacatctaatttatcaagtaaataatccgtcacaataatccgctaaacaatccgaaaggaaaacgacctaagctaggcacttcacaattatattagcaaacgcagccaaagtccactgaaagagttacccgatcgaaaagccacacgctagctgcccaaagtggatagagtatatatgaacgtgcagaggccagggcccaggggaacatgtgtgcactacttgcactcatgcaacctatcgaagtgctgtgtacaagtgcttagtggcagtgctcacacaaccagcggacttgtctagctgtgagatcaatcagcaagtagtagtaagttgctatgcttagggcctgtttagttggtaaaataaaaatttttagttgttacatcggacgtttgatcgaatgttgaaaggggttttcggacacgaatgaaaaaactaatttcataacttgtctggaaaccgcgagacgaatcttttgaacctaattaatccgtcattagcacatgtgagttattatagcacctatgactaatcatagactaattaggttcaaaagattcgtctcgcgatttacatgcaaacaatgcaattagtttttatttttatctatatttaatgttccatacatatgttcgaagatttgatgtgatatttttagaaaaaaattctggaactaaacaagccgtagtagtagttgctctgcttgacttgtttctgtccactgacttgggaggacacctttctttttttttacctttgtgtaaaaaggaaaggcaaaaaaaaggcacaattgacttctgacgggcatgattggaaatgacctgagaaatgaattagaataagcacatgtggcatccattactgtttatctagtgggtagtcaacaccgaatatgtcaaatcgacagtacatatatgatgtacactgatgaaatcggcagatgtgtgaattttttttaaccttttcaatttttaataaaagtaaatctttccaaaatttgaaagggctagccgtgaccaaaaggttcatatttcggaaataaattttggaagggcctatttttaaaattaaaactgaaaagttaaaaaaaaagtccagatgtgtgtacgctagcttgcagatacgtatgaagtttgaaaaagacccaaaagatccatccgtgattgacgggtactatatatatcacaaaaattcaaccagcagttaaacaaatcatacaaggactctcgtgtggtaaccgtgatatatttatgatagagatgatggttgacaatcgtgtagtagcaaataaaactaatggtcagaatttccattttcggccgacgatatccgtgcatcaccatgactgttacaaaatacaaatggtcaacaacttctactgttgtgccgacgacattttctctctctctctctctctctctgttgcacaggtggtgtgacgcagatgcaatcgttcctgaccaagttcttcccggaggtggtgaaggggatgcgtggcgcgaagcgggacgcctactgcaggtacgacaaccaggtcctgacggcgttcacctcgtcgctgtacatcgccggcgcggtggcgtcgctggtggcgagccgggtgaccaggatggtgggccgccaggccatcatgctgaccggcggcgccctcttcctcgccggctccgccttcaacgctggcgccgtcaacatcgccatgctcatcatcggccgcattctgctcggcgtcggcgtcggcttcaccacgcaggtcgcggcccatttaaatttagcccaacaaatatatcaggcttagacttggcccaacccactaagataaacttattgaggcccaccatattaaatgggcccatttggaaaaaattgcttttgcgtcgcaggcggctccgctgtatctcgccgagacagcgccggcgaggtggcgcggggcgttcaccgccgcgtaccatatcttcctcgtcatcggcacggtggccgcgacggccgccaactacttcacggaccgaatcccgggctgggggtggcgcgtctcgctgggcctcgcggcggtgccggccacggtcatcgtggtgggcgcgctcttcgtcccggacacgcccgctagcctcgtcctgcgcgggcacacggagaaggcccgcgcgtcgctccagcgcgtccgcggcgcggacgccgacgtcgacgccgagttcaaggacatcatccgcgccgtcgaggaggcgcggcggaacgacgagggcgcgttccggaggctgcgtggccgtgggtaccggcactacctggtgatggtggtggccatcccgacattcttcgacctcaccggcatggtcgtcatcgccgtcttctcgccggtgctgttccggacgctcgggttcaacagccagagggccatccttgcctccatcgtacttaccctcgtcaacttgtgcgccgtcgtcgtgtcttccttcaccgtcgaccgcgtcggccgcaggttcttgttcctcgccggcggcaccgccatgctcctctgccaggtagtaccatgcaactcactctccattgttacgtcacaagtttcagatagttttaattaacttttaaaccgtgtgtgactaaaatcaatcaaggtggcggtggcgtggatactggcggagcatctcgggaggagccacgcggcggcgacgatggcgaagagctacgcggcgggggtggtggcgctgatgtgcgtgtacacggcgagcctcggcctgtcatggggaccgctcaagtgggtggtgccgagcgagatctacccggtggaggtccggtcggcggggcaggcgctgggcctgtccgtctcgctcacgctctccttcgcgcagacgcaggtgttcatgtccatgctctgcgccatgaagtacgccatcttcctcttctacgccggctgggtcctcgccatgacggccttcatcgcgctgttcctcccggagaccaagggcgtcccactggaggccatgcgcgcggtgtgggcgaagcactggtactggaagcggttcgccatggacgccaagctggacgcccaagtgaactgcctctaagactgtcattgttacagcggtgtgcgcgcgcggaaaacgattctaaactctcgacgagacatccctgtgtctatatggtatcaaaacagttatgaaaattttaacttgcatgcatgccatctaagaaacgagggacttttccaggagagtttagaagaattcagtgtgtgcgagctcatccatgtcttggttggcatgcagcttatgtgtcagtgtgacagtgtgtgacttcattgttctgctgaaatcttcaaactgtggtttcggttgacaagcatgcatgtggtaaacaatgtgtcaagttgtaaacagatatagcttatggccaactgaacatgtcggcgtgagttggcaataagagcgtccatggagtgtacaccaaccagctagatgcgtgtttgcatgtttttgttgattgattaatctgtaaagggaaagaaggagatgaatgttgttgattaaagattgctcaatgatcatgggttgtgtattgacttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0453200, RefSeq:Os04g0453200