Os04g0453400

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0453400| Description = Similar to Monosaccharide transporter 1| Version = NM_001059492.1 GI:115458713 GeneID:4336015| Length = 5073 bp| De...")
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Gene Name

Os04g0453400

Description

Similar to Monosaccharide transporter 1

Version

NM_001059492.1 GI:115458713 GeneID:4336015

Length

5073 bp

Definition

Oryza sativa Japonica Group Os04g0453400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23026734..23031806

Sequence Coding Region

23026918..23027352,23027441..23028393,23031594..23031744

Expression

GEO Profiles:Os04g0453400

Genome Context

<gbrowseImage1> name=NC_008397:23026734..23031806 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23026734..23031806 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccggcggctccctcctcaatagcggcggcatggcggactacggcggcggtggcggcagcggcggcggcctcacgttcccggtcgtggttacctgcctcatggcggcctccggtggcctcatcttcggctacgacattggcatctcaggtggtgtgtcggagatggagtcattcctggagaagttcttcccgggcttgctgaaggggacggcgcacgcgagcaaggacgtgtactgcatctacaacagccaggcgctcacggcgttcacctcgtcgctgtacgcgttcggcatggtcgggacgctggtggcgagccgcgtcacccggcggaccggacggcaggccgtcatgctgatcgggggcagcatgttcctggtcggcgcgctcgtgaacgccgccgcggtcaacattgccatgctcatcatcgggaggatgctgcttggcctggggctcgggttctcgggccaggccacgccggtgtacctcgccgagatgtcgccgccgcggtggcgcggcgggttcatctccggcttcccgctgttcatcagcgtcgggtacctcatcgccaacctgatcaactacggcacgtcgcggatccccgtgtggggatggcgcctgtcgctcggcctcgcggcgttcccggccgccgtcatggtggccggcgcggcgttcatcccggacacgccgagcagcctggtcctgcgcgggaagcacgacctcgcccgcgccgcgctccagcgggtgcgcggcaagggcgtcgacgtcgacgccgagttcaacgacatcctcgccgccgtggagcacgaccgcaggaacgacgagggcgcgttccggcggatcctgcggcgcgagtaccggccgtacctggtcatggccatcgcgttcccggtgttcctcaacctcaccggcgtggccgtcacggccttcttctccccgatactgttccgcacagtcgggttcgagagcgatgccgcgctgatgggcgccgtcattctcggcctcatgaacatcttcggcatcgtcggctcgggcttcgccatggaccgctacggccggaggctgctcttcatgatcggcggcgcgctcatgttcacctgccaggtggcaatggcgagcatcgtggggtcgcagctggggcacgggagcaagatggcgaaggggtacgcggtgacggtgctggtgatgacgtgcgccttctcggcgagcttcagctggtcgtggggggcgctgtactgggccatccccggcgagatctacccggtggaggtcaggtcggcggggcagggcgtggcggtggcgctcaacctgggcctcaacttcgtgcaggcgcagtgcttcctcgccatgctctgctgcttcaagtacggcaccttcctcttctacgcgtcgtggctcgtcgtcatgaccgccttcgccgtcgccttcgtgccggagaccaagggcgtgccgctcgagtccatgggccacgtcttcgcgcgccactggtactggggcaggttcgtcaaggaccacaagttcggcgacgtgtcgacctaa</cdnaseq>

Protein Sequence

<aaseq>MPGGSLLNSGGMADYGGGGGSGGGLTFPVVVTCLMAASGGLIFG YDIGISGGVSEMESFLEKFFPGLLKGTAHASKDVYCIYNSQALTAFTSSLYAFGMVGT LVASRVTRRTGRQAVMLIGGSMFLVGALVNAAAVNIAMLIIGRMLLGLGLGFSGQATP VYLAEMSPPRWRGGFISGFPLFISVGYLIANLINYGTSRIPVWGWRLSLGLAAFPAAV MVAGAAFIPDTPSSLVLRGKHDLARAALQRVRGKGVDVDAEFNDILAAVEHDRRNDEG AFRRILRREYRPYLVMAIAFPVFLNLTGVAVTAFFSPILFRTVGFESDAALMGAVILG LMNIFGIVGSGFAMDRYGRRLLFMIGGALMFTCQVAMASIVGSQLGHGSKMAKGYAVT VLVMTCAFSASFSWSWGALYWAIPGEIYPVEVRSAGQGVAVALNLGLNFVQAQCFLAM LCCFKYGTFLFYASWLVVMTAFAVAFVPETKGVPLESMGHVFARHWYWGRFVKDHKFG DVST</aaseq>

Gene Sequence

<dnaseqindica>4455..4889#3414..4366#63..213#atcaggcatcagcagcagcagcagcaacaacatttggccgctctgaagattggtgacggagaatgcccggcggctccctcctcaatagcggcggcatggcggactacggcggcggtggcggcagcggcggcggcctcacgttcccggtcgtggttacctgcctcatggcggcctccggtggcctcatcttcggctacgacattggcatctcaggtgcgctggagatggatcggattcgatcgatcgcttactttgcaattgcatgcggtttgggggtgctcttttctgaaaatttttctgaatgtttaattccgtggttttctttttttcttcttcttctgaaatctctgcacacgtatcgcgtaggattcgatttgatttaccactcattttagtcggtgattctcccaatccatcatatctcccctcatcacgacctcgacgacaacgatacgattctcctgtggcttgtggctagcccactttgaggacttgattcctgggtctctcaagtcactcgctacaagccaagaccattttcctttgatctgaagcggccatggccgagccgcatctcaactgctgccctgtgccccccttggtttctttattccgtttctgcttcttccacggcagattcccaacacatggagtagtccaaatctggcctcagtttttaataatctaaaaaaaaatcagcgcgcaggtgtaagcatcacgcgagcgaacaaatctaatccaatcaaactggtgaattttacaacagaggaagaggatattttttttctattcttgagaagattcacgggagaacaattagttctcgtgtgatatttccgcgttcattcaaatcaaagcccagagaggccgaagaggacgcagctcttgttctctcgtcaaaccgaacgtacagcagctgctgattaaccgggcacatcacagaagaaaatccaggaagtagatatctttcgaggaagcgtgatccgagccgcgcgttagccatcggacggccaggaggggatagaggcggaggtggggccccacctggcagatccttacacgtgggcccgttcacctgcttgggcgggaccaggtgaggcgacacaatccggtcgaattggatggccacactgcggcggcggggccagcgagcggccggtgtacggcctacccatcttctcgtggagcgccattagacacgtcaggttggttacagttaaacctttagagcccataagtatgtccgttgactctctttccatcgtgaggctgttaagtgtgattggttcctaactatattttaccacgtttttaaatattgttagtacttgtttaagttgagataattaaattctgagtcccacattaacaagtctaagataatcttgtcacactttcttgattcattaacgtgtgggacttgatttattaaaagtgaattttgccacaattatgatcaaacttatctaatcttagacatgataaactgtggtaaaatgtggctgacaaccaaacataattttagaatcagagctttactgagccaaaaatcaaagtcatttttagaattgaggggtacctgagatatttttagatgagtgagattttttttttagggaagatagtgagattttattttgagcagcacatttttttttctattcccacatagcagcagtaatcttcttgggaattaccactttctgtatttcaaagttttaagcccgtttgaaacgcaaaattttagaattagttttttatatagttctgttcttttatttatttttcggttaaaacatgtcagcgaagcaaaaaaaaatagagacaaaatttgatatagctctgttagtggtttaaatccaataccaaacaaaaacaataaaaaacactaaaaacacttatattaatttaaaattaacttctaaaatttaaaattcggttagggtttataggctccatcggttggcttttttttttctaataagccaaaacggcttattagggaataaaaataaatttgtaagtaaaacttttatatatgtgctctttgtaacttaaaagccaatgctaaaaaaaactacgttgaaaatatctcaaaattaagtttgaaaattcaaaatttggcttattgggccatccgatgggagcctatatgaagcacacacttaatagtgtaaaactttctcatcttccaaacgagacctaaatgagtacagattttatatacctcaaaatttacctcatcttccaaatgaattttaaatgaggctcatgtggaatgtgggaaaaggacgtgagctgctcccacatcttacgctcggaacgtagtacatcaacttgtcgctaggtgtgcatcgacagttacttgcaactttggacgttctgtgtgcaatctgctgcttcggtcagaccagatgtcatggtggcgtctcgtcgtatatcttatttgcccctccttttgttgccgcgagttttggtgcggcttttctgcgctaaaccccgagctgtaattcacgggcatcttcctggaatccttggtctcagttgctttcctgcaacaaaagaaaggagagattatgattgcttctttttcttcagtggcatggctagcttgcttgtcgagattattagtatgtgctatataggcgagtatagtagtatttgtaggccactcgatggtagaaatcttgctttggatcggggaatcgggtttttatcatgtcttgagtgatggtgtgtgggctttgacaggatcggaattttttttctaaggagataagttgttgatgtgatgattgatcaagactaaaatgcgtcaaatagaaatactaggaatccctatcaacgtgaaaagaaataaattctaatgaaatgaccatggtgcatccatagtgttttgtaaaaagcttttctttttctgccgttccttactattattatacacagcacctgaattggatcctttgtagtagcatgtggcttaccattgaaagagacaataatttgcattatgacttctctttgccatctgattggaatttgaaaatgcccaactgagatcaaagtaccacagtaatcgctacagcgtgtcactcactacagtaatttactgttacccccatagcttaatggttgtctacagtatagaagagtagaagacaatctagatccctcgaaaccactatctccagcatgtatgattattggtgcatggcagaaaaagtgtatgtaaaacacaaaatattacgtgacacaagttattcactctcatatgttctagttttagttggtcgcaaagatgaaacttgaactgatgcctgggttgctcgtgttctgcaagtgatcaatttatcatcggtttccttcgttacgtttgagatacaaatcttgttcatgtctgcgacgaacatcaggtggtgtgtcggagatggagtcattcctggagaagttcttcccgggcttgctgaaggggacggcgcacgcgagcaaggacgtgtactgcatctacaacagccaggcgctcacggcgttcacctcgtcgctgtacgcgttcggcatggtcgggacgctggtggcgagccgcgtcacccggcggaccggacggcaggccgtcatgctgatcgggggcagcatgttcctggtcggcgcgctcgtgaacgccgccgcggtcaacattgccatgctcatcatcgggaggatgctgcttggcctggggctcgggttctcgggccaggccacgccggtgtacctcgccgagatgtcgccgccgcggtggcgcggcgggttcatctccggcttcccgctgttcatcagcgtcgggtacctcatcgccaacctgatcaactacggcacgtcgcggatccccgtgtggggatggcgcctgtcgctcggcctcgcggcgttcccggccgccgtcatggtggccggcgcggcgttcatcccggacacgccgagcagcctggtcctgcgcgggaagcacgacctcgcccgcgccgcgctccagcgggtgcgcggcaagggcgtcgacgtcgacgccgagttcaacgacatcctcgccgccgtggagcacgaccgcaggaacgacgagggcgcgttccggcggatcctgcggcgcgagtaccggccgtacctggtcatggccatcgcgttcccggtgttcctcaacctcaccggcgtggccgtcacggccttcttctccccgatactgttccgcacagtcgggttcgagagcgatgccgcgctgatgggcgccgtcattctcggcctcatgaacatcttcggcatcgtcggctcgggcttcgccatggaccgctacggccggaggctgctcttcatgatcggcggcgcgctcatgttcacctgccaggtaaaaacaatgcaaacaaacactcacctagagcgcacatcaacatttcagcaacaagaaagtgacgtcgagccgacgcgtatcgtaggtggcaatggcgagcatcgtggggtcgcagctggggcacgggagcaagatggcgaaggggtacgcggtgacggtgctggtgatgacgtgcgccttctcggcgagcttcagctggtcgtggggggcgctgtactgggccatccccggcgagatctacccggtggaggtcaggtcggcggggcagggcgtggcggtggcgctcaacctgggcctcaacttcgtgcaggcgcagtgcttcctcgccatgctctgctgcttcaagtacggcaccttcctcttctacgcgtcgtggctcgtcgtcatgaccgccttcgccgtcgccttcgtgccggagaccaagggcgtgccgctcgagtccatgggccacgtcttcgcgcgccactggtactggggcaggttcgtcaaggaccacaagttcggcgacgtgtcgacctaaaatttgcaccgcatatgccgatgcggaatgtttggctttgatctcagaaatttagttagcgtgtgtgctctcgatcgtagtataaggctaagatggacgactttgggtaaattaatcaagaatgggcaatgtatgccactgaaatgttagatcatgctcaacggccacagccgtgcagctgcac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0453400, RefSeq:Os04g0453400