Os04g0454600

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0454600| Description = Conserved hypothetical protein| Version = NM_001059495.2 GI:297602837 GeneID:4336018| Length = 4739 bp| Definition ...")
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Gene Name

Os04g0454600

Description

Conserved hypothetical protein

Version

NM_001059495.2 GI:297602837 GeneID:4336018

Length

4739 bp

Definition

Oryza sativa Japonica Group Os04g0454600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23159909..23164647

Sequence Coding Region

23160011..23160565,23162115..23162353,23163553..23164183

Expression

GEO Profiles:Os04g0454600

Genome Context

<gbrowseImage1> name=NC_008397:23159909..23164647 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23159909..23164647 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctagggaaattatttcaatcccgactgatggcacttgaatcggacgcaaagatttacccttttatgctctttgttcatagatttcctggatctcggaacatggccagcggcagtggagtggaaggcgagggattgggtataccatacaggcgccgcttcatcccatttgccaacgatcctatccacacaaccaaagataatatcatttctatggacaagcaccttcccatcacccaaggcaaggacagtgctgcaactaaggagttcatctcttgttatggccattgccgtcctaccacgtatggcgatgaagatgcttctaggacagctgtggaggtcaccggtggtaaacaagatccaaggggggcagttcagaacctaatagatggtgaagtggcagttcaggagctaatagatggtgaagaaattgcaaggaaccaaagggccagtgaggttagtgacaacgatggatatgaagagttcaatgatcgtgccgttaactaccactgtgactgtcatgtttggacgccacttattgcaagcagccaccgtgacggttctatatacgataccaggggcacctttggatctgggtggaaatgggattatcgtattgcagatcgtaacgagactcggttggaggcaatgatgttatcacatcccacgaaagattgctacatgagggatggaacttgcatatggcatcctgcaaatagcatgttgcaaattttctcagtaaagttggctaaaactcctgtagttgatggctcaattgaattgtatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaattggcagggatgatcccatcattgtggagcagggttccctcatcgaaatgactggccctaagcgagggatcgacttttcttgtgctgttctagttgaatatgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgcaacagatcttgaccatatattgacatcacatgtaccagtgagaaatcgcatttatggagattgcggcgcagttgacataactcaagcgaatcttttgtatgcatttgaggcgactgtagaagtcgtcatatcagaagtgcagactagttttgatttgtgtctcagctgttttaccagtgggttacatgaggaaattcggctctttgatggtgcgatcagtgagtcacgtgacttgaggaggtatgtgattgctgtcatggaacatgagtgtatggatttgaagttcaaggtaggtttagggtctgggtgtttcgctgaacattgtcgatccttcaaagcaactaatcatggatgtgccagtgaacaaataaagattgagttcgcctcaatctcggtgaaggtcacttggtcggctatggagttctag</cdnaseq>

Protein Sequence

<aaseq>LGKLFQSRLMALESDAKIYPFMLFVHRFPGSRNMASGSGVEGEG LGIPYRRRFIPFANDPIHTTKDNIISMDKHLPITQGKDSAATKEFISCYGHCRPTTYG DEDASRTAVEVTGGKQDPRGAVQNLIDGEVAVQELIDGEEIARNQRASEVSDNDGYEE FNDRAVNYHCDCHVWTPLIASSHRDGSIYDTRGTFGSGWKWDYRIADRNETRLEAMML SHPTKDCYMRDGTCIWHPANSMLQIFSVKLAKTPVVDGSIELYGYIAVRDLQDPLLNY IVKIGRDDPIIVEQGSLIEMTGPKRGIDFSCAVLVEYDMRIKTGEREEDDLQLIDGAT DLDHILTSHVPVRNRIYGDCGAVDITQANLLYAFEATVEVVISEVQTSFDLCLSCFTS GLHEEIRLFDGAISESRDLRRYVIAVMEHECMDLKFKVGLGSGCFAEHCRSFKATNHG CASEQIKIEFASISVKVTWSAMEF</aaseq>

Gene Sequence

<dnaseqindica>4083..4637#2295..2533#465..1095#acaacacgcacatcacgaaccggaccaaacctccggcgccgcccgccgccgccgccgccgcctacacaaccccccctcgccccccgccgcgccctcctctccgtacgtggagcgcatgcaaatcccctcgcgctcgattcttcgcctcctccgacgccccatcgtcgcgccttattcttgcctgcggcaccgcatctcgatcccctcccgcgatctctcctctcctccatggctacctctggtccggctcgcgggtggctaccgggcttgcgcgaagaatcgcttcagtcacggggacgcttaaccctcctgccagtcgtgtttctcggtgtgttctcctgctctgatcctaaagtttgggcctttcgtctcttgctaaagttctcgatatagattctgttgaatttagttttttttttgttagaactatttgttcttatatcatgttggtgttttgagtataactagggaaattatttcaatcccgactgatggcacttgaatcggacgcaaagatttacccttttatgctctttgttcatagatttcctggatctcggaacatggccagcggcagtggagtggaaggcgagggattgggtataccatacaggcgccgcttcatcccatttgccaacgatcctatccacacaaccaaagataatatcatttctatggacaagcaccttcccatcacccaaggcaaggacagtgctgcaactaaggagttcatctcttgttatggccattgccgtcctaccacgtatggcgatgaagatgcttctaggacagctgtggaggtcaccggtggtaaacaagatccaaggggggcagttcagaacctaatagatggtgaagtggcagttcaggagctaatagatggtgaagaaattgcaaggaaccaaagggccagtgaggttagtgacaacgatggatatgaagagttcaatgatcgtgccgttaactaccactgtgactgtcatgtttggacgccacttattgcaagcagccaccgtgacggttctatatacgataccaggggcacctttggatctgggtggaaatgggattatcgtattgcagatcgtaacgagagtaagtgatatatatctattttcctgttgttatctattttataattaggacatttgtcaagctataggttcagctaatatattctatgttgaaaggttagtgtgcattatattttgtacttaaaatgataaattaaactactaaaaccgggtcacttcacccctgctttaaattgagattttgtaccataatatgacactccactctatgtcatgaatactttcgcaatttctcatgattatctgcatacattatcacatcccaagggtttgtgtccaggaggaaggtggcagcaatgctgccacttatgcaaccctagggtgccaaccagtcctatggctgctggggcccaccatgtggcatctgacctacatgcctgacaacaaacaagacgagaattctgtctattattaagagtctggagtctagtagactaggaagttatcaataaatagaaatatatctcccatttaagtaagggtggcataatagatgatatttatatcaaaccacagctctaagtatcggaagaactttttatttgccactacagagtgtcctattctgggatacgccattggaaaatatcttatacggtctatggcatccacctcacaaatttcacccttatttgcaattgttgaccagtcaagacatgggaaaggtgtaaaattaggatgcctcatccacctcctaggtgatcattcccatgatggccatgatctaactggtgatgcctcctcgatggcactattgaacagaggcagcattctaccatgaccacaatcgatgaagtgtcacagaataaattgcagactttgtgcttgagggggacaattgtggaccagtggaacagagccccctcaactccaaaccatggtggtttgttcccttgtttgggacctgatgttcttttctttttcccctttttttttattttcttctgtcagtctgaattggttactagaaattacattggacagaaggtgtttttttttttttgccttatattgtcccacatgaagtgatctggttttagtaattaggtgggggagtgaaatgagacgggaattatctagacaaccaaaaagctttagtcattagaatggactttctacctttatttttattgtaccatgcatgtattttatctactctttaagtttccgttacaatttggcatgtcatctttgttgtagctcggttggaggcaatgatgttatcacatcccacgaaagattgctacatgagggatggaacttgcatatggcatcctgcaaatagcatgttgcaaattttctcagtaaagttggctaaaactcctgtagttgatggctcaattgaattgtatggatacattgctgtgcgggaccttcaggatccattacttaattatatagtcaaaattggcagggatgatcccatcattgtggagcaggtatgcttccatgctctctacaattatttcaaattactttatttgtttcacattataagatcaaacttacagcatgcatggaacaaatgtgattagagcttacccaacattaaccttaacactaaaccgtccttcacccatggttagccaattttgtgctaaatggtcatttaaacagaaacggctaaccaccatgtggcgtttaaacaggctaaatgaccattcaggtgaacaatgaggttaccttttgttgttactccctccgatttcattttaattgacgttttggacaatgacacggtctacaaaatatatctttgaccttatttttctattataatatatgcaataaataaatgcatgtttacttttattatagtgctttgaaagataaatctatatatgttgtcctagttttctttaaactagatattttaaaagttattgatggtcaaagttataaaagttcgatctcaaccttgtccaacacgtcaattattttatagagccggagggagtattttacagccacaaaatatcttttacattactgaatttaggatagagtggaaatggtgtattaggctcagtttgatagtgtaggctcagtttgcaatctttttttcttaaaaagaaatgaaatagtagtagtctatggtttccgccatatttctcatgtgaatgttttcttttcttaacagaaacaggctgctactatgattttcattgtcccaccatgatctaacggcttagtttttttttctttgataatgtggtaattttttttctgaacagaaacatgccgctactatgattttcattgtcccaccatgatctaacagcttagtttttttttctttgataatgtggtaatttgtaggtcttcaaagtgaacatagtgcctctttttcaagctttctttatagtataatagatacataacatacgtgcccgaaaaggcagctaaaatattatagtgttatagctgcaaaaaatttgcttccataaacacatgtctggacagtgaggaaggtgagttgggatgcgattagtgtgtccacaaagtaacaaaataatattatggattgataagacctttatcaagtactatattgtggaatgataattatgatcagacctgtataatcattaactaggtgcaagtgaatgtacgtgttgcaaacagaatcatttaaatagttgcgaaccctgtggttcctgcctagtaccacataaaattgttctttttttggttgtctacagacatatgaatgacccttcacaacaaagtcctttttgtttacatttcacacaagcttatatgattaatattttggaattcaaaattaactcaaataaatagcgtgggacaaaccttctctaacattcttgcacacattgtaaccgttctgtttgacacatgacgaatatcttgggcatcaactgtaaaatgatccgtttagctaggcattattgtgactaaaacgttaatattttcttagttacttactttgctatgaagagctactaaatattaatatttttttagggttccctcatcgaaatgactggccctaagcgagggatcgacttttcttgtgctgttctagttgaatatgacatgagaatcaagacaggagaacgagaggaagatgatctacaactgattgatggtgcaacagatcttgaccatatattgacatcacatgtaccagtgagaaatcgcatttatggagattgcggcgcagttgacataactcaagcgaatcttttgtatgcatttgaggcgactgtagaagtcgtcatatcagaagtgcagactagttttgatttgtgtctcagctgttttaccagtgggttacatgaggaaattcggctctttgatggtgcgatcagtgagtcacgtgacttgaggaggtatgtgattgctgtcatggaacatgagtgtatggatttgaagttcaaggtaggtttagggtctgggtgtttcgctgaacattgtcgatccttcaaagcaactaatcatggatgtgccagtgaacaaataaagattgagttcgcctcaatctcggtgaaggtcacttggtcggctatggagttctagaagggtacttagcgtttggacattttttttttatttgttactccctcagttattgtaagactttctagcatgttcatattcatctggaataagttcatctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0454600, RefSeq:Os04g0454600