Os04g0460300

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Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0460300| Description = Amino acid/polyamine transporter II family protein| Version = NM_001059524.1 GI:115458777 GeneID:4336049| Length = 2...")
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Gene Name

Os04g0460300

Description

Amino acid/polyamine transporter II family protein

Version

NM_001059524.1 GI:115458777 GeneID:4336049

Length

2509 bp

Definition

Oryza sativa Japonica Group Os04g0460300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23376360..23378868

Sequence Coding Region

23376456..23376698,23376787..23377398,23378004..23378516

Expression

GEO Profiles:Os04g0460300

Genome Context

<gbrowseImage1> name=NC_008397:23376360..23378868 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23376360..23378868 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccattggcggagcagcgccgccgcacccgccccgtggcggcggcggcggctcgccggaggacagcagcaccgcgcggcggccggacttcgagcagcccctcctccaggcccacgccgccgtgccggcccgcgggaagcaggagccggtggagcgggaccacgaggcgcagtgctcgccggaggccgacggcgacggcgccaccttcgtgcgcacctgcttcaatggcctcaacgcgctgtcaggcgttgggctgctgtcgattccgtacgccttgtcggagggagggtggctgagcctggtgctcctgctcgccgtcgccatggtctgctgctacaccggcctcctcctgcggcggtgcatggccgcgtcgccggccgttcggggttacccggacatcggcgcgctggcgttcggggccaagggccggctcgccgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactggagggggacaacctggacaagctgttcccgggcaccagcctcgccgtcggcgggctcgtggtgtccgggaagcagctgttcgtcgtggtcgtcgccgtcgtcatcctgccgacgacgtggctgaggagcctcgccgtgctcgcctacgtgtcggccagcggcgtgctcgcgtccgtcgtcgtggtgttctgcgtgctgtgggcggcggtgttcgacggcgtcgggttccacgggaaggggaggatgctgaatgtcagtggcctgcctactgctcttggcctgtacaccttctgctactgcggtcatgccatattccccacgctctgcaactccatgcaggaaaaggacaagttctccagggtactggtcatatgcttcgtggcgtgcactgtcaactacggatccatggccatactcggctacctcatgtacggcgacgacgtcaaatctcaggtgacactgaacctcccggagggaaagatcagctcgaagctggcgatctacacgacgctgatcaacccgttctccaagtacgccctgatggtgaccccggtcgcgacggcgatcgaggagaagctgctcgccggcaacaagaggtccgtcaacgtgctgatcaggaccctcatcgtcgtcagcacggtggtgatcgccctcacggtgcccttcttcggccacctcatggcgctcgtcggctcgctgctcagcgtcatggcctccatgctgctcccctgcatctgctacctcaagatcttcggcctgacgcgatgcggcaggggcgagaccctgctgatcgccgcgatcatcgtgctcggttcgttggttgccgcgacgggtacgtactcttctctgaagaagattttctatgagttttga</cdnaseq>

Protein Sequence

<aaseq>MAIGGAAPPHPPRGGGGGSPEDSSTARRPDFEQPLLQAHAAVPA RGKQEPVERDHEAQCSPEADGDGATFVRTCFNGLNALSGVGLLSIPYALSEGGWLSLV LLLAVAMVCCYTGLLLRRCMAASPAVRGYPDIGALAFGAKGRLAVSAFLYAELYLVAI GFLILEGDNLDKLFPGTSLAVGGLVVSGKQLFVVVVAVVILPTTWLRSLAVLAYVSAS GVLASVVVVFCVLWAAVFDGVGFHGKGRMLNVSGLPTALGLYTFCYCGHAIFPTLCNS MQEKDKFSRVLVICFVACTVNYGSMAILGYLMYGDDVKSQVTLNLPEGKISSKLAIYT TLINPFSKYALMVTPVATAIEEKLLAGNKRSVNVLIRTLIVVSTVVIALTVPFFGHLM ALVGSLLSVMASMLLPCICYLKIFGLTRCGRGETLLIAAIIVLGSLVAATGTYSSLKK IFYEF</aaseq>

Gene Sequence

<dnaseqindica>97..339#428..1039#1645..2157#agcaaactgcacgactcgcgcgtgctctgctcgcttctctgttccgttcgctccacggttctctgctcccccctccgtcgcgtcgcgtgcaggaggatggccattggcggagcagcgccgccgcacccgccccgtggcggcggcggcggctcgccggaggacagcagcaccgcgcggcggccggacttcgagcagcccctcctccaggcccacgccgccgtgccggcccgcgggaagcaggagccggtggagcgggaccacgaggcgcagtgctcgccggaggccgacggcgacggcgccaccttcgtgcgcacctgcttcaatggcctcaacgcgctgtcaggcgagtacaagaaacactcgatatttggtcgtaggagctgttcgtccggtctgtttaactcgattaatcttgatctcttggggttcaggcgttgggctgctgtcgattccgtacgccttgtcggagggagggtggctgagcctggtgctcctgctcgccgtcgccatggtctgctgctacaccggcctcctcctgcggcggtgcatggccgcgtcgccggccgttcggggttacccggacatcggcgcgctggcgttcggggccaagggccggctcgccgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactggagggggacaacctggacaagctgttcccgggcaccagcctcgccgtcggcgggctcgtggtgtccgggaagcagctgttcgtcgtggtcgtcgccgtcgtcatcctgccgacgacgtggctgaggagcctcgccgtgctcgcctacgtgtcggccagcggcgtgctcgcgtccgtcgtcgtggtgttctgcgtgctgtgggcggcggtgttcgacggcgtcgggttccacgggaaggggaggatgctgaatgtcagtggcctgcctactgctcttggcctgtacaccttctgctactgcggtcatgccatattccccacgctctgcaactccatgcaggaaaaggacaagttctccagggtgagctgcccactgttttcacttttgatgtcactgaactactgaaggcttgactggtgaatttgggttctttttatttcatttaactttatttatctgatattgaactctgaagtaaccttgaatatattgagtagtaaaacagtcacgcacattgcagcatcgaataattcatgtcaagctcaacaatgccaagttgcatcaaatagctgttaagtgtctgttgccacatattattgcttgacaaaaagaaatgctttaattctcatatgaactgtggaattatgcaatgaatctgacactatatagttgatagctatctgaaaatgaaaatgtctgacgatgactgaacagtagtacaatatccaacgcaactacttcctatccgtcctaggataatgaatctgatagaacctttgttcaaattctttgttctaggttgggtcaaatctcatactagtttgcgacatttttgggtggaggtagtaaaaattaactctttattttcttttttttttaactttggacagtactcctacagtagctcattttactacccctgactgactgaactgtctgtcttctacggttctacctgcatataggtactggtcatatgcttcgtggcgtgcactgtcaactacggatccatggccatactcggctacctcatgtacggcgacgacgtcaaatctcaggtgacactgaacctcccggagggaaagatcagctcgaagctggcgatctacacgacgctgatcaacccgttctccaagtacgccctgatggtgaccccggtcgcgacggcgatcgaggagaagctgctcgccggcaacaagaggtccgtcaacgtgctgatcaggaccctcatcgtcgtcagcacggtggtgatcgccctcacggtgcccttcttcggccacctcatggcgctcgtcggctcgctgctcagcgtcatggcctccatgctgctcccctgcatctgctacctcaagatcttcggcctgacgcgatgcggcaggggcgagaccctgctgatcgccgcgatcatcgtgctcggttcgttggttgccgcgacgggtacgtactcttctctgaagaagattttctatgagttttgaagtcaagagatgcacattaggcatggaaacaccgatgtccgaatttgtgtacgtttttgtagcaacgcaattccgtaatgtacctcaatgtcagcagtcagcagagtaatctgattaaatcctgagattctgtagtggaggcaaggtagtacagataacgaggattagagtgctttaattcgggatcgtaagtatgtttgagctatgggagctattggccttgtatctgtatctctgttgtcagaaatagtacagttagtcaaaatgccaaatgatatttgtaggatatcagcactccatctgaatctgttgtatcttgtaagaacttgaatgtattgaagcattttattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0460300, RefSeq:Os04g0460300