Os04g0461100

From RiceWiki
Revision as of 11:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0461100| Description = Plastid and cyanobacterial ribosomal protein PSRP-3/Ycf65 family protein| Version = NM_001059529.1 GI:115458787 GeneI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0461100

Description

Plastid and cyanobacterial ribosomal protein PSRP-3/Ycf65 family protein

Version

NM_001059529.1 GI:115458787 GeneID:4336056

Length

1648 bp

Definition

Oryza sativa Japonica Group Os04g0461100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23425894..23427541

Sequence Coding Region

23425930..23426199,23427044..23427325

Expression

GEO Profiles:Os04g0461100

Genome Context

<gbrowseImage1> name=NC_008397:23425894..23427541 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23425894..23427541 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggcgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggcccaagctttccgccgcctccccctgcaccacctcctcctcctccactccacgcctcgtccacctcggcagcaggaggcttccccttcgctcgctccgtggcctcgccgccgccgccgcttctggcgccgtcgaagcggaggagggagaagaggagaagcaagtcggaggtggggatgcgagcgccggcgaggaagcgcaggagtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatatggatggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattccgttaagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagctggaggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactgatatcatcaacctttggcaacagggtggtggcagcttgtcaacctaa</cdnaseq>

Protein Sequence

<aaseq>MLAMSVHPAATPALASRARISRPKLSAASPCTTSSSSTPRLVHL GSRRLPLRSLRGLAAAAASGAVEAEEGEEEKQVGGGDASAGEEAQEYKVKVPERQDPM LVLKFIWMEKNIGIALDQLVPGYGSIPLSPYYFWPRKDAWEELRAKLEEKEWISQKQM IILLNQATDIINLWQQGGGSLST</aaseq>

Gene Sequence

<dnaseqindica>37..306#1151..1432#cctcttatccgcacaggagcctcggactcggacacgatgctggcgatgtccgtccaccccgccgccacgccggccctcgcctcgcgcgcccgcatctcccggcccaagctttccgccgcctccccctgcaccacctcctcctcctccactccacgcctcgtccacctcggcagcaggaggcttccccttcgctcgctccgtggcctcgccgccgccgccgcttctggcgccgtcgaagcggaggagggagaagaggagaagcaagtcggaggtggggatgcgagcgccggcgaggaagcgcaggaggtaatgggctagtagccgctccaaaccatgccagtgactgaaattacggggtttttttttttaccgagtcgagctcaatttcagaaggaagtgttgttttttgaagaggatggagttcaatcacatttggtttcgcatgaatttgatttttcttgaatcaattttggttaccgaactgattacttgagctcataggtgaaatacagtacgaggtgtacatttgggtgaattcacgagtagagtaaatctttagacacaatgcacagctgaaagcttaagagaagtcacaagtagagtaaattagagaagttctagtctagttgagcatgtttgggcactcgggctgtccttttggtgcagttttgcacttctgcagataaaaggtgtatgctagtgatgaagaggcgaagagcacatgaaagcatgtccacaaacttgagcgtgtgccatttttggttgtatgtgtaagcaagaactgaactattgaacaaactgtagcattgacaggttttggtcatgaaaggagttttttttcattcagctatttacgtgattatgtaacaacattaacaggcacaataagttcctttttcatcactatatcagatttcagagatgtacactaaaagtggattagttttgattatatgggagttaccctcacagttgaaaaatggggccttttgtagagaaatgaagttgtcaatggaacacgtacagtagttgttgcaatttattttactacgacttgagctgtgttaaaactgcacaatttattttactcagatatgcaaaatcagtattagcattatgagatttgaaacgaattgattttgtatcgcagtacaaggttaaggtgcctgaaaggcaggatccaatgcttgttctgaagttcatatggatggagaagaacattggcatagccctcgaccagttggttcccggctatggcagcattccgttaagcccatactacttctggccacggaaagatgcctgggaggagctaagagcaaagctggaggagaaagagtggatctctcagaaacagatgatcatccttctgaatcaggccactgatatcatcaacctttggcaacagggtggtggcagcttgtcaacctaagaggatatctcaattctcccatccttgagaaccttgtttctttttttcttgctttggttacacggatctttgttgttacatgaccctgtagatcgattcaaactgttttcggatacggttttgtttatggaaatgaattgtgattgatctctgtaaggtaaacgatttgggctccatcatccgcagggaagattgctaatacctcttgatactact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0461100, RefSeq:Os04g0461100