Os04g0463800

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0463800| Description = Protein prenyltransferase domain containing protein| Version = NM_001059549.1 GI:115458827 GeneID:4336079| Length = ...")
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Gene Name

Os04g0463800

Description

Protein prenyltransferase domain containing protein

Version

NM_001059549.1 GI:115458827 GeneID:4336079

Length

5092 bp

Definition

Oryza sativa Japonica Group Os04g0463800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23551993..23557084

Sequence Coding Region

23554740..23557043

Expression

GEO Profiles:Os04g0463800

Genome Context

<gbrowseImage1> name=NC_008397:23551993..23557084 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23551993..23557084 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccaactcctccgctcgccgccctccaccgcttcctcgcctcgccgtccccgccgccgctcccctcgctgctcaccctccacgcgctcgccgtcacatccggcctctccccgcgccccgacttcgccgccaagctcgtctccgcctactcctccgccggcctccccgccctcgccgcgctcgccttcgccgcctccccctgcccggacgccttcctctggaactccctgctccgctcccgccaccgcgcctccgacttcgcctccacgctctccgcgcaccgccgcatgcgcgcctcgggggcgcggccctcccgcttcaccgcgcccctcgtcgcctccgccgccgcggagctcggcgccctccctgtaggcgccgccgtccacgcctactccgtcaggttcggcctcctggagggcgatggttcagtcgcggtcgcgtcgtcgctggtctacatgtacgccaggtgcggcagcgtccgcgacgccgtgaggctgttcgacgaaatgcccgagagggacgtggtcgcgtggactgccgtgatctccgggtgcgtgtgtaacgggcagtgcggggaagggctgagctacttggtgcgaatggttcggtctgcaggtgatggcggtgcgaggccgaactcacggacgatggagagtgggttggaggcctgcggggtgctaggggagctctctgttgggacatgcttgcatgggtttggggtgaaggccggggttggacactgcccgtcggtggtttcatcgcttttttctatgtacactaagtgcgatagcactgaggatgcacggattttgttcccggagttgccggagaaagatttggtttcctggaccagcttgattggagcatactgtagggcaggccatgctgagaaggctgtggagttgttcctgggcatggaggagtctggtctgcaaccagacgaggttgttattagttgtttacttgcagggttgggtaatgatgctaaggtgcgtggagggaagacgtttcatgcagctatagtgaggagaaactttggagatagtgttctgattgggaatgctttgatctcgatgtatgcaaagtgcaaacaggttgatattgcagccacggttttcagaatgttgcatcaacgagacacagactcatggagttcaatggttgtagcatattgcaaagctggacttgatttgaaatgcttggagttgtatcgagaaatgcagttcagagacaaggatgagtttgaatatgacaccaacagtttgatttccattatttcttcttgttcaaggcttggtagactacgattaggtcaatcagcacattgctattcaatcaaacacttagccggtgaaaattcatcagttgcaaatgcactaattagcatgtatggaaggtgtggtaattttgacgttgcacggaaaatatttggtatggtcaaaacaaaggatgttgtcacatggagtgcattaatttccagctattctcacctggggcattcaaaggatgctttgttactgtatgatcagatgctcactgaaggtgttaaacccaactcagcaaccttggtctctgtcatttcatcttgtgcaaatttggctgcattggaacatggagagctcatacattctcatgtgaaagatgtggggctggagtgtgatttgtcaatttgcacagcacttgttgacatgtatatgaaatgcggacaacttggcatcgcaagaaaaatgtttgattccatgctcgaaagggatgttgttacttggaatgtgatgatatcaggctatgggatgcatggtgaagcaatacaagcattaaaactttttagtatgatggaaagaggaaatgttaagcctaatagcctcacttttcttgccattctgtctgcttgctgccatgcaggacttgttgacaagggcagggagttgttcactagaatggaggaatactcccttgagcctaacctgaagcactatgcctgtatggtggatcttctagggaaatctgggcatcttcaagaagcagaagatgtggtttctgcaatgccaatagaacctgatggtggaatatggggaactttacttggtgcctgcaaaatgcatgacaattttgaaatgggtttacgggttgcaaagaaggcgtttgcttctgacccagaaaatgatgggtactacattttaatgtcaaattcgtatggtagtgctgagaaatggaatgaaatagagaaactaagagacatgatgaagaatcatggagtggaaaagagtataggttggagcacaattgatatttgtgggtaa</cdnaseq>

Protein Sequence

<aaseq>MPPTPPLAALHRFLASPSPPPLPSLLTLHALAVTSGLSPRPDFA AKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASG ARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGS VRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTM ESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPEL PEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRG GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHL AGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLL YDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMY MKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLT FLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSA MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWN EIEKLRDMMKNHGVEKSIGWSTIDICG</aaseq>

Gene Sequence

<dnaseqindica>42..2345#agttatacacggttacacctgagtttcgaaccggcgaacaaatgccgccaactcctccgctcgccgccctccaccgcttcctcgcctcgccgtccccgccgccgctcccctcgctgctcaccctccacgcgctcgccgtcacatccggcctctccccgcgccccgacttcgccgccaagctcgtctccgcctactcctccgccggcctccccgccctcgccgcgctcgccttcgccgcctccccctgcccggacgccttcctctggaactccctgctccgctcccgccaccgcgcctccgacttcgcctccacgctctccgcgcaccgccgcatgcgcgcctcgggggcgcggccctcccgcttcaccgcgcccctcgtcgcctccgccgccgcggagctcggcgccctccctgtaggcgccgccgtccacgcctactccgtcaggttcggcctcctggagggcgatggttcagtcgcggtcgcgtcgtcgctggtctacatgtacgccaggtgcggcagcgtccgcgacgccgtgaggctgttcgacgaaatgcccgagagggacgtggtcgcgtggactgccgtgatctccgggtgcgtgtgtaacgggcagtgcggggaagggctgagctacttggtgcgaatggttcggtctgcaggtgatggcggtgcgaggccgaactcacggacgatggagagtgggttggaggcctgcggggtgctaggggagctctctgttgggacatgcttgcatgggtttggggtgaaggccggggttggacactgcccgtcggtggtttcatcgcttttttctatgtacactaagtgcgatagcactgaggatgcacggattttgttcccggagttgccggagaaagatttggtttcctggaccagcttgattggagcatactgtagggcaggccatgctgagaaggctgtggagttgttcctgggcatggaggagtctggtctgcaaccagacgaggttgttattagttgtttacttgcagggttgggtaatgatgctaaggtgcgtggagggaagacgtttcatgcagctatagtgaggagaaactttggagatagtgttctgattgggaatgctttgatctcgatgtatgcaaagtgcaaacaggttgatattgcagccacggttttcagaatgttgcatcaacgagacacagactcatggagttcaatggttgtagcatattgcaaagctggacttgatttgaaatgcttggagttgtatcgagaaatgcagttcagagacaaggatgagtttgaatatgacaccaacagtttgatttccattatttcttcttgttcaaggcttggtagactacgattaggtcaatcagcacattgctattcaatcaaacacttagccggtgaaaattcatcagttgcaaatgcactaattagcatgtatggaaggtgtggtaattttgacgttgcacggaaaatatttggtatggtcaaaacaaaggatgttgtcacatggagtgcattaatttccagctattctcacctggggcattcaaaggatgctttgttactgtatgatcagatgctcactgaaggtgttaaacccaactcagcaaccttggtctctgtcatttcatcttgtgcaaatttggctgcattggaacatggagagctcatacattctcatgtgaaagatgtggggctggagtgtgatttgtcaatttgcacagcacttgttgacatgtatatgaaatgcggacaacttggcatcgcaagaaaaatgtttgattccatgctcgaaagggatgttgttacttggaatgtgatgatatcaggctatgggatgcatggtgaagcaatacaagcattaaaactttttagtatgatggaaagaggaaatgttaagcctaatagcctcacttttcttgccattctgtctgcttgctgccatgcaggacttgttgacaagggcagggagttgttcactagaatggaggaatactcccttgagcctaacctgaagcactatgcctgtatggtggatcttctagggaaatctgggcatcttcaagaagcagaagatgtggtttctgcaatgccaatagaacctgatggtggaatatggggaactttacttggtgcctgcaaaatgcatgacaattttgaaatgggtttacgggttgcaaagaaggcgtttgcttctgacccagaaaatgatgggtactacattttaatgtcaaattcgtatggtagtgctgagaaatggaatgaaatagagaaactaagagacatgatgaagaatcatggagtggaaaagagtataggttggagcacaattgatatttgtgggtaagtttaattggagctatgccttttcctaggtccttgtgagcagttgtgatctagttcatcttctctatgtcagaaatgtttgtcttacaggtttatgaaaaatcaactgacccaatggcagcattctctctttgaacaatctgaatttagaagttcagaggatatgtgcatttcttttgtctctggaatctggagtgagtcaatggtcaatggattgacagaatgggggaatgaggtagtagattcatcagaatttaggaacaaagcccaaagggtaaatatgaaattggagttggatgtaatgtatgcttcctgatgtgtcatggtttccaccataaaagagggttactctattgcgtgtagactggagaatattctcagtaatataatgtgcaaccatatcataaaaagagaaaattgtcatgattcagcttaaggtggctgccatgcttatgttcttacgtcatagcactgagccaggtgaactgggacatggcagttgcagcattatggcagtgaatttctgttttgtgctgatggttacatcatcttggtaattataactgtgcagaatactgcttgactatgggcataggaacattatgtgcagtattctaaaaggactattgtgttggcttttacagcaacaaaatactgaaattgtgtcctatggctcgtggtatgttaactcactgaaccacttgactggcatatttgatgatatgacatttttgttaatcatcattacttccattttctgcttcaaccttcaatatcttatatacctttcaatgtttgctctctggacagattagaaatggacgtgctgtggtggagtaaagacctgtacaggttcagcaaattcaatttcctatatttcctttcactctagtgcatcactgcttccctttatatctactactaatgcaattttgcctttgatatcttaaaatgttcagggaaatcttcatttgaagagttcttgtgataaaatattaagggagctggatagctggtgttttagcagcctatgctgctaggaacacacaggtgcaaagtgctcttgagaatcaaaacatattattattacgatctcgtctgctcacgttgagtttattttccaccaacaggtatgtagtggccatcagttgtgttcttgaagagtaacttaacaacgtttctgatttttgctttatgatttgtttgttcatcacactattctggcatacctgaaattgtggttgataacttgatattgacatgctattcatcttgttctcgtttccttcttgtgtcgaagcactgaaacccccataccaagggcactctagataccttgtacccaatctgtggtgtaaccatgtaaggtcggatcactctgtttcttggagcttatgcttagtttttactgacccactcttccaagttccatctataccatggaagagaaaattgttcacttgtgtactgaaaagtcaacatcatggggaaccaagctagaaaggaacattgaggagatcatccttggtagttttctgtttggtgcttactgaattactatattggtactgtagctacactggacattatttggcaatgactgtagtgaactaggcagcttttcatataagtactgttatatcgccacaattgttgattctaaaagaactacacatatttgaagatgcataacccacagttcatggtacggtacctcgcacgtaaaaatttgatacgtagctcactctgcacttgatcaggcatttgtaaatgcaatgtggaaccaagtattcttttcgtagaggcacattttagtgcttccactttcattatgttatatcatgaacgggttcttctgtgggcaggttcatgatctttttgtagcgaggactttcacaggttcaacaaatccaattgcccactcccacattacttgcgatgacttccttttcttctgcaaccaatacaacttttccttttaatctttattatgctcaggttaaatgttttaactcatgcacatatacataacctttttctcatctgctcatacaaattttccattggctggtatgtatgtagcagcaatcattcattcttggattcctgaggagcaacctaacagaagacccaacttttatctagctgtaggtttggttcttcatcactaaattctggtttgtgcaacatgaatgtgtggataatgttagcatgatgcttatcttgctctaactcccttgttacgtctgcacaggaacttcccatgtggaaggacatatctcgtaccagagctatgaggtagagtgggttatcataccaaaatctccacatgcttttggtgccacatacccacaacgatccgagctagtggcgctggtagcacttcactggagcaaatgatagtagccgcatatgcaggtgtgcaccctctcttcttttggatgtgcgcaccaactgtttttgcaatgcattcgcctggaatgggtgtgggaaataaaatttatggacctcatataatttgggattctttggtgtcttcatgtcatgtactcacgtccctttgcagtgtacatgacgtctaaaggattaggggcacccgtgtatacgagtgtaactctaaacgcagtctctctctctctctccctctctctctctctctctctcgtgtgtgtgtgtaacaaatcatgttcatttttttggggggtggggggtaactttctagtaatgcgaatataaacttgtttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0463800, RefSeq:Os04g0463800