Os04g0464400

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0464400| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001187041.1 GI:297723212 GeneID:927131...")
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Gene Name

Os04g0464400

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001187041.1 GI:297723212 GeneID:9271316

Length

4196 bp

Definition

Oryza sativa Japonica Group Os04g0464400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23577202..23581397

Sequence Coding Region

23577202..23578087,23580145..23580707,23580775..23580992,23581172..23581280,23581395..23581397

Expression

GEO Profiles:Os04g0464400

Genome Context

<gbrowseImage1> name=NC_008397:23577202..23581397 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23577202..23581397 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttctgccggcgttcatggcggcgacgacggcgtggtggtggatttcaggggaaacccggtggacaaggaccggaccggaggatggctcggagccggtctcatcctagggacggaattggcggagcgcgtgtgcgtggtgggcatctcgatgaacctggtgacgtacctcgtcggcgacctgcacctctccaacgccaggtcggccaacatcgtcaccaacttcctgggcacgctcaacctcctcgccctcctcggcggcttcctcgccgacgccgtgctcggccgctacctcaccgtcgccgtctccgccaccatcgccgccatcggtgtgagcctgctggcagcgagcacggtagtgccgggaatgcggccgccgccgtgcggcgacgcggtggcggcggcggcggcggcggagagtggtgggtgcgtggcggcgagcggcgggcagatggcgatgctgtacgcggcgctgtacacggcggcggcgggggcgggggggctgaaggcgaacgtgtccgggttcgggtcggaccagttcgacgggcgcgaccgccgggaggggaaggccatgctcttcttcttcaaccgcttctacttctgcatcagcctcggctcggtgctcgcggtcaccgcgctggtgtacgtgcaggaggacgtcggccgcggctggggctacggcgcgtcggccgccgccatggtcgccgcggtggcggtgttcgccgccggcacgccgaggtaccggtaccggaggccccaggggagccccctcacggcgatcggccgcgtgctgtgggcggcgtggcgcaaacggaggatgccgttcccggcggacgccggcgagctccacggcttccacaaggctaaggtgccacacactaacaggctcaggtgtctggacaaagccgcaatcgtggaggccgacctggcggcggcgacgccaccggagcagccagtggcggcgctgacggtgacggaggtggaggaggcgaagatggtggtgaagctgctccccatctggtccacgagcatcctcttctggacggtctactcccagatgaccaccttctccgtcgagcaggcgtcgcacatggaccgccgcgccggcggcttcgccgtgccggcgggctccttctccgtcttcctcttcctgtccatcctcctcttcacctccgccagcgagcggctcctcgtcccgctcgcgcgccgcctgatgatcacacgccgcccgcaggggctgacctccctgcagcgcgtcggcgcggggctcgtcctcgccacgctcgccatggccgtctcggcgctcgtcgagaagaagcgccgcgacgcgtccggcggagccggcggaggaggcgtcgcgatgatcagcgcgttctggctggtgccgcagttcttcctggtgggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggcccccgagcggatgaagtccatgagcacgggcctgttcctcgccacgctcgccatggggttcttcctgagcagcctcctcgtgtccgccgtcgacgccgccacgcggggcgcgtggatccgggacggcctggacgacgggaggctggacctgttctactggatgctcgccgcgctcggggtggccaacttcgcggcgttcctggtgttcgcgagccggcaccagtacaggccggcgatactgcccgcggcggactcgccgccggacgacgagggcgcggtcagggaggccgcgacgacagtgaaagggatggacttctag</cdnaseq>

Protein Sequence

<aaseq>MVSAGVHGGDDGVVVDFRGNPVDKDRTGGWLGAGLILGTELAER VCVVGISMNLVTYLVGDLHLSNARSANIVTNFLGTLNLLALLGGFLADAVLGRYLTVA VSATIAAIGVSLLAASTVVPGMRPPPCGDAVAAAAAAESGGCVAASGGQMAMLYAALY TAAAGAGGLKANVSGFGSDQFDGRDRREGKAMLFFFNRFYFCISLGSVLAVTALVYVQ EDVGRGWGYGASAAAMVAAVAVFAAGTPRYRYRRPQGSPLTAIGRVLWAAWRKRRMPF PADAGELHGFHKAKVPHTNRLRCLDKAAIVEADLAAATPPEQPVAALTVTEVEEAKMV VKLLPIWSTSILFWTVYSQMTTFSVEQASHMDRRAGGFAVPAGSFSVFLFLSILLFTS ASERLLVPLARRLMITRRPQGLTSLQRVGAGLVLATLAMAVSALVEKKRRDASGGAGG GGVAMISAFWLVPQFFLVGAGEAFAYVGQLEFFIREAPERMKSMSTGLFLATLAMGFF LSSLLVSAVDAATRGAWIRDGLDDGRLDLFYWMLAALGVANFAAFLVFASRHQYRPAI LPAADSPPDDEGAVREAATTVKGMDF</aaseq>

Gene Sequence

<dnaseqindica>3311..4196#691..1253#406..623#118..226#1..3#atggtgcgtcgtagtagggaactcgattaagacgctgatgcgtgatgtaatacgcttagtagagtaagtcgatgcttattggatctttctttaactgtatgcgtgtacacgctgtaggtttctgccggcgttcatggcggcgacgacggcgtggtggtggatttcaggggaaacccggtggacaaggaccggaccggaggatggctcggagccggtctcatcctaggtatggcatgtgtgtgtgtacgttgtgcacttgtgcttggtcacgccggcctgttgggtgtacttttttttttctgttagtttttgttttttttttttttgcgagagcgtgcgactgcgacgacggttttttgttcatggttgtgatgatcgagttttttttttttttgtcgtgataagggacggaattggcggagcgcgtgtgcgtggtgggcatctcgatgaacctggtgacgtacctcgtcggcgacctgcacctctccaacgccaggtcggccaacatcgtcaccaacttcctgggcacgctcaacctcctcgccctcctcggcggcttcctcgccgacgccgtgctcggccgctacctcaccgtcgccgtctccgccaccatcgccgccatcgtacgtaccgcagctgcgcagcacacaacacagcatgatctcccttgtctgacgtctacacgcgcagggtgtgagcctgctggcagcgagcacggtagtgccgggaatgcggccgccgccgtgcggcgacgcggtggcggcggcggcggcggcggagagtggtgggtgcgtggcggcgagcggcgggcagatggcgatgctgtacgcggcgctgtacacggcggcggcgggggcgggggggctgaaggcgaacgtgtccgggttcgggtcggaccagttcgacgggcgcgaccgccgggaggggaaggccatgctcttcttcttcaaccgcttctacttctgcatcagcctcggctcggtgctcgcggtcaccgcgctggtgtacgtgcaggaggacgtcggccgcggctggggctacggcgcgtcggccgccgccatggtcgccgcggtggcggtgttcgccgccggcacgccgaggtaccggtaccggaggccccaggggagccccctcacggcgatcggccgcgtgctgtgggcggcgtggcgcaaacggaggatgccgttcccggcggacgccggcgagctccacggcttccacaaggctaaggtgccacacactaacaggctcaggtcaacacacttaactgttcacattgatatcattttcaatcatatcttttcttttttgcaaagttataaaaaatatctacatttagtttgttgttaaaatttggtaaatacatcataaatcctgaaaaaattagtaatattaccaacttgttaaaattttggtattaccaaaattaatttggtaagatttattttggctacaatctaaacaaccctaagttactagttgtcaagctctgtaccgtgtcatgtcaatgtgtcatatactcatatgctagatatataacagaatgaccaaaattcaaaccacgctataaaattctccgattttcgaaattaaatatttgaagtgttcgtctgaaaaaaacttgctattttgacatagactgatagacatgcacattttttacttttttaggtgatacagtatagtcatgatttatatgattccagcggatgaaacgtagacgaagagttggcttcaaaaaagaaaagtagataaagagttcgatacaagcagctattcagtaaaggcgtatattagtagaagtgttttctgtgttgcgagtgactatgacatctgaaacgcttgaaacgaacaagagaaactggagacgacaaattttggtagatttcttgcctgtacagcacgtagaaccatgataattaggaaaaggaaacgaatgaaaccgacagagtttgataccaaaaatacacggaagagaaccctatctgatccgatgctaggatttcgcatatgctcctatatatcggtagatcattgcttaagtaagcagagattgataaattggcagttgtacgtgtaatccaaagccaattaatcctagcaaggccaccacaccggatacaggtcctctacagtatagcagaggactgtagctacagtattctgtgtctgctacagtgaatcaatgctgcaaacattgttctattactgtagcaagtactctgtgaacagtaacctttttactctgttcctatttactgtttggatctactgtaggaatttgttttagacggttggatgtagatccaacagcaaacaacacaacctaatgcagagggagctacagcgctctgcattaggttgtgttgtttgcgtacgtattactactaggaagctactgtttggtagtaactgattttagatgcccacaaaataagctcatataattgatctataatgaaatccaaggttatatgtttgccctgttattgagaaaacaaatctcatgcagtattaagtgttgcttgccacactaaacactcatagttgggagccgaaggatctaaaccggcatgctaaatctgcaaatcatcacctccatgcaaacgacccgtcactaaagattttgtagcaaatgcttctgaacattttggggagcactacaatttttttttgcagaacactgaaaactgacgaggaatggtagagagagctcaaagcagaaccgtccatgccttgcaaattgtagtaaacttcatcaaactgcgttgcgaacgaccagcgttagcatactatgaatccaaagttgtccatcatgcatgaatcaaacttgacatatcacatatagtgataacaaagtttgcatcttagcacgtgttgtaatatggctggtggatcgtgatctgccctttctattttatcatagtattattaatgtggattatttgctccatatgtcttaaaatatcttttcgaaaacaaaatctattgcattgctaggaacacttgcatgtaagtcattattttctaagtttattttaaaataatcgagacaatcggcagtgacttcatcaattgtttgcctaatcttttaaatgtactccaagcataaggtatacgtgcgtgtgtttataagggtgagtatatgcacgttttgagcacctgcatttatattatatttgaaaaatatatttaacttttataataaaacagataatccgtaacaataataatccggcgaataatttattttgaatggccccgagatctttagcattctctgtttctttgtattttcgtctgagcgtaggtgtctggacaaagccgcaatcgtggaggccgacctggcggcggcgacgccaccggagcagccagtggcggcgctgacggtgacggaggtggaggaggcgaagatggtggtgaagctgctccccatctggtccacgagcatcctcttctggacggtctactcccagatgaccaccttctccgtcgagcaggcgtcgcacatggaccgccgcgccggcggcttcgccgtgccggcgggctccttctccgtcttcctcttcctgtccatcctcctcttcacctccgccagcgagcggctcctcgtcccgctcgcgcgccgcctgatgatcacacgccgcccgcaggggctgacctccctgcagcgcgtcggcgcggggctcgtcctcgccacgctcgccatggccgtctcggcgctcgtcgagaagaagcgccgcgacgcgtccggcggagccggcggaggaggcgtcgcgatgatcagcgcgttctggctggtgccgcagttcttcctggtgggcgccggcgaggcgttcgcgtacgtggggcagctggagttcttcatcagggaggcccccgagcggatgaagtccatgagcacgggcctgttcctcgccacgctcgccatggggttcttcctgagcagcctcctcgtgtccgccgtcgacgccgccacgcggggcgcgtggatccgggacggcctggacgacgggaggctggacctgttctactggatgctcgccgcgctcggggtggccaacttcgcggcgttcctggtgttcgcgagccggcaccagtacaggccggcgatactgcccgcggcggactcgccgccggacgacgagggcgcggtcagggaggccgcgacgacagtgaaagggatggacttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0464400, RefSeq:Os04g0464400