Os04g0464800

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0464800| Description = CRS1/YhbY domain containing protein| Version = NM_001059555.2 GI:297602872 GeneID:4336085| Length = 6724 bp| Defini...")
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Gene Name

Os04g0464800

Description

CRS1/YhbY domain containing protein

Version

NM_001059555.2 GI:297602872 GeneID:4336085

Length

6724 bp

Definition

Oryza sativa Japonica Group Os04g0464800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23609904..23616627

Sequence Coding Region

23609904..23610007,23610972..23611152,23611235..23611365,23611438..23611651,23611722..23611820
,23611922..23612044,23612135..23612254,23612335..23612394,23612480..23612772
,23613442..23613595,23613701..23614018,23614556..23614686,23614889..23615474
,23616013..23616627

Expression

GEO Profiles:Os04g0464800

Genome Context

<gbrowseImage1> name=NC_008397:23609904..23616627 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23609904..23616627 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcctcttcctcccccacccttccccacctctcctcccccccgccgcctcgagaacccgacccccgccgcgcctcctcctccctcccatccacgcctccccctcgccggagctcctcgccaagtcggctctccgccgcatctccgacaagctccgcagcctcggctacctcgaggccgaccacccggaggcggcccccggtccggcggcgccggaggcgggcgccggcgcgtcccccggcgagatattcgttcccacgccggcccagctcccgcgccaccgcgtcggctccaccctagacccgagctgggccacgggcgatggggagggggccgccgcgtctcgccgcaggaggcgcggcgggagggatagtagcgccgcggcgtcggcgccgccgtccgccgcggagctggcgctgccgagggacgagctgcggcggcttcagggggccgggattcggctgcggaacaggctcaaggtcgggaaggccggggtgacggaggggatcgtgaacgggatacacgagcggtggcgcaacgcggagctcgtgaagatcaggtgcgacgacgtctccgccatgaacatgaagcgcacgcacgagattctcgagagaaaaactggaggcttagtcatttggagatctggaagcaccatcatattatatagaggaactgactataagtatccttacttccatgatagagaaatgaagaatgacatggatgagtcatcagagcatacaagttctgatgacgaggacgcggatcttgctataatagcttccgaacaaagtggcagtgaagaggattctgataatcctgcagaacatggtagcaatcatactgaggagggcgatgatcttactagacggtttggtgttgatgcgcttgagggaaatttagacattggatctgcagagcaaagcattaacagtgctacaaaagatcagcaagcaatattacatacaagcactaatgtgtctcgtcctagcgagatcagtggtcgagctcggtcaaccttagttgctggtgttggttctccaaataagtttcggttacaattacctggggaggtcaaactcgcagaggaagctgacaaattattggatgggttgggtccacggttttctgattggtgggggtatgaccctcttccagtggatgctgatttgttgccagcaattgttcctggataccgacgaagtagtaaccttcaagggttggctgcatctatgatcaaactatgggaaagatgtgaggtagcaaaggttgcaattaagagaggtgcagagaacattgatagtgatctcatttctgagaaactgaagggcttgacaggtgggacccttttatcaagggataatgagtcaattgtattctacagagggaaagatttcctgcccacagctgtctctcttgcaatagaaaagcgtagaaagtatggcaattctacaatcagtaaccctaagcttaattttgacaaaagcacaccgcaaaattcttctaaactgaagatggctactgatgtctcactagatgggcatgaatgctatgaaaagaagcataaagatgaaactgcagtttcagataatagagcagaatctcttaatgtgtttgcccagaatgttgaggccagattatctcaggcaattgcagagaaagagaagactgaaaagcttattgaagagctagaaatgtcgtctgagccttctagagctgaaactagagaggttatctcagaagaggagaggtacatgttgaggaaagttggtttaaagatgaaatcattcttattgctaggaaggagaggagtttttgatggaactgttgaaaatatgcaccttcactggaagtaccgagaacttgtcaaaattatatgtaaagaacacaacattaaagatgttgaatatgctgctcgaactctagaggctgagagtggtggtatattggtggcagtggaaagagtgagcaaagcacatgcaattataatatatcggggaaagaactatcagaggccatcaactctcaggccaaaatctttgttaaataaaaaggatgctttgaagcgttctgtggagtatcagcgttataagtccctgaagcttcatgtgcttaatctttcaaagaatatagactacttgaaggatcagatgttttttaaacaaatggaggttcaacctgttactccaactaatggaatgaactcaggccaccacaaccaaggcattcttgatctcaatgttaattctggaacattagtggacaaaaaagaagaagtgtctgaagttcttcctgagtgtgccaagtcagtggttgtagagtgttcttcaggtgaaagtgaaacagagggaacctcagttttaaccaaatctggagttcccttggatgttatgcagaacaagttgttatgtttcagcaagcatacagatgatctgtctgaaactacaagttcctgtctgactgagagtacaagtacttcatctgagagtacacaccaaagtccacttagttcttctgtgatgcacaattcagatagtcacagagtaagtggctcaaaatttgtaggaacccttacacctgtacacgagctgaaattggatgagaaatcttctcagttgccttccgcagctgctccactttcaaaccgagaaaggctcatgctaaggaagcaagctctgaaaatgaagaaacggccagtactcgctgttgggaggaacaatgtcatcacaggagtcgcaaaagcaataaaaacacacttcaagaagcatcctcttgctattgtgaatatcaagaaccgagcagacggaactccaattcagcagttgatttcagaactagaggaagcaactggatcggttctagtgtcgcgggagcccaacaaagtgattttgtacaggggttggggagcagatgtggcccagaatagcttaagtggaaataatagtacagaacaagttgaaaaggaggtgatatcacctcagctcctggaagccgtcagattagaatgtggattacaccctggcaaacccaaccggccaaccctgaaaatgactggccttaaaaagccatgcttgaacccgatgaaagttcaggataagctgcagcacccacaattaaaagtttga</cdnaseq>

Protein Sequence

<aaseq>MLLLFLPHPSPPLLPPAASRTRPPPRLLLPPIHASPSPELLAKS ALRRISDKLRSLGYLEADHPEAAPGPAAPEAGAGASPGEIFVPTPAQLPRHRVGSTLD PSWATGDGEGAAASRRRRRGGRDSSAAASAPPSAAELALPRDELRRLQGAGIRLRNRL KVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLVIWRSGS TIILYRGTDYKYPYFHDREMKNDMDESSEHTSSDDEDADLAIIASEQSGSEEDSDNPA EHGSNHTEEGDDLTRRFGVDALEGNLDIGSAEQSINSATKDQQAILHTSTNVSRPSEI SGRARSTLVAGVGSPNKFRLQLPGEVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADL LPAIVPGYRRSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTGGT LLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKSTPQNSSKLKMA TDVSLDGHECYEKKHKDETAVSDNRAESLNVFAQNVEARLSQAIAEKEKTEKLIEELE MSSEPSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELV KIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSL LNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQMFFKQMEVQPVTPTNGMNSGHH NQGILDLNVNSGTLVDKKEEVSEVLPECAKSVVVECSSGESETEGTSVLTKSGVPLDV MQNKLLCFSKHTDDLSETTSSCLTESTSTSSESTHQSPLSSSVMHNSDSHRVSGSKFV GTLTPVHELKLDEKSSQLPSAAAPLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVA KAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGWGAD VAQNSLSGNNSTEQVEKEVISPQLLEAVRLECGLHPGKPNRPTLKMTGLKKPCLNPMK VQDKLQHPQLKV</aaseq>

Gene Sequence

<dnaseqindica>6621..6724#5476..5656#5263..5393#4977..5190#4808..4906#4584..4706#4374..4493#4234..4293#3856..4148#3033..3186#2610..2927#1942..2072#1154..1739#1..615#atgctcctcctcttcctcccccacccttccccacctctcctcccccccgccgcctcgagaacccgacccccgccgcgcctcctcctccctcccatccacgcctccccctcgccggagctcctcgccaagtcggctctccgccgcatctccgacaagctccgcagcctcggctacctcgaggccgaccacccggaggcggcccccggtccggcggcgccggaggcgggcgccggcgcgtcccccggcgagatattcgttcccacgccggcccagctcccgcgccaccgcgtcggctccaccctagacccgagctgggccacgggcgatggggagggggccgccgcgtctcgccgcaggaggcgcggcgggagggatagtagcgccgcggcgtcggcgccgccgtccgccgcggagctggcgctgccgagggacgagctgcggcggcttcagggggccgggattcggctgcggaacaggctcaaggtcgggaaggccggggtgacggaggggatcgtgaacgggatacacgagcggtggcgcaacgcggagctcgtgaagatcaggtgcgacgacgtctccgccatgaacatgaagcgcacgcacgagattctcgaggtgagcgctgccccgcgcatatgataatcgagtccagcgtaggtttgtagctgtgcgcctgtgcctcgcctagtaagtaaaacgttcagaaaatttggatgccggaaggcatcggagtgctactatatgttgaaattgcacagagtattagttgtatgttaattctgaatttcatcgcacaatgtgacagggtaagatgctgagtatagtaatatagtgctagcatatgattgtgcccacttcggaagtccctgttagcatggaaatggcagcatgtttattcaaaagggatacaactttgaagtgatcaaggattcaagatagggatattttatttttaattgtttgaaatgaatccatttagcagtgtactggcatgcacataatcattccttcttcgaagcattttattataccaaattccaaggcatttcttggattttctcttaaagtaatctatctcaatttttgttttagggcatttctatctcaacgcttttcagtttgcaattgacatgctcaatgtgtttttttatagagaaaaactggaggcttagtcatttggagatctggaagcaccatcatattatatagaggaactgactataagtatccttacttccatgatagagaaatgaagaatgacatggatgagtcatcagagcatacaagttctgatgacgaggacgcggatcttgctataatagcttccgaacaaagtggcagtgaagaggattctgataatcctgcagaacatggtagcaatcatactgaggagggcgatgatcttactagacggtttggtgttgatgcgcttgagggaaatttagacattggatctgcagagcaaagcattaacagtgctacaaaagatcagcaagcaatattacatacaagcactaatgtgtctcgtcctagcgagatcagtggtcgagctcggtcaaccttagttgctggtgttggttctccaaataagtttcggttacaattacctggggaggtcaaactcgcagaggaagctgacaaattattggatgggttgggtccacggttttctgattggtgggggtatgaccctcttccagtggatgctgatttgttgccagcaattgttcctggataccgtaggccttttcgtctgcttccttcaggagtaccaccgaggttaactgatagagaaatgacaatccttaggagactagctcgtcccctaccctaccattacgcacttggtaatttctagttatttgtcttgtataatatctttcatggctttgactttgataaggaccactgttatttactttcgtggtgtcatttatctaggacgaagtagtaaccttcaagggttggctgcatctatgatcaaactatgggaaagatgtgaggtagcaaaggttgcaattaagagaggtgcagagaacattgatagtgatctcatttctgagaaactgaaggtaggttggtaaagaacccagctatgaggaattaattgtagatatgtaattattcatagcatttgacatttctcgagcattcttgcgataaaacattgatgacattacagatttatctttcacgtgtcatcgaattttgaaatgtaaatcatttgcctgtattcctaatttcctatcataattgaagttgaaccatagcagcccagaatttttacatgttgaatcaaaatcacttctttttatgatatatgttccctcatactcatgcatattttacatgcagtatgaaggcacttaacaatagattcatattttttatgtgtcgccttgatttatgtggcaccaaatattaggaaaatacactttagtatctctttctgatgtgaaccatttcagcacaggctccaggccttcaacctattatatcctaaactttccattatgagaaattatcattacaatcatcagtttcaaaagaaaatcagagaggagggggggggggggttatgttccaccatgacattcttaatcttgcagggcttgacaggtgggacccttttatcaagggataatgagtcaattgtattctacagagggaaagatttcctgcccacagctgtctctcttgcaatagaaaagcgtagaaagtatggcaattctacaatcagtaaccctaagcttaattttgacaaaagcacaccgcaaaattcttctaaactgaagatggctactgatgtctcactagatgggcatgaatgctatgaaaagaagcataaagatgaaactgcagtttcagataatagagcagaatctcttaatgtgtttgcccagaatgttgaggccagattatctcaggtttgcttttcttttctagtagtgccatctcttgataattttgatttggtagtttgaaaagaaaaacacttgaaatagttaaattcatatagaaatattgttcaggcaattgcagagaaagagaagactgaaaagcttattgaagagctagaaatgtcgtctgagccttctagagctgaaactagagaggttatctcagaagaggagaggtacatgttgaggaaagttggtttaaagatgaaatcattcttattgctaggttagtattctcctcaaccttgtattgtgcagcatgcatctgttcagaagtcaaaatgctacctaatttgactaccaaattagttataggaaagtagattaccagacagtgttctccttggtgacccctaggcattcggtgtccgctccgcctaggtcagcaagctgatttttcccgcctaggaagcagttaggcactaggtcccacctatggccgtgccatgtgcctactgcctagcaccaagggaaacacttctatcagactgtaatattaccacttctagagttttcatctgtttagctcataccaagtggcattttaatccttgtaaatcctttttgtggagacagtgtgagtattatgtggttttttgttactttgggagtgcacatatttgaattagttcggtcatctgttgtgattcatcgcataacctccttttgtaccattctatacctgtacatgatttgactattattgcctttccaagcagtagcatccgcagccctaaggtcaataaacaaaaagagagcgcgacatacccatggactctatacaaactgttctttctgtgatttctgcacgatattgatacctcattcgcttgtatcttactgttttttattatttctttaattcaacatccttttttttttctattgattgcaggaaggagaggagtttttgatggaactgttgaaaatatgcaccttcactggaagtaccgagaacttgtcaaaattatatgtaaagaacacaacattaaagatgttgaatatgctgctcgaactctagaggctgagagtggtggtatattggtggcagtggaaagagtgagcaaagcacatgcaattataatatatcggggaaagaactatcagaggccatcaactctcaggccaaaatctttgttaaataaaaaggatgctttgaagcgttctgtggagtatcagcgttataaggtgaaactgaaacctattagcttgctgtggttcacttgtggagttattttttagatctcaaattaatattccttgtttattttagtccctgaagcttcatgtgcttaatctttcaaagaatatagactacttgaaggatcagatggtgagttttttgttcaatgctgagccttttccattcgttttgttgtaaatgctattattaatttactgatgatgcttcagttttttaaacaaatggaggttcaacctgttactccaactaatggaatgaactcaggccaccacaaccaaggcattcttgatctcaatgttaattctggaacattagtggacaaaaaagaagtaaattttattatcttaactgaagttccattatggctcaatatattcaatcatgtctgattatctgtttattaaatatatatggtcaaggaagtgtctgaagttcttcctgagtgtgccaagtcagtggttgtagagtgttcttcaggtgaaagtgaaacagagggaacctcagttttaaccaaatctggagttcccttggatgttatgcaggttgctggtcctcccattcctttacgaaaattcttgtgtgttttgattcttcgcaacaattttgtggtggactaatggttcattgcacattgtatttgcagaacaagttgttatgtttcagcaagcatacagatgatctgtctgaaactacaagttcctgtctgactgagagtacaagtacttcatctgagagtacacacgtgagtttattgttgatttttcccagtgcatggcaattattttctgctgatgctgatgatttgactgcagcaaagtccacttagttcttctgtgatgcacaattcagatagtcacagagtaagtggctcaaaatttgtaggaacccttacacctgtacacgagctgaaattggatgagaaatcttctcagttgccttccgcagctgctccactttcaaaccgagaaaggctcatgctaaggaagcaagctctgaaaatgaagaaacggccagtactcgctgttggtaagtctttgtccccaatacagtttacaccagatttcaattaatatgctgagcatccgattcctttcatagggaggaacaatgtcatcacaggagtcgcaaaagcaataaaaacacacttcaagaagcatcctcttgctattgtgaatatcaagaaccgagcagacggaactccaattcagcagttgatttcagaactagaggtttgtatagtctataacagggagtagttcaccccaaaaatactgaatcaatctgaaattctatattgttcaatggaatcaggaagcaactggatcggttctagtgtcgcgggagcccaacaaagtgattttgtacaggggttggggagcagatgtggcccagaatagcttaagtggaaataatagtacagaacaagttgaaaaggaggtgatatcacctcagctcctggaagccgtcagattagaatgtggattacaccctggtgaatcagagtagatggatctctagatcctgtagatggattatcttcatcgaattgcagttggtgaagttgtgctcgcgccttcaatgtccagattgcgttttccctcgtcgtttctgaccacagttttctggttggcctcctcttgacacagcccgttgacgcgctgttcaaattggaatgtagacacgaacattgttttatctgtagtgtctccttgtcaccttcctttgtaaatctaaaacatctgaaaggcctaactggataaatattcctgcaacctaaaatgggatgtcagtgtccggcaaacactagtgatgttatgccggaatctggcaaaaagttgtgaaagcgtgatgtaccctggaaccagaagaaacccgtgtgacggggcaaaaccttttggtagcatcagttgtcactgtttgaaaaaaaaagggcttctcgagcaggtacaatagcatactattagacagctataaatatattttaatgagataaaagatgaaagaaaagagcagtgggctatagatatgtagtcagcagtaacacggacttcaagacgtaacatgtgtattataggtgagaccatatattaatattatagtaagtaactattatatgaattggctattagatcggctataaataaattagagcagtagtgagctacactattaaacttgctctagcaggtaagcatgatgcgacaaaaagctacgggatttgtttcagcgctaaccgacaccaaaatctatcctgccgatcgcctgattgccccatatgtctaagcttgactgcaatgacttgcaatacacttgaaccggtcgaacaagctactttagcagatcacacgaaacatgcagatatgaaagtgtttcctttggtgtttttgtagctttacagccaagcttttgcaataatcttttgtttcatgaactaataatacctgctcgaatgacaggcaaacccaaccggccaaccctgaaaatgactggccttaaaaagccatgcttgaacccgatgaaagttcaggataagctgcagcacccacaattaaaagtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0464800, RefSeq:Os04g0464800