Os10g0108700

From RiceWiki
Revision as of 08:29, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0108700| Description = Transferase family protein| Version = NM_001070563.1 GI:115480869 GeneID:4347960| Length = 1628 bp| Definition = Or...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0108700

Description

Transferase family protein

Version

NM_001070563.1 GI:115480869 GeneID:4347960

Length

1628 bp

Definition

Oryza sativa Japonica Group Os10g0108700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:562032..563659

Sequence Coding Region

562246..563550

Expression

GEO Profiles:Os10g0108700

Genome Context

<gbrowseImage1> name=NC_008403:562032..563659 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:562032..563659 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtattgtggtgagcaagtcagcgccggtggtcgtccggccatcggagccggccacatcgacggccgacaagatccttctgtcaactttggacaagcctgttgccacgataccagtgaccgtgctacttgcgttcgaccaccccatccatgacgccaccgcggagaccatcaagacggctctcgctcaatcactcgtccactactatcctatcgccggccgcatttcctgcgacaatgacgacggcggccatttctacatcgactgcaccggcgaggatctcggggtcacgttcgtggccgcgtccgccaactgcaccatggaggagctcatgtgtctcgtcgacgaccaggctcccgacgacgagacagcggtggtgcagcagctcgccttcaactgcacgcccgacgaccttcatcaccgtctgctgtgggtgcaggtcaccactctcaactgtggaggcttcgtcgtcggggtgacatggagccatggcgtggctgacggtcccggcatagcacagttcatacaagccgtcggcgagctcgcccgtggcctgccatcgccgtccgtcgtcccggtcaggttggacgacaagatcgcaacccaagccgtacctcccttcaccatggccgttcatcgcttcatatccggcctcaagccagtatcaaacctcgacgtacgcaacgtcaccgtctcatctagccttatcaaccacatcatcgtcggagctcgtcgtcgtgccaccgtgttcgaggcggtcgccgccgtgctctggcagtgccgtacacgggtggtgatgacggatcctgaggcccccgccgtgctgctcttcgcggtgaacgcacgcaagtacctcggcgccaaggacggctactacggatgctgcaccgccatgcacatggccgtgtccaagtccggcacggtggccaacggcgacatcatgaagttggtcggcatcatacgccgcgccaaggagcagataccggagcagctgaaggcagacgacggcgagatgatgctacggacgatggtaggggagaagcaggtgaatggatacgagagcctgctctacttgacatcctggcgaaacatcgggttcgaggacgtcgatttcggcagcgggaagacggcgagggtgatgacctacccgccgaggatgctgtccatgatgcccaggattgcgcccatctgcttcatgctcaaggccacagaggaaggggtcagggtcatgtcagactgtgttacggctgaccacgccgatgccttctatcaagaaatagccaagctcaaagccaccacctga</cdnaseq>

Protein Sequence

<aaseq>MSIVVSKSAPVVVRPSEPATSTADKILLSTLDKPVATIPVTVLL AFDHPIHDATAETIKTALAQSLVHYYPIAGRISCDNDDGGHFYIDCTGEDLGVTFVAA SANCTMEELMCLVDDQAPDDETAVVQQLAFNCTPDDLHHRLLWVQVTTLNCGGFVVGV TWSHGVADGPGIAQFIQAVGELARGLPSPSVVPVRLDDKIATQAVPPFTMAVHRFISG LKPVSNLDVRNVTVSSSLINHIIVGARRRATVFEAVAAVLWQCRTRVVMTDPEAPAVL LFAVNARKYLGAKDGYYGCCTAMHMAVSKSGTVANGDIMKLVGIIRRAKEQIPEQLKA DDGEMMLRTMVGEKQVNGYESLLYLTSWRNIGFEDVDFGSGKTARVMTYPPRMLSMMP RIAPICFMLKATEEGVRVMSDCVTADHADAFYQEIAKLKATT</aaseq>

Gene Sequence

<dnaseqindica>215..1519#atatcgaccagtatatatgaaaagtcacggaggaggccagcagccagcagccagcagccagcaggtatgtatgtatgtgtgtttatagcaaatccgttatattatatggttgtaatctctatagtactagatctgtatgactactgtattaattatatgcttacgtgatcctaacttatcaatggtagaacacccagacggatattaatttagaatgagtattgtggtgagcaagtcagcgccggtggtcgtccggccatcggagccggccacatcgacggccgacaagatccttctgtcaactttggacaagcctgttgccacgataccagtgaccgtgctacttgcgttcgaccaccccatccatgacgccaccgcggagaccatcaagacggctctcgctcaatcactcgtccactactatcctatcgccggccgcatttcctgcgacaatgacgacggcggccatttctacatcgactgcaccggcgaggatctcggggtcacgttcgtggccgcgtccgccaactgcaccatggaggagctcatgtgtctcgtcgacgaccaggctcccgacgacgagacagcggtggtgcagcagctcgccttcaactgcacgcccgacgaccttcatcaccgtctgctgtgggtgcaggtcaccactctcaactgtggaggcttcgtcgtcggggtgacatggagccatggcgtggctgacggtcccggcatagcacagttcatacaagccgtcggcgagctcgcccgtggcctgccatcgccgtccgtcgtcccggtcaggttggacgacaagatcgcaacccaagccgtacctcccttcaccatggccgttcatcgcttcatatccggcctcaagccagtatcaaacctcgacgtacgcaacgtcaccgtctcatctagccttatcaaccacatcatcgtcggagctcgtcgtcgtgccaccgtgttcgaggcggtcgccgccgtgctctggcagtgccgtacacgggtggtgatgacggatcctgaggcccccgccgtgctgctcttcgcggtgaacgcacgcaagtacctcggcgccaaggacggctactacggatgctgcaccgccatgcacatggccgtgtccaagtccggcacggtggccaacggcgacatcatgaagttggtcggcatcatacgccgcgccaaggagcagataccggagcagctgaaggcagacgacggcgagatgatgctacggacgatggtaggggagaagcaggtgaatggatacgagagcctgctctacttgacatcctggcgaaacatcgggttcgaggacgtcgatttcggcagcgggaagacggcgagggtgatgacctacccgccgaggatgctgtccatgatgcccaggattgcgcccatctgcttcatgctcaaggccacagaggaaggggtcagggtcatgtcagactgtgttacggctgaccacgccgatgccttctatcaagaaatagccaagctcaaagccaccacctgattataactatatatgcgagctatctataccttcttcaatatgccaattatgatttatctacaataaaaatttgaatatatataccgtgcaagagcatgcatgaacaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0108700, RefSeq:Os10g0108700