Os04g0470100

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0470100| Description = Similar to Small GTP binding protein Rab2| Version = NM_001059583.1 GI:115458895 GeneID:4336117| Length = 2360 bp| ...")
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Gene Name

Os04g0470100

Description

Similar to Small GTP binding protein Rab2

Version

NM_001059583.1 GI:115458895 GeneID:4336117

Length

2360 bp

Definition

Oryza sativa Japonica Group Os04g0470100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23891481..23893840

Sequence Coding Region

23891620..23891665,23891770..23891909,23892329..23892411,23892556..23892760,23892842..23892910
,23893500..23893592

Expression

GEO Profiles:Os04g0470100

Genome Context

<gbrowseImage1> name=NC_008397:23891481..23893840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23891481..23893840 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtacgcctacctcttcaaatacatcatcatcggcgacacaggggtgggcaagtcgtgcctgctgctgcagttcacggacaagcggttccagcccgtccacgacctcaccatcggcgtcgagttcggcgcccggatgatcaccgtcgacagcaggcccgtcaagctccagatttgggacacggcaggccaggagtcattcagatcgataactagatcgtactacagaggggctgccggtgctcttttggtttatgacattacaaggagggagacattcaatcatcttgcgagctggctggaagatgcaaggcaacatgcgaatgctaacatgacaataatgcttgttggaaataaatctgatctatctcataggcgtgctgtgagctatgaggaaggcgagcagtttgcaaaagagcacggtctgatatttatggaggcgtctgcaaaaaccgcgcagaatgttgaggaggcttttgtcaagactgctggagcaatatacaagaaaattcaagatggtgtctttgatttatctaatgaggctaatggaatcaaacttggttacacggtcccgggccaatccggaggtgctggttcctcgtcttctcaagggggtggctgctgcagtagctaa</cdnaseq>

Protein Sequence

<aaseq>MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFG ARMITVDSRPVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE DARQHANANMTIMLVGNKSDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAF VKTAGAIYKKIQDGVFDLSNEANGIKLGYTVPGQSGGAGSSSSQGGGCCSS</aaseq>

Gene Sequence

<dnaseqindica>140..185#290..429#849..931#1076..1280#1362..1430#2020..2112#gtccacgtaaccctcctctcctctcctcgcctcgcctccctcccgacgaaggaaatcccaccctctccccgccccgcgaatccgccgcggtaaaccaccccccgcgccgccgccgccggtgcgggccgaggcggcgaagatgtcgtacgcctacctcttcaaatacatcatcatcggcgacacaggtccggcccccctcctccaacgacgagaaatctcgtttccctctatatgactgtgttgttgttgtgtctgatgatcgatggtggcggcgggggcgcgcgagcaggggtgggcaagtcgtgcctgctgctgcagttcacggacaagcggttccagcccgtccacgacctcaccatcggcgtcgagttcggcgcccggatgatcaccgtcgacagcaggcccgtcaagctccagatttgggacacggttggttataccccccgcctcgaactctctctgctgctgctactcgtgtagatcgattggatgatgtttctagcgtagccatctgttaccaagctgttcaattgaggcggagagtgcttggattggttaggtaaacttggattacttgtggcttttggtttgagattgaaaatgccattctagtttatggctttatgcgggcttcgccgttggtatgtactaccgataacctgaaattcagtttttaatcacatcactttctgtacagattagctctggatgagagagccaaaacgtgaggcttgaagttacattgtctatctgttattttgagttttccttgatacctataagatggcatgttcaattgtcaagttaaacattcatcttatgcttttgtggctctgacaacatttcaggcaggccaggagtcattcagatcgataactagatcgtactacagaggggctgccggtgctcttttggtttatgacattacaaggtttttacccaatctgtcaaagttgcttggtttatttctcaaaaaggaaaaaaaaaggggctttggtttgatttaagtgcatgatttccctttaaactttgctaacctgagtgatcacatatgtttacgttatactgacttcaggagggagacattcaatcatcttgcgagctggctggaagatgcaaggcaacatgcgaatgctaacatgacaataatgcttgttggaaataaatctgatctatctcataggcgtgctgtgagctatgaggaaggcgagcagtttgcaaaagagcacggtctgatatttatggaggcgtctgcaaaaaccgcgcagaatgttgaggaggtaaatgattttttcttatcggtgcatatgtgcaagtaagagctttctccagatgtttttcttatcccaactgttacacaggcttttgtcaagactgctggagcaatatacaagaaaattcaagatggtgtctttgatttatctaatgaggtaaagttttttaggaatgtatgtaatgtattgaggtaaatttacaaacacaaatcatattgttcttctgagcatgtctgatgtgaactagatcattatttatacaacataagtgtattcttaattaacatatgccctgcaaaactttcctgagaggaataactgaataagtagtagaaacagagtctgtaattaacttatgcactgcaaaaactttaacatggccctagaagcacacacaaaaaaaaactgtgtatacattttcaggtcaatgtttcctgtaattgaatggaataactgaacttgaaactgagtctgtaattaaaccgaaaatgatcgagggaccaaaaatggtcattttgcctcttttaatggcaaaaaaggagatgtattacaaaatgcctatcctcccaaagaaaaaaaaagaagaaaaggaggtgttttagatttctatattggtataggaatcaaatgagtgcaagagcactgctacattcttctcctcaagagagcacttgtgattgcttttggctactgtattgacatattgacctgagcatgagttttgtgtccttttaaaaatttgcaggctaatggaatcaaacttggttacacggtcccgggccaatccggaggtgctggttcctcgtcttctcaagggggtggctgctgcagtagctaatggaacgatatactcgggtgtctatcgtgtgtcacactgccacttacccttggaatcatcttcttgatgctgactgaaacgtagttgctccagtgttaacatgccaaaagactcggttcatttatgtctgctgtgcataaacagtagtctctagatttttttttacagcttcatgccacttggcatctaggaattcttattgtctgcatgtgtaattacaatagcaatgcatggtttgaatatttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0470100, RefSeq:Os04g0470100