Os04g0470200

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Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0470200| Description = Similar to Small nuclear riboprotein Sm-D1| Version = NM_001059584.2 GI:297602886 GeneID:4336118| Length = 2089 bp| ...")
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Gene Name

Os04g0470200

Description

Similar to Small nuclear riboprotein Sm-D1

Version

NM_001059584.2 GI:297602886 GeneID:4336118

Length

2089 bp

Definition

Oryza sativa Japonica Group Os04g0470200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23895823..23897911

Sequence Coding Region

23896064..23896125,23896214..23896405,23897552..23897628,23897769..23897782

Expression

GEO Profiles:Os04g0470200

Genome Context

<gbrowseImage1> name=NC_008397:23895823..23897911 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23895823..23897911 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagctcgtcaggtttctgatgaagctgaacaacgagacggtcaccatcgagctcaagaacggcaccgtcgtccacggaaccatcaccggtgtggatataagcatgaacacccacttgaagactgttaagctcacattgaaagggaaaaatcctgtaacccttgaccacctcagtgtgagaggaaacaacattcgctattacatcctccctgatagcttaaatctggaaactttactagtagaggataccccgagagtcaaggctaagaagccaactgcagggaaacctttggggcgtgggcgcggacgcggtcgtggccgtggtcggggccgggggcgctga</cdnaseq>

Protein Sequence

<aaseq>MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVK LTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGR GRGRGRGRGRGR</aaseq>

Gene Sequence

<dnaseqindica>1787..1848#1507..1698#284..360#130..143#ggcgtcttggccagatcaaattagggttttgctcctcccgctccgagaaagcgagcagctcgagctccgccgattcccacccgtggctcgtcgccgcctccgcctccgctcctccctcccgccgccaagatgaagctcgtcaggtgaggctccggttcttctccacttcgttctgtcccgtttcgtttccctgtgtgtcttccctttgctgatccgtatggtgcaaattttcccccgcgaatttttttggtgcggatttggggcgtggggggtttcgctgcaggtttctgatgaagctgaacaacgagacggtcaccatcgagctcaagaacggcaccgtcgtccacggaaccatcaccggtaagcttttcacctcgcccacaggccacaggtcgcaagtagggaatttttgaaaaatttaggggctctccctggtgcttgtgttcctaggatttattatgtgttccgattcgacatatggccatatgggagaacagttggatgtgtttgtgctgcattttgtttgtttgtgtggcacggttttctgatgcttttgcagtaacagtaggaattactacattatacttctaaaataatgttcttcagtttcatagatggtttgataaatatgaataatagtggaatgttcaacctgaaagtgtggtggcatggataagttggtgttgagaattcataatatgtgatgggatattctaatggacttggctgccaaattgggatatttctaacttatgttgaccctataatgagtatttttacctgtgtggtgtagcagtatgtcaagaatgatttcatataaaattacatttacatccgtaataccaaataaatgcattatcaagacattttgtggaggatttaacaaaactaatttgatgttgtagatgttgatgcatttttctgtaaacctggtcaaagtttgagaagtttgacttatgacaaaactaaacaccttacaatatgagatggaaggattaaataaatactacattgtattgctgaaataatgttcttttggttcatagatggtttgattaatgcgaattacatggggtttgtggacgttcatcaatctatctttttgtgagggtcattgctgagtgctgagtatcacagtttggggatggaattatttgagttctccctaggtctatcaattaaaaaaaaacagcctgaaagtgtaatcacatagataagttggtgttgagaattgaaagtatgcaacgggatgttctaatggaccgggctctaaaattacgatttttctaagctagcctcacctaacttttgttggccccataataagtctcctttacctatgtggtgtggctgtgtgtcaagattgattttatagacaataggaaacagagatgtttggatatttttcatgtttctagctttcttcatgttggttgaggtgtttttaggtggacaaggctgttatgtcctggaatgtttcaattctgattcatcaaccttttgcaggtgtggatataagcatgaacacccacttgaagactgttaagctcacattgaaagggaaaaatcctgtaacccttgaccacctcagtgtgagaggaaacaacattcgctattacatcctccctgatagcttaaatctggaaactttactagtagaggataccccgagagtcaaggctaagaagccaactgcaggtatgaaaaagttcccctacccatctagttttgagtttgatcgatacaagaactatcaattgacctaccaatcttcgtttgtaaccagggaaacctttggggcgtgggcgcggacgcggtcgtggccgtggtcggggccgggggcgctgagctttgttattccctgttttgtgaagctcttgcagtgcaaaagtatttcaattctattagaacagagatgccaatctcagtagttcttgctgtggaatcatcctggcatttgacctaatgttcatgtctatcaggttacatcattcataatgaacatgggcgatgccttttctcagaccttcgagattttaagtggtatgttgttagtttggttattttaatataattcttctgccttaat</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0470200, RefSeq:Os04g0470200