Os04g0470300

From RiceWiki
Revision as of 11:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0470300| Description = Protein of unknown function UPF0136, Transmembrane family protein| Version = NM_001059585.1 GI:115458899 GeneID:43361...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0470300

Description

Protein of unknown function UPF0136, Transmembrane family protein

Version

NM_001059585.1 GI:115458899 GeneID:4336119

Length

2581 bp

Definition

Oryza sativa Japonica Group Os04g0470300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23898572..23901152

Sequence Coding Region

23898839..23898929,23899020..23899060,23899138..23899184,23899318..23899485,23900017..23900221
,23900957..23901076

Expression

GEO Profiles:Os04g0470300

Genome Context

<gbrowseImage1> name=NC_008397:23898572..23901152 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23898572..23901152 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctggcggcgcagctctacggatcggcggcggcggccgcgtaccggagacttccactctacggagttccttcgtcatgccggtggccgcggactcctctcgccgctctcccgaagctttccatctccaccggtggaatgggtatgaatccgtttggtgttggtgctaaagtttcaataaaatgtacaaatgggaccactcaggttgatgagttaaacttcagatcaaatcaaactgaggaattagtagaaggagatgcagatactgttacccagaagaggagtgcaaaaatccatgatttttgccttgggatcccttttggtggtcttctattctgtatggggcttctaggatacattttttcaagaagtaccataagccttgttttaggtgttgcaccagggctcaccacgctctttcttggtaccctcagtcttaaattctggaggagtggaaaatccagtttcatatttatcttgggccaagcagcaatttctgctgttctagcatggaagtattcccatgcctacatcttgacaaatagaatcctcccctgggccttctatgcatctctgagcactgccatggcttgtttctacgcttatgtgctgctctccggaggaaatccaccacctaagaagaagatggcagcaactccatcatcatag</cdnaseq>

Protein Sequence

<aaseq>MALAAQLYGSAAAAAYRRLPLYGVPSSCRWPRTPLAALPKLSIS TGGMGMNPFGVGAKVSIKCTNGTTQVDELNFRSNQTEELVEGDADTVTQKRSAKIHDF CLGIPFGGLLFCMGLLGYIFSRSTISLVLGVAPGLTTLFLGTLSLKFWRSGKSSFIFI LGQAAISAVLAWKYSHAYILTNRILPWAFYASLSTAMACFYAYVLLSGGNPPPKKKMA ATPSS</aaseq>

Gene Sequence

<dnaseqindica>2224..2314#2093..2133#1969..2015#1668..1835#932..1136#77..196#acccttcaccctttctctcgcggctcgtttggttgggggaattttccaaggatcccgtttccgtttcgaggtgcccatggcgctggcggcgcagctctacggatcggcggcggcggccgcgtaccggagacttccactctacggagttccttcgtcatgccggtggccgcggactcctctcgccgctctcccgaaggtaaagccccgatccaagcggtaaaccctatctgtcagtgcagtgagtgatctggtgttctcgttcgctgcatgttcgatcattcaaggtgtcgtgttcgctgttgttggatgaaaagcattagatcccgaataggtgaacaaaatggttctttggtgatgttcaattggttaagctgctgatgtaaatttgacgaaataaacatgctactgttgtttgatgaagggtaaattttcttgtacggagttttgtttcttgagctcttattttctgatgtcctccgaacatgctaaggtatcaagtactccatctgtgacattatgtatccatgttctagttgaaaggaactcaagaagaaagaaagaaactatttttaatttcttttgaatgttctgttatcggaggaatactccatatttcaaggattacccgtgtaaataaatggattttcttggatgtattgcgagggatgcactttggcatggatcacctatgtaaataaatgggttttgttgcatgtatcgcgaggaatgcactttggcatctatactccaatttccccccttctggaaaatgcacatgataaagttttgatttaacctgtatatctatgtaggagcattccttgctaataaattttgcatggagtgtaattgtataactactagaattattttttttatcaaaacaattgaaagcaaaacagttaactgtttacctattatgttgcttcagctttccatctccaccggtggaatgggtatgaatccgtttggtgttggtgctaaagtttcaataaaatgtacaaatgggaccactcaggttgatgagttaaacttcagatcaaatcaaactgaggaattagtagaaggagatgcagatactgttacccagaagaggagtgcaaaaatccatgatttttgccttgggatcccttttggtaagtttgaatttcatgattgtagaaccctgatgtcaccacattgatttgcactagcagaactcatatattgtgatgtgttgttctttgcctccttgtttgataaagaagtgtacaaacaactaattgcaagcaaagatgagcttttaattgcataattgcctggaaatgctgtcacatgtttggtaccacaagtttcagaaacacctcagtttttattatgcagcaaagctcttgaagtttctattacattgatacgaggcatcagataaatagtcttgaatcagtggaaataatactgccattactgctctgtttcgttttcacacttaaatgttccttattccttgagtatttccaggcatgcagttatttttttctcagcaggttcatctttaacttttggcctgtaaattatgtggatataatggtgaaaatatcaattttgttatcttgattgtatctgcataacaaataacaaaaacacattcttttacgaggggagtaacaatgattcatatgatagtgcaggtggtcttctattctgtatggggcttctaggatacattttttcaagaagtaccataagccttgttttaggtgttgcaccagggctcaccacgctctttcttggtaccctcagtcttaaattctggaggagtggaaaatccagtttcatatttatcttgggccaagcaggtgggtccttgcctccttgggtcaagtatcactatactaagcctgctgttactaatatctgtactgaattaatgtaaccatgatcatacactcatacacatcactaattgaccagttctttgtgattttgcagcaatttctgctgttctagcatggaagtattcccatgcctacatcttggtaaccaccgttattaccttcccgttcttatgtagcgtaacatcttagttgcactgatctttattttgtttgtgcagacaaatagaatcctcccctgggccttctatgcatctctgaggtattgcgctctctattgttcatctgaagcccttctttttgggtagaagaggatatgatatattgctactctgtctccaaaatggtgcagcactgccatggcttgtttctacgcttatgtgctgctctccggaggaaatccaccacctaagaagaagatggcagcaactccatcatcatagagcaggatccaggcattttcttagtgattaacgcgacaggatgatttggcctttgtgccttttaatgctttgtctgcaagtataacagaattttgagttatcatcccatttgtatattccctaatcttacattctctgtggattttggttgttgtagcgtgaagctttttgaacaaataattctgcaggatggcaatccatccttactgaacattttgctctttttttttccctccaagagcataaataaaggatatgtgtttattt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0470300, RefSeq:Os04g0470300