Os04g0472200

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0472200| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001059594.1 GI:115458917 GeneID:4336128| Length = 1166 ...")
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Gene Name

Os04g0472200

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001059594.1 GI:115458917 GeneID:4336128

Length

1166 bp

Definition

Oryza sativa Japonica Group Os04g0472200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23998082..23999247

Sequence Coding Region

23998384..23999202

Expression

GEO Profiles:Os04g0472200

Genome Context

<gbrowseImage1> name=NC_008397:23998082..23999247 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23998082..23999247 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacgtaggcgagatttctgcagcgacgatggagctgaaatccgccgtgctcgccgtcgcggcgctgtgcctcgcgctcgcgctcctgctcccgcgcgtcgcgctgtcacagaggctagctacagcggacgcccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccgggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccagagccaggccaacgacaccgccgccggcgcccccggcgtcaccgtgttcgcccccgaggactcggcgttcgcggccgtcggcggcggcgccgcgctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccggtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgccggcgggcagcagtacgccgtgaacgtcactgacgccgccgggacggtccgcatccagtccggctgggccaccgcgaagctcgtcagcagcgtgtactcgacgtcgcccgtggcggtgtacgcgctgaacagggtgctgctgccggagcagatcttcccgaccgcccctaaggtcgcacccgtgccggccccggccccggcgccggtgcacggggacaaggcgaacgacggcgcaccgggcgcaggcgagcttggcgcctcggacgtcaagagttcgtcgtgccgggttggcgccgggcgccttctcgccatcttggctgtaatggtatccagtttttctgatgatatagtggtgtga</cdnaseq>

Protein Sequence

<aaseq>YVGEISAATMELKSAVLAVAALCLALALLLPRVALSQRLATADA PAPAPAPRHVDLAELLSLAGPYGTFLGYLTKTGVITTFQSQANDTAAGAPGVTVFAPE DSAFAAVGGGAALSNLTADQLRTLMLCHGVPRYHPLSSFSALAASGPAPTFAGGQQYA VNVTDAAGTVRIQSGWATAKLVSSVYSTSPVAVYALNRVLLPEQIFPTAPKVAPVPAP APAPVHGDKANDGAPGAGELGASDVKSSSCRVGAGRLLAILAVMVSSFSDDIVV</aaseq>

Gene Sequence

<dnaseqindica>46..864#ctcactcaggtggtgcagttgctggcgttgcacacgactacgtaatacgtaggcgagatttctgcagcgacgatggagctgaaatccgccgtgctcgccgtcgcggcgctgtgcctcgcgctcgcgctcctgctcccgcgcgtcgcgctgtcacagaggctagctacagcggacgcccccgcgccggcgccggcgccgcgccacgtcgacctcgccgagctgctctccctcgccgggccgtacggcacgttcctgggctacctcaccaagacgggcgtgatcacgacgttccagagccaggccaacgacaccgccgccggcgcccccggcgtcaccgtgttcgcccccgaggactcggcgttcgcggccgtcggcggcggcgccgcgctgtccaacctcaccgccgaccagctccgcacgctcatgctgtgccacggggtgccccggtaccacccgctctcgtcgttctcggcgctggccgcgtcgggcccggcgcccacgttcgccggcgggcagcagtacgccgtgaacgtcactgacgccgccgggacggtccgcatccagtccggctgggccaccgcgaagctcgtcagcagcgtgtactcgacgtcgcccgtggcggtgtacgcgctgaacagggtgctgctgccggagcagatcttcccgaccgcccctaaggtcgcacccgtgccggccccggccccggcgccggtgcacggggacaaggcgaacgacggcgcaccgggcgcaggcgagcttggcgcctcggacgtcaagagttcgtcgtgccgggttggcgccgggcgccttctcgccatcttggctgtaatggtatccagtttttctgatgatatagtggtgtgatttttttttttttggcgtgggtacatatatacagtacttccctcgtttcataatgtaatactttctaccattaaccacattcatttagatgttaatgaatctagacatatgcatgtatttagattcattaacatttatatgtatgtgggcaatggtaaaaagtcttacattgtgaaacggagggagtaatgtttatgttttttgtcaattcgtttgtcgcatctctgtatgtaaacattcattttgcatgaacatatctgcaaataacattttctggcagtttaaacgaaataagattctac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0472200, RefSeq:Os04g0472200