Os04g0472500

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0472500| Description = Protein kinase-like domain containing protein| Version = NM_001059597.2 GI:297602893 GeneID:4336131| Length = 3052 b...")
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Gene Name

Os04g0472500

Description

Protein kinase-like domain containing protein

Version

NM_001059597.2 GI:297602893 GeneID:4336131

Length

3052 bp

Definition

Oryza sativa Japonica Group Os04g0472500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24025275..24028326

Sequence Coding Region

24025275..24027525,24027821..24028326

Expression

GEO Profiles:Os04g0472500

Genome Context

<gbrowseImage1> name=NC_008397:24025275..24028326 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24025275..24028326 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccaccgccgccgccgccaacctcctcctcttctcagccgtgttgctcctcgccacgccgtcgaacgccgcctcggcggcagcgccggcggtggcggcgatgccggtgcagccgcaggagctgctgctcagcttcaggtcctccctgaacgacccgtccggtgccctgtcgacgtggtcgcgctccacgccgtactgcaactggtcgcacgtcacctgcaccgccggcggcggcggcggcggcgtcgcggtcggcctgtcgctgcagggcctcggactctccggggacatcgccgccgagccgctgtgccgggtgccggggctggcggcgctcagcctcgcgtcgaacaccttcaaccagaccgtcccgctgcagctgtcgcggtgcgcgttgctcgtgtcgctcaacctcagctccgcggggctctggggtccgctccccgaccagctcgccatgctcgcctccctcgcgtcgctcgacctcagcggcaacgacatcgagggtcaggtgccgcccggcctcgccgcgctgcgggggctccaggtgctcgacctcggcggcaaccgcctctccggcgtgctccacccggcgctgttccgcaacctcacgaagctgcacttcctcgacctgtccaagaaccagttcctggagtccgagctgccgccggagctcggcgagatggccggactcaggtggctcttcttgcaggggtcagggttcggcggcgcgatccccgagacacttctccagctggagcagcttgaggttcttgacctctccatgaacagcctcaccggagctctgccaccggcgttcggccacaacttccggaagctgctgtccctcgacctctcgcagaatggcttctccgggccgttccccaaggagatcggcaagtgcgtgatgctgcagaggttccaggtgcagggcaacgggttcaccggcgagctccccgccggcctctggtcgctgccggacttgcgggtggtccgcgccgagagcaaccgcttctccggccggctccccgagctgtccgcggcggcgtcccggctcgagcaggtgcaggtcgacaacaacagcatctccggcgagataccccggagcatcggcatggtccgcaccatgtaccggttcaccgcctccgcgaaccggctcgccggcggcctgccggacaccctctgcgactccccggcgatgagcatcatcaacgtctccggcaacgcgctctccggcgcgatcccggagctcacgaggtgcaggaggctggtgtcgctgtcgctgtcgggcaacgcgctcaccggcccgataccggcgtccctcggcggcctgccggtgctgacgtacattgacgtgtccagcaacggcctcaccggcgccatcccggccgagctccagggcctcaagctcgcgctgctcaacgtctcctacaaccacctcaccggccgcgtcccgccgtcgctggtctccggcgccctccccgccgtgttcctccagggcaaccccggcctgtgcggcctgccggcggacggcggctgcgacgcgccggccgcgccgccgtcgagaaaccgcctcgcgctggccgcaaccgtggcgtccttcgtcaccggcgtgctgctgctgctggctctcggagcgttcgccgtctgcaggaggctgcacgccgccgccaagctggtgctcttctacccgatcaagatcaccgccgacgagctgctcgccgcactccgcgacaagaacgccattggcaggggagcattcggcaaggtctacctgatcgagctgcaagacgggcaaaacatcgcggtcaagaaattcatatgctcaagcaaccaaacattcggagcagtgaagaatcacatgaaaactttcgcaaaaatccggcacaagaacattgccagattgctgggcttctgctacgactcccatggcggcggcggcgaggtgagcgtcatctacgagcacctgaggatggggagcttgcaggatctgatacgcgcgccgaagttcgcggtggggtggaacgacaggttgaggatcgcgatcggagtagcagaagggttggtgtaccttcaccgtgattacactcctcgctttctgcatcgcgatctcaagtcgagcaatgtgttgctgggtgatgattttgagcccagagttaccggatttgggatcgatcgtgtcgttggcgagaaggcgtatcgatcttcgttggcttctgatctgaattacagctgctacatcgctccagttatacatttcacccagaagcagaatttcattaggatagctatttccacagcagaattgcactcaagatttcataaaactctggctctctgcgcacttatcccactgaagttgtttgctcttttgctgaaaccagaggtaaactgcaccaagaaaccaacgcacctcatggacgtgtacagcttcggcgtcatcctcctggagctgatcaccgggaagccggcggggcagccggcgtcggacgactcggtggacatcgtccggtgggtgcggcggcgggtcaacgtggccggcggcgcggcgcagatactcgaccccgccgccgccgtctcccacgcggcgcagcaggggatgcaggcggcgctggagctcgccctgctctgcacctcggtgatgcctgaccagagaccggccatggatgaggtcgtccggtcgctgcagctgctgcattcgccgcagactctgccgccaccgccgccgttcaccggagttgctgtggaaccttga</cdnaseq>

Protein Sequence

<aaseq>MATTAAAANLLLFSAVLLLATPSNAASAAAPAVAAMPVQPQELL LSFRSSLNDPSGALSTWSRSTPYCNWSHVTCTAGGGGGGVAVGLSLQGLGLSGDIAAE PLCRVPGLAALSLASNTFNQTVPLQLSRCALLVSLNLSSAGLWGPLPDQLAMLASLAS LDLSGNDIEGQVPPGLAALRGLQVLDLGGNRLSGVLHPALFRNLTKLHFLDLSKNQFL ESELPPELGEMAGLRWLFLQGSGFGGAIPETLLQLEQLEVLDLSMNSLTGALPPAFGH NFRKLLSLDLSQNGFSGPFPKEIGKCVMLQRFQVQGNGFTGELPAGLWSLPDLRVVRA ESNRFSGRLPELSAAASRLEQVQVDNNSISGEIPRSIGMVRTMYRFTASANRLAGGLP DTLCDSPAMSIINVSGNALSGAIPELTRCRRLVSLSLSGNALTGPIPASLGGLPVLTY IDVSSNGLTGAIPAELQGLKLALLNVSYNHLTGRVPPSLVSGALPAVFLQGNPGLCGL PADGGCDAPAAPPSRNRLALAATVASFVTGVLLLLALGAFAVCRRLHAAAKLVLFYPI KITADELLAALRDKNAIGRGAFGKVYLIELQDGQNIAVKKFICSSNQTFGAVKNHMKT FAKIRHKNIARLLGFCYDSHGGGGEVSVIYEHLRMGSLQDLIRAPKFAVGWNDRLRIA IGVAEGLVYLHRDYTPRFLHRDLKSSNVLLGDDFEPRVTGFGIDRVVGEKAYRSSLAS DLNYSCYIAPVIHFTQKQNFIRIAISTAELHSRFHKTLALCALIPLKLFALLLKPEVN CTKKPTHLMDVYSFGVILLELITGKPAGQPASDDSVDIVRWVRRRVNVAGGAAQILDP AAAVSHAAQQGMQAALELALLCTSVMPDQRPAMDEVVRSLQLLHSPQTLPPPPPFTGV AVEP</aaseq>

Gene Sequence

<dnaseqindica>1..2251#2547..3052#atggcgaccaccgccgccgccgccaacctcctcctcttctcagccgtgttgctcctcgccacgccgtcgaacgccgcctcggcggcagcgccggcggtggcggcgatgccggtgcagccgcaggagctgctgctcagcttcaggtcctccctgaacgacccgtccggtgccctgtcgacgtggtcgcgctccacgccgtactgcaactggtcgcacgtcacctgcaccgccggcggcggcggcggcggcgtcgcggtcggcctgtcgctgcagggcctcggactctccggggacatcgccgccgagccgctgtgccgggtgccggggctggcggcgctcagcctcgcgtcgaacaccttcaaccagaccgtcccgctgcagctgtcgcggtgcgcgttgctcgtgtcgctcaacctcagctccgcggggctctggggtccgctccccgaccagctcgccatgctcgcctccctcgcgtcgctcgacctcagcggcaacgacatcgagggtcaggtgccgcccggcctcgccgcgctgcgggggctccaggtgctcgacctcggcggcaaccgcctctccggcgtgctccacccggcgctgttccgcaacctcacgaagctgcacttcctcgacctgtccaagaaccagttcctggagtccgagctgccgccggagctcggcgagatggccggactcaggtggctcttcttgcaggggtcagggttcggcggcgcgatccccgagacacttctccagctggagcagcttgaggttcttgacctctccatgaacagcctcaccggagctctgccaccggcgttcggccacaacttccggaagctgctgtccctcgacctctcgcagaatggcttctccgggccgttccccaaggagatcggcaagtgcgtgatgctgcagaggttccaggtgcagggcaacgggttcaccggcgagctccccgccggcctctggtcgctgccggacttgcgggtggtccgcgccgagagcaaccgcttctccggccggctccccgagctgtccgcggcggcgtcccggctcgagcaggtgcaggtcgacaacaacagcatctccggcgagataccccggagcatcggcatggtccgcaccatgtaccggttcaccgcctccgcgaaccggctcgccggcggcctgccggacaccctctgcgactccccggcgatgagcatcatcaacgtctccggcaacgcgctctccggcgcgatcccggagctcacgaggtgcaggaggctggtgtcgctgtcgctgtcgggcaacgcgctcaccggcccgataccggcgtccctcggcggcctgccggtgctgacgtacattgacgtgtccagcaacggcctcaccggcgccatcccggccgagctccagggcctcaagctcgcgctgctcaacgtctcctacaaccacctcaccggccgcgtcccgccgtcgctggtctccggcgccctccccgccgtgttcctccagggcaaccccggcctgtgcggcctgccggcggacggcggctgcgacgcgccggccgcgccgccgtcgagaaaccgcctcgcgctggccgcaaccgtggcgtccttcgtcaccggcgtgctgctgctgctggctctcggagcgttcgccgtctgcaggaggctgcacgccgccgccaagctggtgctcttctacccgatcaagatcaccgccgacgagctgctcgccgcactccgcgacaagaacgccattggcaggggagcattcggcaaggtctacctgatcgagctgcaagacgggcaaaacatcgcggtcaagaaattcatatgctcaagcaaccaaacattcggagcagtgaagaatcacatgaaaactttcgcaaaaatccggcacaagaacattgccagattgctgggcttctgctacgactcccatggcggcggcggcgaggtgagcgtcatctacgagcacctgaggatggggagcttgcaggatctgatacgcgcgccgaagttcgcggtggggtggaacgacaggttgaggatcgcgatcggagtagcagaagggttggtgtaccttcaccgtgattacactcctcgctttctgcatcgcgatctcaagtcgagcaatgtgttgctgggtgatgattttgagcccagagttaccggatttgggatcgatcgtgtcgttggcgagaaggcgtatcgatcttcgttggcttctgatctgaattacagctgctacatcgctccaggtaagcgtatcattcatacagttcagtccatgcaaccagttcaggacagtgtggatataatgcagttatgatcttcagaagtacgccatccgtttcagattataagtcaaagtcaaactcttcaaatttaatctaagttttatataaaaaatagtaacaaacttcaaacagtttgattttggccaaagttgaaacgacgacttataatcttaaatagagggagtgtatttttttgaacgaattcttcagaagtatttttggtacttaggcatcatcagctcgtttgtgttttcagttatacatttcacccagaagcagaatttcattaggatagctatttccacagcagaattgcactcaagatttcataaaactctggctctctgcgcacttatcccactgaagttgtttgctcttttgctgaaaccagaggtaaactgcaccaagaaaccaacgcacctcatggacgtgtacagcttcggcgtcatcctcctggagctgatcaccgggaagccggcggggcagccggcgtcggacgactcggtggacatcgtccggtgggtgcggcggcgggtcaacgtggccggcggcgcggcgcagatactcgaccccgccgccgccgtctcccacgcggcgcagcaggggatgcaggcggcgctggagctcgccctgctctgcacctcggtgatgcctgaccagagaccggccatggatgaggtcgtccggtcgctgcagctgctgcattcgccgcagactctgccgccaccgccgccgttcaccggagttgctgtggaaccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0472500, RefSeq:Os04g0472500