Os04g0474300

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Revision as of 11:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0474300| Description = Glycoside hydrolase, family 1 protein| Version = NM_001187050.1 GI:297723230 GeneID:9269478| Length = 6227 bp| Defi...")
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Gene Name

Os04g0474300

Description

Glycoside hydrolase, family 1 protein

Version

NM_001187050.1 GI:297723230 GeneID:9269478

Length

6227 bp

Definition

Oryza sativa Japonica Group Os04g0474300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:24114046..24120272

Sequence Coding Region

24117912..24117997,24118075..24118144,24120065..24120232

Expression

GEO Profiles:Os04g0474300

Genome Context

<gbrowseImage1> name=NC_008397:24114046..24120272 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:24114046..24120272 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggttgccggggcagtggcgatgtccggcggtattctcctcctcctcctcctcctcctcctcctcctagctgccgcctgcgtcgaagccggcgagctgccgccgattagccggagaagcttccccaaggggttcatcttcgggacgtcctccgcgtcctatcagtgcgagggtggagcagcagaggggggcagaggaccaagcatctgggacaccttcacatatcagcatccagataaaatcgctgacaaaagcaacggggatgtggctgacaacacctaccatctctacaaggtattagcaattaccatttttaagtag</cdnaseq>

Protein Sequence

<aaseq>MAVAGAVAMSGGILLLLLLLLLLLAAACVEAGELPPISRRSFPK GFIFGTSSASYQCEGGAAEGGRGPSIWDTFTYQHPDKIADKSNGDVADNTYHLYKVLA ITIFK</aaseq>

Gene Sequence

<dnaseqindica>2276..2361#2129..2198#41..208#actctttcttttgcagaattgcaggtcaagcttcgttcagatggcggttgccggggcagtggcgatgtccggcggtattctcctcctcctcctcctcctcctcctcctcctagctgccgcctgcgtcgaagccggcgagctgccgccgattagccggagaagcttccccaaggggttcatcttcgggacgtcctccgcgtcctatcaggttaggcttcccttccgcatcattcttcctacaagagatcaagaacaatttgataagactgccgccttaactgaattcttgcaagaacatcggttggaacagactgttcttttcaaaaggaagaaagaaaaaaagctggaacagactatacacaagtaacacatgaaaaaaaaggagcagcttaagatgaactgtgcaaataatgctcaaattactccgaaaatggttctcgaatttgcatgtggctagaaattcaaggcgaaatctaaacatctagaaaaacctccgcgtcgctctcgcacgggcggctcgggggcgaaaaccctagctgcccgcgccgccactccgcctcctccacctcgccgcccccggagctcgccggcgggaaagctgccagcgagcagggaaggcggcggcgaggcacatcaactcgacggcctccacctcggcgcgacgaggacaggggaacgacgaagctctccgccgcggtcagaggcggagacggtggggctgcttggagaggcggtggatccggcttctttgaggccggatttggccctccgacgcctggatctggccggagcagctgctccggcgtggcggcgcgaggcagctggccggcctgggcatgttggcggcgtgaggtggctcggcggcgtgcggcctgcctgggcgtgaatacggcgcgagctgcggcggcggctcggcagcggctcggcagttgggaacggcggcggcgtagcctgcccgggcgcggagacggtgcgagcggcggcggctcggcggctaggaacggcggcggcgtggccggcccggagctacgggctgggagcgggcggcagcatggcgctggtgcggctgcccgggcgcagcggcggcgtgccgcggctcggctgtgcggccgcgagcagccccatggcgcggccagtcctcggctgccggggtgccgccgcgatgccctgcggccgggtgggtggcgtggcgtggccaggtggggcgcggcggccgggcaacaggggcgccggagccggaggggtagtagcttcaccggcgtcggcgtaggcctagaaggcagtgcaaagggagctggcagtggtggatcgtcttcctcgttaccggtcggcaccctcgccctttctggagctcctccccttctttgcggggagtttctgggttggattgaggcggcagcttgtcagcgggggaagcttaggttgccgaaactatggcacccagtcccgggttctccttctgccagatctagcaaggaggctggcgggtggtggaacagaggggtcctgggccagctctcagggatggtggttcgttggcggaagccatgtgccaccgatgtttagatggtggattcggattgggcaacggaccacagcggtagggggtttccgagcgaaagcttagcccaattctttgggccaacagtgactacgtcttcgggcgtggtaaccctcctgagggcattgttgaggtatccctcctaaggagctctgggtgaaaacattgtccagttctttggacggatgatgacggcgtctttcggcgtcgtgaccctcgtgagggcttcgttttagagtcttcgtgtcgtcgtggtgttgttggtccagtggcgatcggtctcacatagcgatggccggttcggtgcttggcttccctcactgtagcgtgtgtttgggcggttggcacatggttcagggcgtgtactctggtgcacatccttcctcaacagccagccgtcgatgtaaaacttttcttgtaaccttttcttcttatcttaattatattgaatgacctccttcggtcattccagcaaaaaaaaatctaaacatccaataagcattcagtggtcaattaactgtttcgggtctgaaacctgaagaatcggccgttgcttcacacatgcagtgcgagggtggagcagcagaggggggcagaggaccaagcatctgggacaccttcacatatcagcatccaggcatgtttaactgtaaatgacaagaatgaaaaagcaataaggcattattttgaattgaccattatctaatatggcagataaaatcgctgacaaaagcaacggggatgtggctgacaacacctaccatctctacaaggtattagcaattaccatttttaagtagccgtcctgggcattttttaacaggcattttgtaaggactttcaataaatatgcactccatgtttctgttagtttctttgtttctatcagataaaagatataccacatgtcagtctgcctatggcgcgatcgcttcagagatcaattctaagtttcattggaaggactagttcagtactcacatcctgaaaaattgcaggaagatgtgcacatgatgaaggagatgggaatggatgcatacaggttttccatctcatggtcaagaattcttccaagtgcgtgatacacctaatatatactataatgcactgtcacgcataacaaatatatagcttatctgaagatgttctcatttttcttcgaagtacaatattttgcatatctttttcaatctccaaggtgatcccacaaggaattaaaatctcactgtcatggcagatggaagtctgaatggtggagtcaacatagaaggcatcaactactacaacaatttgatcaatgagctattattgaaaggcattcatgtctaatcttcactgtttagtttcaagttcagtggctagatgcaacttgtggaaaccattagctccatcccttggtatgccagatttccttttccaaaatgcaaaataatcttaatacatttgcaggggtccaatcatttgttacccttttccattatgacacacctcaggcactggaagataaatacaacggatttcttagccctaatatcatgtaagtcaacaattcttcagtaccatttgctacttaattatattacaagttaaatctggaaaagttaaattggggtctgacctggttagtaaacacaacccagtaagataggagagtgtctacagctgaataatgttttccataaatactagggaccatgttatatacttcagaaaaatattgtccacgtcatcatgcatatcaattaaaatacccaatatttcaatgccaaaagcctttggagttcccttccccattttcttgtgaatattgtttactgtgatttgttgaaggacaagatttaacccttgttgcatcgacaccatccacattagtgttcccttcatatagtattttcagctaaaacatcctagtgttatttgccatgaaaaaagtgctaaagttactgactgtgaagaactattgcagaaatgactataaggactatgctgaaatctgcttcaaagagtttggtgaccgagtgaaacattggatcaccttcaatgagccttggatcttctgctctaaggcctatgcatctggcacctatgccccgggccggtgttcaccctgggagatgggaaaatgcagcgttggagattcaggaagggagccttacactgcatgccatcaccaactacttgcccacgcagaaactgttcggttgtacagagagaaatatcagttcactgaagaagttgtcaggcagtcgcagttcatccatgataatgatttacatcgaagatccgcaaagttaagtttcataatccaaaattacttattgcttggcattcactttcagccaggtcctggtggtagagtttgccagtacagacattaacctttactagtagtagttgataaggaaaaaaaggaaagaaattctagaattcacaaaaaaaacaataaaaattggcacttaatcccaatgtgttatgtgccctagttagagaggtcaaaataggtcagagaaaatatttatgtattatacaagaccttctcacataaaaacaaaacatcatgccttaatctcggtcctcctaatacaaaggtctggatctgttggttaggttaaagatatactcctattattttattattttcatgctaaattcaatgaaagactttagagttgataagaaaagcaataaattcataaaaagcaaaacatctcccattaagttatcttcaaattcaaacacatatcagtatccaacatcacaaatgtttctgatagctagctcacaatttctgcgggtaacttgactagctaattactttattaactgcagcgctaatttatatcctgcatattatgaaatggagacatgcatattctagtccagtgatatattcaaagcttctgcaatttactgctacatgataatacgttcaaggccttataatttgaacatgattgttatacatttgttgttaatattatttttagggaacacaaaacctttgaccatgcatgcagattgaatgcttagtagaatcaattctgtttttcaaatcaaaaggaacaacaaaatgcttgacaaatgcaggccttacaaaaggggaagattggaataattgtgaactcacagtggtatgttcccttctccccatccaaaaccaacaaggatgcagcaagacgtgttctagatttcgtgcttggatggtaaattctttgtcacacataatttcttcattaggagactgaaaattctaactatgaaatcctttctaggcttatggatcctctcattagaggggactaccccctaaacatgagagaattggttggaaatcgcttgccaaagttcaccaaagagcaatctgaaatggtcaagggtgcatttgatttcattggacttaattactactcttcaagctatgctgagaatgttcttccatcgtatggtcttaagaacagctacaatactgatttccacgctaggattaccggtgagtcaacatattctgggatcagtcaacttcttttgtgcgtttgaaccatgaaatataaacatatggcaatttttttggaattttggatacatgcattttgtagcttttttttttgctactaggtgctaaccttgcccaattatgctaggtagtcgaaacggtactctcattggtcctcaggtgacctacagctttgttacccacaaaacaaattattagtaaaagtgcaaaacaatgatcaggtgacatgattgaactctataaacaatatgtgtgtaggctgcttcatcttggcttcatatataccctcaagggctccgtgaattgttgctttatatcaaggaaaactacggcaatcctaccatctttattactgaaaatggtaagttcccacaaacatataggtcatacaatttctccgcatttgttcaaaccaacactactataacaccttctgattcttctttctattttcctattttctccccaatctagccagtaagtgcacataggacttgaatattttttcttctcctatctatgtgagagagagagagagagttctcctctagcttctaactaaaagtgtatgaatcttactgatcctttgtactcgtacatctcaaggtgttgatgaagtcaataacaagaccatgccactcaaggaggccctgaatgataatacgaggatagaatattatcacaagcaccttctcgccctgcgaaatgctatgaggtcagaacatcaattcagacactcagctatcagtagacaacttaaagatggtactaacactgcattattccatatgcctccacagggatggagcaaacgtgaaggggtactttgcatggtctctgcttgacaactttgagtgggcggatggctacacactccggtttgggctaaactttgtggattacgatgatgggatgaagagacaccccaagaattcagcccattggttcaagaagttcctccgagaaatgaaacagggatgaaaagagtcgcacgcattgccttcttttttttcattgaacatcgaaattgagtgtcacagatgaaatgagtttgagatgtgcttctttgtttaggctatacaagagtaaacttcacaaaactacacgttttgttgtccaagttacaataaaaccacacaaattattagaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0474300, RefSeq:Os04g0474300